SRR1527453_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527453_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3327048
Sequences flagged as poor quality	0
Sequence length	50
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	76740	2.3065492292266296	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG	44054	1.324116754552384	No Hit
GCGAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT	14025	0.4215448649974392	No Hit
GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC	10449	0.314062195676167	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTG	8524	0.2562030965588714	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTG	7692	0.2311959430702533	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC	7120	0.2140035250468283	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT	6608	0.198614507515371	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC	6009	0.18061055927056058	No Hit
GCGAATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	5894	0.17715404166095589	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG	5357	0.1610136072578454	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGC	3814	0.11463615793941054	No Hit
GCGAATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT	3787	0.11382462771802511	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGT	3743	0.11250213402391548	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTG	3553	0.10679136579935125	No Hit
GCGAATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA	3330	0.10008872730420482	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGAATG	343110	42.464344	1
CGAATGG	341990	42.461884	2
GAATGGG	339300	42.352432	3
AATGGGA	97725	42.32735	4
AATGGGG	183520	42.254578	4
AATGGGC	37410	42.147552	4
ATGGGGG	84280	42.141434	5
ATGGGAT	28435	41.887814	5
ATGGGAG	31320	41.82248	5
TGGGGGG	52930	41.788776	6
ATGGGGC	31800	41.703144	5
ATGGGGA	42340	41.422768	5
CGAATAG	1315	41.155895	2
ATGGGGT	27335	41.078472	5
ATGGGAC	15045	40.943832	5
AATGGGT	22175	40.69628	4
ATGGGAA	25120	40.584393	5
ATGGGCA	19955	40.560257	5
GCGAATA	1400	40.54286	1
CGAATGA	1005	40.49751	2