##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527436_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 586263 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.905412758437766 31.0 30.0 31.0 26.0 33.0 2 31.316243733614435 31.0 31.0 33.0 30.0 34.0 3 32.08855411308576 33.0 31.0 34.0 30.0 34.0 4 36.05498214964956 37.0 35.0 37.0 35.0 37.0 5 35.94090877302508 37.0 35.0 37.0 35.0 37.0 6 34.243433407873255 35.0 35.0 36.0 32.0 37.0 7 35.938415011692705 36.0 35.0 37.0 35.0 37.0 8 36.483295039939414 37.0 37.0 37.0 35.0 37.0 9 38.66150174921494 39.0 39.0 39.0 38.0 39.0 10 36.912058240073144 39.0 37.0 39.0 32.0 39.0 11 37.01083813919691 39.0 37.0 39.0 34.0 39.0 12 36.979041829349626 39.0 37.0 39.0 33.0 39.0 13 36.95971944332151 39.0 37.0 39.0 33.0 39.0 14 37.72655787590211 40.0 37.0 40.0 33.0 40.0 15 37.84282310157728 40.0 37.0 40.0 33.0 40.0 16 37.90972311061759 40.0 37.0 40.0 34.0 40.0 17 37.92670354431373 40.0 38.0 40.0 34.0 40.0 18 37.84291521040898 40.0 37.0 40.0 33.0 40.0 19 37.732057114298534 40.0 37.0 40.0 33.0 40.0 20 37.61262436824428 39.0 37.0 40.0 33.0 40.0 21 37.682115364605984 40.0 37.0 40.0 33.0 40.0 22 37.64028089782231 39.0 37.0 40.0 33.0 40.0 23 37.593869986678335 39.0 37.0 40.0 33.0 40.0 24 37.58052614611531 39.0 37.0 40.0 33.0 40.0 25 37.5320308462243 39.0 37.0 40.0 33.0 40.0 26 37.466043396905484 39.0 36.0 40.0 33.0 40.0 27 37.39985808417042 39.0 36.0 40.0 33.0 40.0 28 37.26160784494331 39.0 36.0 40.0 33.0 40.0 29 37.268567178894116 39.0 36.0 40.0 33.0 40.0 30 37.18354902151424 39.0 36.0 40.0 33.0 40.0 31 37.10828246026101 39.0 36.0 40.0 32.0 40.0 32 37.03733477978314 39.0 36.0 40.0 32.0 40.0 33 36.88202905521924 39.0 35.0 40.0 32.0 40.0 34 36.6406749189357 39.0 35.0 40.0 31.0 40.0 35 36.54812260026643 38.0 35.0 40.0 31.0 40.0 36 36.595106633029886 38.0 35.0 40.0 31.0 40.0 37 36.529054366385054 38.0 35.0 40.0 31.0 40.0 38 36.42566561423798 38.0 35.0 40.0 31.0 40.0 39 36.335695754294576 38.0 35.0 40.0 31.0 40.0 40 36.578736846773545 39.0 35.0 40.0 31.0 40.0 41 36.719446732950914 39.0 35.0 40.0 32.0 40.0 42 36.719700885097645 39.0 35.0 40.0 32.0 40.0 43 36.6685071375816 39.0 35.0 40.0 32.0 40.0 44 36.606236450193855 38.0 35.0 40.0 32.0 40.0 45 36.46828300609112 38.0 35.0 40.0 32.0 40.0 46 36.21882499833692 38.0 35.0 40.0 31.0 40.0 47 36.19727494315691 38.0 35.0 40.0 31.0 40.0 48 36.139208853364444 38.0 35.0 40.0 31.0 40.0 49 35.9798264601382 37.0 35.0 40.0 31.0 40.0 50 35.83138966641251 37.0 34.0 40.0 31.0 40.0 51 35.704972000620884 37.0 34.0 40.0 31.0 40.0 52 35.289057982509554 36.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 2.0 15 5.0 16 17.0 17 22.0 18 57.0 19 141.0 20 220.0 21 352.0 22 531.0 23 868.0 24 1248.0 25 1779.0 26 2418.0 27 3384.0 28 4616.0 29 6434.0 30 8682.0 31 12200.0 32 16484.0 33 24831.0 34 43543.0 35 44350.0 36 71298.0 37 116477.0 38 200417.0 39 25885.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.49050170316053 0.3757699189612853 0.10626630027820277 0.027462077599984987 8 99.42039664792081 0.3851513740420255 0.16238445885208516 0.03206751918507564 9 98.27705313144442 0.9753301845758644 0.20434514884957777 0.5432715351301378 10 53.7313458294315 36.29940828604227 3.9550508901295154 6.014194994396712 11 35.27819425752606 23.469330317621957 23.136203376300397 18.116272048551586 12 28.254213552620584 18.196952562245954 27.0431529876523 26.505680897481167 13 24.064114569740884 17.112797498733503 30.18781673071642 28.635271200809193 14 23.793587519594446 19.954866672466114 30.690492151133537 25.561053656805903 15 25.113814107320437 20.09337106383995 29.571199274045952 25.22161555479367 16 30.596165884594456 20.79322761286317 24.81275468518395 23.79785181735842 17 30.058352650602206 20.24705635525353 23.250315984464308 26.444275009679956 18 28.214640869370918 21.382382991933653 25.118248976994966 25.284727161700467 19 29.270992711462263 22.569392917513127 22.703291867301875 25.456322503722735 20 27.560327020466925 22.850665998024777 25.133088733213594 24.455918248294708 21 29.499217927790088 21.199188759993383 24.704441521979042 24.597151790237486 22 28.195536815388316 19.755468109022743 25.97451996800071 26.074475107588235 23 27.44740841567692 21.79397301211231 25.637469872736297 25.121148699474467 24 27.46293045953778 22.11447763205251 24.636724473487153 25.78586743492255 25 26.473954522117204 24.60448638239152 23.273513764300322 25.64804533119095 26 27.36263417612914 23.959895132389388 24.455406532563032 24.22206415891844 27 25.718320958341224 21.33598743226163 24.597663505969162 28.348028103427986 28 27.998696830603333 22.571439780439835 23.32707334421582 26.102790044741013 29 28.143853526488964 22.133752257945666 23.381656355594675 26.340737859970698 30 28.177115049047952 20.116227699854843 25.067759691469526 26.63889755962768 31 29.992511893126462 22.501164153289565 23.362552301612073 24.143771651971896 32 31.44441999580393 22.83309709123721 22.091620996037616 23.630861916921244 33 29.815287678055753 21.367202091893912 23.402636700593423 25.414873529456916 34 27.60945173070789 23.87853233105279 24.999189783424843 23.51282615481448 35 28.088929371288994 24.58248260592942 25.314406674137718 22.01418134864387 36 27.03257752919765 25.873370825039277 22.031579683520878 25.0624719622422 37 29.01547598944501 24.962516822654678 22.077975243192903 23.944031944707408 38 27.616786322861923 25.315259533690508 22.676341505433566 24.391612638013996 39 28.031105493609527 23.830601624185732 22.87335206212911 25.264940820075633 40 26.658172185520833 23.218419037189793 23.433169072583464 26.69023970470591 41 25.617171815379784 23.898318672677622 23.615510444970944 26.86899906697165 42 25.246860197556387 21.175138120604576 24.74913136254548 28.82887031929356 43 25.88599314642063 23.467112882784686 25.539902739896597 25.10699123089808 44 26.918294349123173 22.031920827341995 23.75742627455596 27.292358548978875 45 26.775355088074804 22.912071885825984 23.806892128618042 26.505680897481167 46 26.624228375319607 24.27528259501282 24.71433469279146 24.38615433687611 47 25.211210668249574 23.15940115613641 25.523698408393503 26.105689767220515 48 27.472141342707967 22.05136602514571 25.136159027603654 25.34033360454267 49 27.579089930628403 21.82245852117565 25.63849330419965 24.959958243996294 50 25.783820571995847 24.30786182992957 24.76925884799143 25.139058750083155 51 23.31888589250899 22.699880429090697 26.195240020263945 27.785993658136366 52 24.846527923474618 22.85373629241484 25.90714406332994 26.392591720780604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 0.0 11 133.5 12 267.0 13 683.5 14 1154.5 15 1209.0 16 1002.5 17 796.0 18 903.5 19 1011.0 20 985.0 21 959.0 22 1104.5 23 1250.0 24 1341.5 25 1433.0 26 1614.5 27 1796.0 28 2135.5 29 2475.0 30 2877.5 31 3280.0 32 4568.0 33 5856.0 34 6630.5 35 7405.0 36 7136.0 37 6867.0 38 8606.0 39 12962.0 40 15579.0 41 17820.5 42 20062.0 43 19669.5 44 19277.0 45 20564.0 46 21851.0 47 24279.5 48 26708.0 49 27592.5 50 28477.0 51 30734.0 52 32991.0 53 33672.5 54 34354.0 55 36443.0 56 38532.0 57 40563.5 58 42595.0 59 48246.5 60 53898.0 61 50164.0 62 46430.0 63 46983.0 64 42298.0 65 37060.0 66 31626.5 67 26193.0 68 21592.5 69 16992.0 70 14008.5 71 11025.0 72 10463.0 73 9901.0 74 7734.5 75 5568.0 76 4153.0 77 2738.0 78 2077.0 79 1416.0 80 1100.5 81 785.0 82 489.5 83 194.0 84 109.0 85 24.0 86 18.0 87 12.0 88 9.5 89 6.0 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 586263.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.916817196377735 #Duplication Level Percentage of deduplicated Percentage of total 1 67.26031065881092 5.997478947161939 2 10.400566225418931 1.8547989554176199 3 3.906190221133981 1.044923524083901 4 1.757976891881552 0.6270223432145642 5 0.9430713903129544 0.4204597595277205 6 0.6006580457571352 0.32135747949299204 7 0.42275614048511745 0.26387474563463836 8 0.35006503940622846 0.24971727705824862 9 0.27928686203994185 0.22413149047441167 >10 7.8276838319687805 20.20117251131318 >50 4.005662254189303 24.922432423673335 >100 2.130997015839008 35.45968277036074 >500 0.09564618563011708 5.571049170764657 >1k 0.019129237126023414 2.841898601822049 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3368 0.5744861947624189 No Hit ACCTGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2827 0.482206791150047 No Hit ACCTGAGGGAGTCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCT 1884 0.32135747949299204 No Hit ACCTGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1678 0.28621966591785597 No Hit ACCTGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1278 0.21799090169429078 No Hit ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1250 0.21321488819864123 No Hit ACCTGAGGGGATCTTGACTCCCTGACCTTGGACTGGTCCTCGTCCGTGGTCG 1182 0.20161599828063514 No Hit ACCTGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1114 0.19001710836262906 No Hit ACCTGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1054 0.17978279372909428 No Hit ACCTGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1026 0.17500678023344474 No Hit ACCTGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 996 0.16988962291667734 No Hit ACCTGAGGGACTGAGATTCTGTTAGGGGGCGTTTACATTGAGAAGAATGACA 966 0.16477246559990993 No Hit ACCTGAGGGGGTTCCGCGCCGTCATGTCTGTCCTGACGCCACTGCTGCTGAG 913 0.15573215434028753 No Hit ACCTGAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 893 0.15232071612910927 No Hit ACCTGAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 878 0.1497621374707256 No Hit ACCTGAGGGGACTGTTTGCTGCTTTAGGTGTCTCTTTTCCTCCCTCTCTATC 875 0.14925042173904887 No Hit ACCTGAGGGGGGGTTTTCTCAGAGTCCATTGCCGGCAATGGGCAAGCCTGGC 874 0.14907984982848996 No Hit ACCTGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 781 0.13321666214651104 No Hit ACCTGAGGGAGGCTGTGGCTTCTTCGTTTGATCCTATAATCATACAGAGTAT 771 0.1315109430409219 No Hit ACCTGAGGGAGCCAGTGAATCTCTCTTCATCTCTAACCATGCCTACTAACCA 767 0.13082865539868627 No Hit ACCTGAGGCACTGTAGCGTTCTGGCTGCTTAACAGCTGGCTCTGGTTTCGAC 758 0.12929350820365604 No Hit ACCTGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 739 0.1260526419030367 No Hit ACCTGAGGGGTCTGTTTGCTGCTTTAGGTGTCTCTTTTCCTCCCTCTCTATC 735 0.12537035426080104 No Hit ACCTGAGGGGTGGAGTGGATTCTGAAGAGCCCCTTTAGACTAGAGTGTTGAG 721 0.12298234751297626 No Hit ACCTGAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 717 0.12230005987074061 No Hit ACCTGAGGGATGGTGGCATATGCCTTTTTCTCCAGGACTCCGGAGGCAGAGT 705 0.12025319694403365 No Hit ACCTGAGGGACCACTGTCAGTTGCAGGTTTCATTTCATTCTCATGGCTATCT 702 0.1197414812123569 No Hit ACCTGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 677 0.11547718344838409 No Hit ACCTGAGGGGGTTAGTTTTAGTGAAGCTTTTGCGTATTTCCTTCTATGGTTT 657 0.11206574523720583 No Hit ACCTGAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 645 0.11001888231049886 No Hit ACCTGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 642 0.10950716657882215 No Hit ACCTGAGGGGTCGTTCCGCGCCGTCATGTCTGTCCTGACGCCACTGCTGCTG 640 0.1091660227577043 No Hit ACCTGAGGGGGTGCCGGGATCTTCGGAGCCGCAACCGACCACACTTCCTTCT 640 0.1091660227577043 No Hit ACCTGAGGGATCTGTCTGGGAGTCAGTGCCTATATCCTCACCGCCCCAGCCT 627 0.10694858792043845 No Hit ACCTGAGGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA 622 0.10609572836764386 No Hit ACCTGAGGGGCCTCCAGCATTCCCAGGCCTGCGCACTCCTGCTCCTGCCTGT 603 0.10285486206702453 No Hit ACCTGAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 588 0.10029628340864083 No Hit ACCTGAGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 587 0.10012571149808192 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.00801687979626891 0.0 0.0 0.0 0.0 7 0.00801687979626891 0.0 0.0 0.0 0.0 8 0.008187451706827824 0.0 0.0 0.0 0.0 9 0.008699167438504561 0.0 0.0 0.0 0.0 10 0.01995691353539282 0.0 0.0 0.0 0.0 11 0.03377323829066477 0.0 0.0 0.0 0.0 12 0.04264297763972825 0.0 0.0 0.0 0.0 13 0.0486129945092902 0.0 0.0 0.0 0.0 14 0.059700168695619546 0.0 0.0 0.0 0.0 15 0.07061677097138998 0.0 0.0 0.0 0.0 16 0.07795136312542324 0.0 0.0 0.0 0.0 17 0.08426252381610301 0.0 0.0 0.0 0.0 18 0.08852682158007584 0.0 0.0 0.0 0.0 19 0.0946674103601967 0.0 0.0 0.0 0.0 20 0.10063742722975866 0.0 0.0 0.0 0.0 21 0.10575458454652605 0.0 0.0 0.0 0.0 22 0.10933659466826322 0.0 0.0 0.0 0.0 23 0.11615947109061973 0.0 0.0 0.0 0.0 24 0.12417635088688865 0.0 0.0 0.0 0.0 25 0.13031693966700952 0.0 0.0 0.0 0.0 26 0.1378221037316017 0.0 0.0 0.0 0.0 27 0.1434509767800458 0.0 0.0 0.0 0.0 28 0.15402643523469842 0.0 0.0 0.0 0.0 29 0.16084931165705493 0.0 0.0 0.0 0.0 30 0.16886619145332385 0.0 0.0 0.0 0.0 31 0.17671249933903385 0.0 0.0 0.0 0.0 32 0.18575281059865623 0.0 0.0 0.0 0.0 33 0.19206397128933603 0.0 0.0 0.0 0.0 34 0.20008085108560492 0.0 0.0 0.0 0.0 35 0.21116802527193426 0.0 0.0 0.0 0.0 36 0.22174348372658687 0.0 0.0 0.0 0.0 37 0.22941921970173795 0.0 0.0 0.0 0.0 38 0.23863010287191927 0.0 0.0 0.0 0.0 39 0.24630583884707033 0.0 0.0 0.0 0.0 40 0.25688129730172293 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTT 70 0.0 46.000004 33 CGACGGG 35 1.0184158E-7 46.000004 18 GTTAGTA 35 1.0184158E-7 46.000004 31 GATCATA 35 1.0184158E-7 46.000004 18 CTTATCG 35 1.0184158E-7 46.000004 13 GCGCTAA 35 1.0184158E-7 46.000004 30 TCGACGG 35 1.0184158E-7 46.000004 17 TATCGAC 35 1.0184158E-7 46.000004 15 CGCTTTA 35 1.0184158E-7 46.000004 25 GTTTGCG 25 3.4150922E-5 46.0 44 AACCGTT 30 1.8598312E-6 46.0 24 AACCGTA 55 1.8189894E-12 46.0 38 CGGCGTA 20 6.308912E-4 46.0 40 AACCGGC 20 6.308912E-4 46.0 30 TGATACC 30 1.8598312E-6 46.0 20 TCGTTAC 20 6.308912E-4 46.0 40 ACACGAA 20 6.308912E-4 46.0 31 ATTAGTA 25 3.4150922E-5 46.0 33 TCACCGT 20 6.308912E-4 46.0 37 GTCGATG 20 6.308912E-4 46.0 22 >>END_MODULE