SRR1527452_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527452_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2855702
Sequences flagged as poor quality	0
Sequence length	52
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	66502	2.328744385793756	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	36849	1.2903657314383643	No Hit
GCGAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	11847	0.4148542109785965	No Hit
GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA	10270	0.35963136209590496	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT	7610	0.26648438807690716	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCT	6812	0.23854029587120784	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC	6002	0.21017599175264084	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC	5726	0.2005111177566847	No Hit
GCGAATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT	5301	0.18562861250928844	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC	5014	0.17557854425987024	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT	4634	0.1622718336857277	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC	3389	0.11867484772570808	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGTTC	3364	0.11779940624056713	No Hit
GCGAATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC	3216	0.11261679264853265	No Hit
GCGAATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT	3177	0.11125110393171278	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGCT	3077	0.10774933799114893	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGATAG	35	1.02028935E-7	45.999996	37
GCGAATG	294690	0.0	44.32899	1
CGAATGG	293820	0.0	44.310734	2
GAATGGG	291420	0.0	44.189487	3
AATGGGA	83695	0.0	44.11482	4
AATGGGC	31810	0.0	44.083935	4
AATGGGG	157680	0.0	44.059994	4
ATGGGGG	71815	0.0	43.908653	5
CGAATAG	1240	0.0	43.774193	2
ATGGGAG	26875	0.0	43.74921	5
ATGGGGC	27420	0.0	43.57586	5
ATGGGAT	24285	0.0	43.480747	5
TGGGGGG	45560	0.0	43.299164	6
ATGGGAC	13065	0.0	42.989666	5
ATGGGGT	23380	0.0	42.911037	5
ATGGGGA	37265	0.0	42.827583	5
ATGGGCA	16685	0.0	42.801918	5
ATGGGCT	9190	0.0	42.69641	5
AATGGGT	19680	0.0	42.470528	4
CGAATGA	820	0.0	42.35366	2