##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527452_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2855702 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7641693706136 33.0 31.0 33.0 30.0 34.0 2 32.23105141923072 34.0 31.0 34.0 31.0 34.0 3 32.811055215145 34.0 31.0 34.0 31.0 34.0 4 34.96076866563808 35.0 35.0 37.0 33.0 37.0 5 35.58791568588039 37.0 35.0 37.0 35.0 37.0 6 35.95278183788084 37.0 35.0 37.0 35.0 37.0 7 36.483820790824815 37.0 37.0 37.0 35.0 37.0 8 36.64823815650232 37.0 37.0 37.0 35.0 37.0 9 38.717604638018955 39.0 39.0 39.0 39.0 39.0 10 37.55055709594348 39.0 37.0 39.0 34.0 39.0 11 37.648424100273765 39.0 37.0 39.0 35.0 39.0 12 37.23685909804314 39.0 35.0 39.0 35.0 39.0 13 37.198587597725535 39.0 37.0 39.0 35.0 39.0 14 37.86338035271187 40.0 37.0 40.0 34.0 40.0 15 37.92475720505851 40.0 37.0 40.0 35.0 40.0 16 38.049611969316125 40.0 37.0 40.0 35.0 40.0 17 37.86858887937187 40.0 37.0 40.0 34.0 40.0 18 37.720298896733624 40.0 36.0 40.0 33.0 40.0 19 37.66150634765112 40.0 36.0 40.0 33.0 40.0 20 37.54786213687563 40.0 36.0 40.0 33.0 40.0 21 37.523693648707045 40.0 36.0 40.0 33.0 40.0 22 37.56690719129657 40.0 36.0 40.0 33.0 40.0 23 37.53749130686605 39.0 36.0 40.0 34.0 40.0 24 37.58095382501396 39.0 36.0 40.0 34.0 40.0 25 37.60900647196381 39.0 36.0 40.0 34.0 40.0 26 37.54759355142799 39.0 35.0 40.0 34.0 40.0 27 37.53604717859216 39.0 35.0 40.0 34.0 40.0 28 37.401919037770746 39.0 35.0 40.0 34.0 40.0 29 37.33671475525107 39.0 35.0 40.0 34.0 40.0 30 37.192187420115964 39.0 35.0 40.0 33.0 40.0 31 37.14602083830876 39.0 35.0 40.0 33.0 40.0 32 37.10917350619918 39.0 35.0 40.0 33.0 40.0 33 37.00444584203814 39.0 35.0 40.0 33.0 40.0 34 36.45535213408122 39.0 35.0 40.0 31.0 40.0 35 36.36187564388721 38.0 35.0 40.0 31.0 40.0 36 36.505392369371876 38.0 35.0 40.0 31.0 40.0 37 36.5521588036847 38.0 35.0 40.0 32.0 40.0 38 36.700181601581676 39.0 35.0 40.0 32.0 40.0 39 36.696911302369784 39.0 35.0 40.0 32.0 40.0 40 36.60210098952902 39.0 35.0 40.0 32.0 40.0 41 36.48840495261761 38.0 35.0 40.0 32.0 40.0 42 36.39526288107093 38.0 35.0 40.0 31.0 40.0 43 36.3983987124707 38.0 35.0 40.0 31.0 40.0 44 36.308286718992385 38.0 35.0 40.0 31.0 40.0 45 36.215847101693385 38.0 35.0 40.0 31.0 40.0 46 35.97348918059377 38.0 35.0 40.0 31.0 40.0 47 35.85041261308078 38.0 35.0 40.0 30.0 40.0 48 35.76564011230864 38.0 35.0 40.0 30.0 40.0 49 35.68157321737352 38.0 35.0 40.0 30.0 40.0 50 36.09410540735693 38.0 35.0 40.0 31.0 40.0 51 36.22446739890927 38.0 35.0 40.0 32.0 40.0 52 35.934454995654306 37.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 6.0 11 7.0 12 29.0 13 47.0 14 72.0 15 107.0 16 239.0 17 400.0 18 696.0 19 1023.0 20 1436.0 21 2245.0 22 3240.0 23 4607.0 24 6385.0 25 8839.0 26 12063.0 27 15776.0 28 21403.0 29 27878.0 30 37146.0 31 51371.0 32 72727.0 33 118709.0 34 289408.0 35 184613.0 36 244574.0 37 459329.0 38 1079039.0 39 212288.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.49038800266975 0.41709534118055736 0.06912485966672993 0.02339179648296636 8 99.60156907128265 0.2900162551974961 0.077248956648838 0.031165716871018056 9 98.81104541020036 0.5770209916861073 0.19974072924976066 0.41219286886376805 10 53.93276329252842 28.52275902737751 6.400877962756618 11.143599717337453 11 37.59772553298629 26.774747505166857 19.668894023255927 15.958632938590931 12 34.644476209352376 19.13757107709418 23.938422146288374 22.27953056726507 13 26.81764413793876 18.561425526893213 26.254700245333723 28.366230089834303 14 22.82195411145841 20.213593715310633 30.329565199730226 26.634886973500738 15 26.765502843083766 20.62729234352884 29.11788414897633 23.48932066441106 16 33.79662863982306 21.737562252644008 23.765399891165114 20.700409216367817 17 30.853254296141547 22.59017222385249 25.43829853395067 21.118274946055298 18 29.570242273178366 22.722749082362235 25.64119085254694 22.065817791912462 19 28.868068166776506 26.952742267925718 22.43956127074884 21.73962829454894 20 28.623224692212286 27.394595094306055 22.801013551133835 21.181166662347824 21 27.91723366093521 28.157314733820265 23.566709691697525 20.358741913547 22 26.679359400945895 24.758185552974364 27.658838352181004 20.903616693898734 23 28.430837671437708 23.494363207365474 26.41273494223137 21.66206417896545 24 31.626724357093284 22.59370900745246 23.35607847037261 22.42348816508165 25 28.444704664562337 22.702859051819832 22.227424290069482 26.62501199354835 26 23.54576913137295 23.412982166906772 26.79950499036664 26.24174371135364 27 22.726215830643394 21.677717072719773 26.692876217476474 28.903190879160363 28 23.846570825667385 26.784132237887565 22.773419635522192 26.595877300922854 29 28.424709581041718 26.52486148764822 22.188239529194572 22.862189402115487 30 28.26243774735599 22.738191870160122 25.47244075187117 23.526929630612717 31 30.47765488135667 22.30309745204507 25.147792031521497 22.07145563507677 32 33.17226377262053 22.893810348558777 23.075762106830474 20.858163771990217 33 33.253609795419834 22.34522369631005 23.259849942325914 21.141316565944205 34 28.09505333539704 23.40727428842365 28.682194430651375 19.815477945527928 35 23.75072749187415 29.016262901381168 27.420648232903854 19.81236137384083 36 23.678976307752002 32.57038024275642 23.42796972513238 20.322673724359195 37 28.829023476539216 29.150625660520603 21.4654750390622 20.554875823877982 38 27.197165530577074 29.573358844865467 22.098384215159705 21.131091409397758 39 29.4630182000783 27.136269820870666 21.477135919644276 21.923576059406756 40 27.737978262437746 24.62574876510224 21.742814901554855 25.893458070905158 41 23.364622779267584 28.132907425214537 22.635695181079818 25.86677461443806 42 22.51677520973827 26.30554588679071 22.74078317695614 28.436895726514884 43 22.589962117896057 23.74316367744253 23.241640759434983 30.42523344522643 44 23.13375135080621 23.010068977785497 23.47972582573392 30.376453845674373 45 27.406886292757438 23.806020376075654 22.632823733008557 26.154269598158354 46 25.683457167449546 28.01027558197599 22.424363606566793 23.881903644007675 47 22.495449455160237 27.19846118397508 24.068512750980318 26.237576609884368 48 24.06129911314276 24.120689063494723 27.428036959038444 24.389974864324078 49 27.752650661728712 23.041654906569384 25.310098882866626 23.895595548835278 50 24.681181719941367 23.822933905568576 24.393896842177508 27.101987532312542 51 22.64620047890151 23.669066310140206 27.46133875313321 26.223394457825083 52 22.52311340609069 23.366618785853706 26.924027787213088 27.18624002084251 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 25.0 6 50.0 7 35.0 8 20.0 9 34.5 10 49.0 11 847.0 12 1645.0 13 3826.0 14 7205.0 15 8403.0 16 7909.0 17 7415.0 18 7149.5 19 6884.0 20 6991.5 21 7099.0 22 7732.0 23 8365.0 24 9110.0 25 9855.0 26 12750.0 27 15645.0 28 16966.0 29 18287.0 30 22772.0 31 27257.0 32 31279.0 33 35301.0 34 39557.5 35 43814.0 36 50401.0 37 56988.0 38 63542.0 39 77058.0 40 84020.0 41 86924.0 42 89828.0 43 96823.5 44 103819.0 45 110892.5 46 117966.0 47 123120.5 48 128275.0 49 129717.0 50 131159.0 51 144330.0 52 157501.0 53 165467.5 54 173434.0 55 177704.0 56 181974.0 57 194800.5 58 207627.0 59 214132.0 60 220637.0 61 233683.0 62 246729.0 63 267740.0 64 218478.0 65 148205.0 66 121405.0 67 94605.0 68 74152.5 69 53700.0 70 44941.5 71 36183.0 72 30890.0 73 25597.0 74 21998.5 75 18400.0 76 14896.5 77 11393.0 78 9170.0 79 6947.0 80 5313.0 81 3679.0 82 2569.0 83 1459.0 84 926.0 85 393.0 86 287.0 87 181.0 88 113.5 89 26.5 90 7.0 91 6.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2855702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.382940710722803 #Duplication Level Percentage of deduplicated Percentage of total 1 65.85462090691374 6.17910003496698 2 9.229234045402444 1.73194711706791 3 3.3666361444525617 0.9476684201392438 4 1.6255502479243626 0.6100976639430019 5 0.9706002545797867 0.45535423212672993 6 0.7355483376615544 0.41409638652894487 7 0.5843675224429216 0.3838160071447737 8 0.5300116364482577 0.3978454208629737 9 0.4817363413477307 0.406809317615965 >10 12.165348379596635 29.374431539288864 >50 2.772173322331331 17.781969548704605 >100 1.6004522750819525 27.88999303719026 >500 0.054061723576716694 3.4338544914889884 >1k 0.02590457588051008 4.288725037236371 >5k 0.0022525718156965286 1.284525072139372 >10k+ 0.0015017145437976858 4.4197666735549905 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 66502 2.328744385793756 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 36849 1.2903657314383643 No Hit GCGAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 11847 0.4148542109785965 No Hit GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 10270 0.35963136209590496 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 7610 0.26648438807690716 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCT 6812 0.23854029587120784 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 6002 0.21017599175264084 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 5726 0.2005111177566847 No Hit GCGAATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 5301 0.18562861250928844 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 5014 0.17557854425987024 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 4634 0.1622718336857277 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC 3389 0.11867484772570808 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGTTC 3364 0.11779940624056713 No Hit GCGAATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 3216 0.11261679264853265 No Hit GCGAATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 3177 0.11125110393171278 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGCT 3077 0.10774933799114893 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.00504254295441191 0.0 0.0 0.0 0.0 8 0.0053577018890626545 0.0 0.0 0.0 0.0 9 0.006233143374203611 0.0 0.0 0.0 0.0 10 0.01897957139785594 0.0 0.0 0.0 0.0 11 0.0390797078966923 0.0 0.0 0.0 0.0 12 0.055538007817342284 0.0 0.0 0.0 0.0 13 0.06429242266875185 0.0 0.0 0.0 0.0 14 0.0723815019914543 0.0 0.0 0.0 0.0 15 0.08117093450226949 0.0 0.0 0.0 0.0 16 0.09139609104871586 0.0 0.0 0.0 0.0 17 0.09941513505260703 0.0 0.0 0.0 0.0 18 0.10690891416541362 0.0 0.0 0.0 0.0 19 0.11895498900095318 0.0 0.0 0.0 0.0 20 0.13012562235135178 0.0 0.0 0.0 0.0 21 0.13824971933345986 0.0 0.0 0.0 0.0 22 0.1447630039829086 0.0 0.0 0.0 0.0 23 0.15208169479868697 0.0 0.0 0.0 0.0 24 0.1596104915708992 0.0 0.0 0.0 0.0 25 0.16734939429954526 0.0 0.0 0.0 0.0 26 0.17505327936878567 0.0 0.0 0.0 0.0 27 0.18223189954694152 0.0 0.0 0.0 0.0 28 0.1937527094913965 0.0 0.0 0.0 0.0 29 0.20156164753885383 0.0 0.0 0.0 0.0 30 0.20961570920215064 0.0 0.0 0.0 0.0 31 0.21756471788723053 0.0 0.0 0.0 0.0 32 0.22498846168122585 0.0 0.0 0.0 0.0 33 0.23195697590294787 0.0 0.0 0.0 0.0 34 0.24064135543554616 0.0 0.0 0.0 0.0 35 0.25356287175622666 0.0 0.0 0.0 0.0 36 0.2718420899659698 0.0 0.0 0.0 0.0 37 0.2861993303222815 0.0 0.0 0.0 0.0 38 0.2961093279340772 0.0 0.0 0.0 0.0 39 0.30468865448845855 0.0 0.0 0.0 0.0 40 0.3133380163616512 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAG 35 1.02028935E-7 45.999996 37 GCGAATG 294690 0.0 44.32899 1 CGAATGG 293820 0.0 44.310734 2 GAATGGG 291420 0.0 44.189487 3 AATGGGA 83695 0.0 44.11482 4 AATGGGC 31810 0.0 44.083935 4 AATGGGG 157680 0.0 44.059994 4 ATGGGGG 71815 0.0 43.908653 5 CGAATAG 1240 0.0 43.774193 2 ATGGGAG 26875 0.0 43.74921 5 ATGGGGC 27420 0.0 43.57586 5 ATGGGAT 24285 0.0 43.480747 5 TGGGGGG 45560 0.0 43.299164 6 ATGGGAC 13065 0.0 42.989666 5 ATGGGGT 23380 0.0 42.911037 5 ATGGGGA 37265 0.0 42.827583 5 ATGGGCA 16685 0.0 42.801918 5 ATGGGCT 9190 0.0 42.69641 5 AATGGGT 19680 0.0 42.470528 4 CGAATGA 820 0.0 42.35366 2 >>END_MODULE