##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527419_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2211095 Sequences flagged as poor quality 0 Sequence length 52 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21741942340786 33.0 31.0 34.0 31.0 34.0 2 32.41664288508635 34.0 31.0 34.0 31.0 34.0 3 32.903381356296315 34.0 33.0 34.0 31.0 34.0 4 36.48580047442557 37.0 37.0 37.0 35.0 37.0 5 35.462991866021135 37.0 35.0 37.0 33.0 37.0 6 36.19805661900551 37.0 36.0 37.0 35.0 37.0 7 36.54552201511016 37.0 37.0 37.0 35.0 37.0 8 36.658379671610675 37.0 37.0 37.0 35.0 37.0 9 38.70622836196545 39.0 39.0 39.0 39.0 39.0 10 38.00946996849977 39.0 39.0 39.0 35.0 39.0 11 37.86644445399225 39.0 37.0 39.0 35.0 39.0 12 37.059377367322526 39.0 35.0 39.0 35.0 39.0 13 36.98787659508072 39.0 35.0 39.0 34.0 39.0 14 37.49676472517011 40.0 35.0 40.0 33.0 40.0 15 37.63577548680631 40.0 35.0 40.0 34.0 40.0 16 37.74919169009021 40.0 35.0 40.0 34.0 40.0 17 37.56301380085433 40.0 35.0 40.0 33.0 40.0 18 37.46585967586196 40.0 35.0 40.0 33.0 40.0 19 37.280457872682994 40.0 35.0 40.0 33.0 40.0 20 37.18859479126858 39.0 35.0 40.0 32.0 40.0 21 37.18131061758993 39.0 35.0 40.0 32.0 40.0 22 37.24488500041834 39.0 35.0 40.0 33.0 40.0 23 37.21184028727848 39.0 35.0 40.0 33.0 40.0 24 37.2521234953722 39.0 35.0 40.0 34.0 40.0 25 37.30043259109174 39.0 35.0 40.0 34.0 40.0 26 37.23484201266793 39.0 35.0 40.0 34.0 40.0 27 37.19013068185673 39.0 35.0 40.0 34.0 40.0 28 37.010457262125776 39.0 35.0 40.0 33.0 40.0 29 36.912529764664114 39.0 35.0 40.0 33.0 40.0 30 36.71744497635787 39.0 35.0 40.0 32.0 40.0 31 36.675610500679525 39.0 35.0 40.0 32.0 40.0 32 36.569937971909845 38.0 35.0 40.0 32.0 40.0 33 36.47875600098594 38.0 35.0 40.0 32.0 40.0 34 35.79070370110737 38.0 34.0 40.0 30.0 40.0 35 35.66268342156262 38.0 34.0 40.0 29.0 40.0 36 35.81069198745418 38.0 34.0 40.0 30.0 40.0 37 35.796495853864265 38.0 35.0 40.0 30.0 40.0 38 35.96367094132093 38.0 35.0 40.0 31.0 40.0 39 35.92557488484213 38.0 35.0 40.0 31.0 40.0 40 35.70457669163921 37.0 35.0 40.0 30.0 40.0 41 35.58835147291274 37.0 35.0 40.0 30.0 40.0 42 35.539009404842396 37.0 35.0 40.0 30.0 40.0 43 35.50566303121304 36.0 35.0 40.0 30.0 40.0 44 35.419100490933225 36.0 35.0 40.0 30.0 40.0 45 35.254823967310315 36.0 34.0 40.0 30.0 40.0 46 35.02930131902971 35.0 34.0 40.0 29.0 40.0 47 34.8020645879078 35.0 33.0 40.0 28.0 40.0 48 34.66039903305828 35.0 33.0 39.0 28.0 40.0 49 34.62175844999876 35.0 33.0 39.0 28.0 40.0 50 34.97909542556968 35.0 34.0 39.0 30.0 40.0 51 35.074078228208194 35.0 34.0 39.0 30.0 40.0 52 34.809526953839615 35.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 6.0 12 11.0 13 33.0 14 54.0 15 80.0 16 166.0 17 332.0 18 558.0 19 938.0 20 1404.0 21 2110.0 22 3222.0 23 4718.0 24 6789.0 25 9077.0 26 12001.0 27 15915.0 28 20143.0 29 25839.0 30 34496.0 31 46712.0 32 69493.0 33 106909.0 34 279432.0 35 213471.0 36 198992.0 37 331484.0 38 644033.0 39 182676.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.46650867556572 0.35715335614254473 0.09886504198146166 0.07747292631026709 8 99.45823223335044 0.2659768123938591 0.17412187174228155 0.1016690825134153 9 98.59888426322705 0.7394526241522865 0.2145091006944523 0.4471540119262175 10 70.83454125670765 18.84012220189544 3.5595033230141624 6.765833218382747 11 46.0072498015689 21.953014230505698 13.759245984455665 18.280489983469728 12 40.65397461438789 14.581598710141355 21.823304742672747 22.941121932798005 13 29.434601407899706 12.800354575447912 23.71987635085783 34.04516766579455 14 23.721323597584 14.966475886382085 32.36930118335033 28.94289933268358 15 28.990884606948143 14.059414000755282 27.7253577978332 29.224343594463377 16 36.981269461511154 15.273246965869852 23.349245509577834 24.39623806304116 17 36.17112788007752 18.58395953136342 23.039851295398886 22.205061293160178 18 36.07664980473476 17.746229809212178 23.71657481926376 22.460545566789307 19 35.06633591048779 22.808517951512712 19.286462137538187 22.83868400046131 20 36.87602748864251 24.649777598882004 17.86033616827861 20.613858744196882 21 35.0191647125067 23.960435892623337 21.78232956973807 19.23806982513189 22 31.083241561307855 20.28275582912539 26.090692620624623 22.54330998894213 23 33.30435824783648 19.594544784371546 24.790341437161224 22.31075553063075 24 37.1248182461631 19.445116559894533 20.3536709187077 23.07639427523467 25 32.95163708479283 16.48269296434572 19.501830540976304 31.063839409885148 26 26.691390464905396 16.62009095041145 25.14763047268435 31.540888111998804 27 23.66877045083997 16.361983542091135 25.154323988792882 34.814922018276015 28 26.056998907780986 24.350242753025082 19.497172215576445 30.095586123617483 29 32.87592799043008 23.307727619120843 17.993573320006604 25.822771070442474 30 32.29815996146706 19.350005314109072 23.87970666117919 24.472128063244682 31 36.901489985731054 17.384463354129966 22.188417955809225 23.525628704329755 32 41.610604700386006 16.62284976448321 20.33802256348099 21.428522971649794 33 42.66732094279079 16.92681680343902 19.624349021638597 20.78151323213159 34 32.78149514154751 19.349100784905215 27.592482457786755 20.276921615760518 35 28.132260260187824 27.751272559523677 25.469281057575543 18.647186122712956 36 28.63639961195697 31.135478122830545 19.735244302031347 20.49287796318114 37 32.59118219705621 28.41415678656955 18.030704243824893 20.96395677254935 38 34.340813036074884 27.426410895958792 17.02161146400313 21.211164603963194 39 34.369712744138084 23.198912755896963 17.564148080475963 24.867226419488986 40 31.80369907217917 20.961243184937782 18.268912009660372 28.96614573322268 41 25.973646541645657 23.864420117634022 18.93536912706148 31.226564213658843 42 23.761575147155593 21.96757715068778 21.506448162561988 32.764399539594635 43 24.168206250749062 18.07859906516907 22.060834111605335 35.69236057247653 44 26.201633127477564 16.240550496473467 21.100585908791796 36.457230467257176 45 30.618358776986064 19.151099342181137 20.002623134691184 30.22791874614162 46 28.675972764625673 23.33092879319975 21.010766158848895 26.982332283325682 47 26.565389546808255 22.44815351669648 22.296283063369053 28.690173873126213 48 26.860356520185704 20.64651224845608 26.711380560310616 25.781750671047604 49 31.83549327369471 17.573690863576644 25.097202969569377 25.493612893159273 50 27.371279840983764 19.1117523218134 23.705222977755366 29.81174485944747 51 24.538203921586362 20.562164900196507 25.976043544035875 28.923587634181253 52 24.91055336835369 18.525255586033165 26.361689570099884 30.202501475513266 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 8.5 8 15.0 9 29.0 10 43.0 11 166.0 12 289.0 13 496.5 14 1077.0 15 1450.0 16 1518.0 17 1586.0 18 1661.5 19 1737.0 20 1768.5 21 1800.0 22 1774.0 23 1748.0 24 2069.0 25 2390.0 26 3056.5 27 3723.0 28 4582.5 29 5442.0 30 6708.5 31 7975.0 32 8930.0 33 9885.0 34 10659.5 35 11434.0 36 15483.0 37 19532.0 38 19322.0 39 21587.5 40 24063.0 41 25498.5 42 26934.0 43 29498.5 44 32063.0 45 36944.5 46 41826.0 47 49432.0 48 57038.0 49 58378.5 50 59719.0 51 65082.5 52 70446.0 53 83988.0 54 97530.0 55 110452.5 56 123375.0 57 158162.0 58 192949.0 59 206091.0 60 219233.0 61 240641.0 62 262049.0 63 291436.5 64 255688.5 65 190553.0 66 158211.5 67 125870.0 68 102399.5 69 78929.0 70 72034.5 71 65140.0 72 56872.0 73 48604.0 74 46437.0 75 44270.0 76 34392.5 77 24515.0 78 17175.0 79 9835.0 80 6695.5 81 3556.0 82 2691.0 83 1826.0 84 1269.0 85 712.0 86 499.0 87 286.0 88 172.0 89 31.5 90 5.0 91 7.5 92 10.0 93 10.0 94 10.0 95 5.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2211095.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.44694144178908 #Duplication Level Percentage of deduplicated Percentage of total 1 66.96113429502016 5.656167802658099 2 10.17753305411166 1.7193805145990795 3 3.760537809907491 0.9529512800976702 4 1.746489808682693 0.590099885704965 5 1.0235590838998074 0.4322971821956475 6 0.7029416966315278 0.3562624409063029 7 0.5504922374875528 0.3254982985951765 8 0.45161224634625574 0.3051793759425318 9 0.4191870484562919 0.318676360632003 >10 9.70020288248902 21.849695632239005 >50 2.7408846357925842 15.833881070136316 >100 1.6074320478627286 26.077190087923096 >500 0.0905899309094057 5.284671108015771 >1k 0.05931483571449183 9.638111601646738 >5k 0.004853032013003878 2.6982686033825267 >10k+ 0.003235354675335918 7.961668755325042 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 59829 2.705853886875055 No Hit CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 44019 1.9908235512268808 No Hit CTCCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 25601 1.157842607395883 No Hit CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 18875 0.8536494361391076 No Hit CTCCATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 16063 0.7264726300769528 No Hit CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 10410 0.4708074506070522 No Hit CTCCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 9509 0.43005840997333894 No Hit CTCCATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 8327 0.3766007340254489 No Hit CTCCATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6970 0.3152284275438188 No Hit CTCCATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6392 0.28908753355238015 No Hit CTCCATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5947 0.26896175876658396 No Hit CTCCATGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 5648 0.2554390471689367 No Hit CTCCATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 5525 0.2498761925652222 No Hit CTCCATGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTGCT 5467 0.24725305787403978 No Hit CTCCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGAAG 5455 0.24671034035172618 No Hit CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 4738 0.2142829683934883 No Hit CTCCATGGGGGGGGCTGGTGAGATGGCTCAGTAGGTAAGAGCACCCGACTGC 4650 0.21030303989652185 No Hit CTCCATGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4109 0.18583552493221686 No Hit CTCCATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 4019 0.1817651435148648 No Hit CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 3993 0.180589255549852 No Hit CTCCATGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACCT 3889 0.17588570368980075 No Hit CTCCATGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 3758 0.1699610374045439 No Hit CTCCATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 3702 0.16742835563374708 No Hit CTCCATGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 3603 0.16295093607465982 No Hit CTCCATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3288 0.14870460111392772 No Hit CTCCATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 3147 0.14232767022674286 No Hit CTCCATGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 3037 0.1373527596055348 No Hit CTCCATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 3016 0.136403003941486 No Hit CTCCATGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2994 0.1354080218172444 No Hit CTCCATGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 2952 0.13350851048914678 No Hit CTCCATGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 2899 0.13111150809892835 No Hit CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 2850 0.12889541154948114 No Hit CTCCATGGGGGGCTGGTGAGTTGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2833 0.12812656172620354 No Hit CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 2803 0.12676976792041952 No Hit CTCCATGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2786 0.12600091809714192 No Hit CTCCATGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGAACG 2702 0.12220189544094669 No Hit CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTT 2598 0.11749834358089543 No Hit CTCCATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2515 0.11374454738489301 No Hit CTCCATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2504 0.11324705632277221 No Hit CTCCATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 2502 0.1131566034023866 No Hit CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 2491 0.11265911234026581 No Hit CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCT 2397 0.10840782508214256 No Hit CTCCATGGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGCT 2396 0.10836259862194975 No Hit CTCCATGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 2378 0.10754852233847935 No Hit CTCCATGGGGGGGGCTGGCGAGATAGCTCAGTGGTTAAGAGCACCGACTGCT 2333 0.10551333162980334 No Hit CTCCATGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 2307 0.10433744366479053 No Hit CTCCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGGAG 2264 0.10239270587650011 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 4.974910621208043E-4 0.0 0.0 0.0 0.0 8 7.236233630848064E-4 0.0 0.0 0.0 0.0 9 0.0032110786736888283 0.0 0.0 0.0 0.0 10 0.012889541154948114 0.0 0.0 0.0 0.0 11 0.04328172240450998 0.0 0.0 0.0 0.0 12 0.052779279044998066 0.0 0.0 0.0 0.0 13 0.05987983329526773 0.0 0.0 0.0 0.0 14 0.0784679084345087 0.0 0.0 0.0 0.0 15 0.08674435064979116 0.0 0.0 0.0 0.0 16 0.09660371897182166 0.0 0.0 0.0 0.0 17 0.10542287870941773 0.0 0.0 0.0 0.0 18 0.11175458313640979 0.0 0.0 0.0 0.0 19 0.1249607095127075 0.0 0.0 0.0 0.0 20 0.13717185376476362 0.0 0.0 0.0 0.0 21 0.1458101076615885 0.0 0.0 0.0 0.0 22 0.15218703854877336 0.0 0.0 0.0 0.0 23 0.16078006598540542 0.0 0.0 0.0 0.0 24 0.1719962281132199 0.0 0.0 0.0 0.0 25 0.17868974422175438 0.0 0.0 0.0 0.0 26 0.18787071564089286 0.0 0.0 0.0 0.0 27 0.19877029254735776 0.0 0.0 0.0 0.0 28 0.25566517946990064 0.0 0.0 0.0 0.0 29 0.26697179451810077 0.0 0.0 0.0 0.0 30 0.28949457169411535 0.0 0.0 0.0 0.0 31 0.30021324275980904 0.0 0.0 0.0 0.0 32 0.30989170524106835 0.0 0.0 0.0 0.0 33 0.3182586003767364 0.0 0.0 0.0 0.0 34 0.3285250068405021 0.0 0.0 0.0 0.0 35 0.3715805969440481 0.0 0.0 0.0 0.0 36 0.39102797482695223 0.0 0.0 0.0 0.0 37 0.4066311035934684 0.0 0.0 0.0 0.0 38 0.4180281715620541 0.0 0.0 0.0 0.0 39 0.42662119899868617 0.0 0.0 0.0 0.0 40 0.43521422643531826 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGAT 25 3.418188E-5 46.0 46 CGTATCG 30 1.8621886E-6 46.0 33 CTCGTAC 20 6.312725E-4 46.0 29 CGCATTA 20 6.312725E-4 46.0 18 CGTACTT 20 6.312725E-4 46.0 41 CGTAATA 30 1.8621886E-6 46.0 23 CGTAACG 30 1.8621886E-6 46.0 45 CGGTAAT 25 3.418188E-5 46.0 40 GCCGTAT 30 1.8621886E-6 46.0 31 GCGTAAT 25 3.418188E-5 46.0 22 ATGGGGT 15175 0.0 44.075123 5 ATGGGGC 30800 0.0 43.94643 5 CATGGGG 161780 0.0 43.756584 4 TCCATGG 230420 0.0 43.709187 2 ATGGGGG 82070 0.0 43.704765 5 CTCCATG 231310 0.0 43.70408 1 ATGGGAT 9145 0.0 43.66102 5 CCATGGG 228140 0.0 43.64193 3 ATGGGAG 17720 0.0 43.41704 5 CATGGGT 7570 0.0 43.35667 4 >>END_MODULE