##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527416_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1768910 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.194961869173675 33.0 31.0 34.0 31.0 34.0 2 32.554371901340375 34.0 31.0 34.0 31.0 34.0 3 32.74655183135377 34.0 31.0 34.0 31.0 34.0 4 36.29848776930426 37.0 37.0 37.0 35.0 37.0 5 36.46219253664686 37.0 37.0 37.0 35.0 37.0 6 36.473280155576035 37.0 37.0 37.0 35.0 37.0 7 36.5884567332425 37.0 37.0 37.0 35.0 37.0 8 36.68566348768451 37.0 37.0 37.0 35.0 37.0 9 38.68672402779112 39.0 39.0 39.0 39.0 39.0 10 37.635726520851826 39.0 37.0 39.0 35.0 39.0 11 37.82998400144722 39.0 37.0 39.0 35.0 39.0 12 37.68594275570832 39.0 37.0 39.0 35.0 39.0 13 37.69450848262489 39.0 37.0 39.0 35.0 39.0 14 38.42495717701862 40.0 38.0 40.0 35.0 40.0 15 38.49020131041149 40.0 38.0 40.0 35.0 40.0 16 38.58841546489081 40.0 38.0 40.0 35.0 40.0 17 38.52963180715808 40.0 38.0 40.0 35.0 40.0 18 38.41143755193877 40.0 38.0 40.0 35.0 40.0 19 38.33067143042891 40.0 38.0 40.0 34.0 40.0 20 38.28636561498324 40.0 38.0 40.0 34.0 40.0 21 38.255605429332185 40.0 38.0 40.0 34.0 40.0 22 38.26387945118746 40.0 38.0 40.0 34.0 40.0 23 38.15685817820013 40.0 38.0 40.0 34.0 40.0 24 38.12280556953152 40.0 38.0 40.0 34.0 40.0 25 38.12713026666139 40.0 38.0 40.0 35.0 40.0 26 38.05196137734537 40.0 38.0 40.0 35.0 40.0 27 38.01298992034643 40.0 38.0 40.0 35.0 40.0 28 37.930283620986934 40.0 37.0 40.0 34.0 40.0 29 37.84633474851745 40.0 37.0 40.0 34.0 40.0 30 37.73045039035338 40.0 37.0 40.0 34.0 40.0 31 37.6909746680159 40.0 37.0 40.0 34.0 40.0 32 37.60137881520258 40.0 37.0 40.0 34.0 40.0 33 37.42211757522995 40.0 36.0 40.0 33.0 40.0 34 37.145666540411895 39.0 36.0 40.0 33.0 40.0 35 37.00764821274118 39.0 35.0 40.0 32.0 40.0 36 36.91026338253501 39.0 35.0 40.0 32.0 40.0 37 36.81833501987099 39.0 35.0 40.0 32.0 40.0 38 36.96140448072542 39.0 35.0 40.0 32.0 40.0 39 36.91458016518647 39.0 35.0 40.0 32.0 40.0 40 36.766566416606835 39.0 35.0 40.0 32.0 40.0 41 36.64819465094324 39.0 35.0 40.0 32.0 40.0 42 36.52735695993578 39.0 35.0 40.0 31.0 40.0 43 36.49318846069048 39.0 35.0 40.0 31.0 40.0 44 36.3987410326133 39.0 35.0 40.0 31.0 40.0 45 36.30560740795179 39.0 35.0 40.0 31.0 40.0 46 36.167178092723766 38.0 35.0 40.0 31.0 40.0 47 36.0371675212419 38.0 35.0 40.0 31.0 40.0 48 35.88530450955673 38.0 35.0 40.0 30.0 40.0 49 35.71723038481325 38.0 35.0 40.0 30.0 40.0 50 35.995631773238884 38.0 35.0 40.0 31.0 40.0 51 36.09228621015201 38.0 35.0 40.0 31.0 40.0 52 35.75260358073616 37.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 6.0 13 24.0 14 31.0 15 59.0 16 88.0 17 149.0 18 277.0 19 494.0 20 778.0 21 1267.0 22 1812.0 23 2795.0 24 3870.0 25 5254.0 26 7552.0 27 10551.0 28 13696.0 29 16313.0 30 18859.0 31 24278.0 32 35286.0 33 51193.0 34 104769.0 35 111062.0 36 155927.0 37 272505.0 38 690517.0 39 239494.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.51195934219378 0.3637833468067906 0.10509296685529508 0.019164344144133958 8 99.22398539213414 0.6098670932947409 0.09514333685716063 0.07100417771395945 9 97.17645329609759 1.5716458157848618 0.501608335076403 0.7502925530411383 10 48.13320067160002 34.933320519415915 5.734887586140617 11.198591222843445 11 32.473726758286176 26.008276283134812 22.5773498934372 18.94064706514181 12 29.555262845481117 20.17445771689911 25.974583217913853 24.29569621970592 13 25.765584455964408 18.655499714513457 29.195210609923627 26.383705219598507 14 25.46031171738528 19.62688887506996 30.140312395769147 24.772487011775613 15 24.774635227343392 21.739319694048877 28.50275028124664 24.983294797361086 16 30.06376808316986 22.18060839726159 25.32808339598962 22.427540123578925 17 30.462770858890504 22.858370408895873 22.482715344477672 24.19614338773595 18 28.586304560435522 23.08608125908045 24.614084379646222 23.713529800837804 19 28.166045756991593 23.586728550350216 23.71268182100842 24.534543871649774 20 27.876601975227683 24.844226105341708 23.72048323543877 23.55868868399184 21 28.90944140742039 23.431152517652112 24.844508765284836 22.814897309642664 22 27.88559056141918 22.333527426494282 25.87621755770503 23.90466445438151 23 27.86461719363902 22.89228960207133 25.77168991073599 23.471403293553657 24 28.138571210519476 22.976465733135097 24.651452024127853 24.23351103221758 25 27.794404463765822 22.942433475982384 22.78764889112504 26.475513169126753 26 26.412819193740777 23.389149250103173 23.36698871056187 26.831042845594176 27 24.91720890265757 22.097902097902097 24.845695937045978 28.13919306239436 28 25.699442029272262 24.296544199535308 23.324815847047052 26.679197924145377 29 27.966487837142644 24.081213854859772 22.949726102515108 25.00257220548247 30 27.76907813286148 22.94797361086771 23.680967375389365 25.60198088088145 31 29.334166237965754 23.20739890667134 22.925756539337787 24.532678316025123 32 31.579560294192472 22.660734576660204 22.56655228360968 23.19315284553765 33 30.778049759456387 22.604089524057187 23.40073830777145 23.21712240871497 34 27.704914325771234 24.2405775307958 26.008615475066566 22.045892668366395 35 26.837713620252018 26.1684314069116 25.73098687892544 21.26286809391094 36 27.68111435855979 27.454590680136352 22.452357666585637 22.411937294718214 37 27.97847261873131 28.451871491483455 21.945717984521544 21.623937905263695 38 29.25722620144609 26.835508872695613 21.567292852660678 22.339972073197618 39 28.433781255123215 25.18901470397024 21.999479905704643 24.377724135201902 40 26.910470289613375 25.784466140165414 21.79144218756183 25.51362138265938 41 25.4226048809719 25.71470566620122 23.442685043331768 25.42000440949511 42 25.060234833880752 23.854011792572827 24.389313192870183 26.696440180676234 43 25.006020656788642 23.777128288041787 24.400110802697704 26.81674025247186 44 26.021561300461865 23.290953185860218 24.88035004607357 25.807135467604343 45 26.50434448332589 23.7170347841326 23.18484264320966 26.59377808933185 46 25.64387108445314 24.9433832133913 23.26014325205918 26.152602450096385 47 25.254648342764753 24.499154846770043 24.582596061981672 25.66360074848353 48 26.529388154287105 24.59237609601393 24.821726373868653 24.056509375830313 49 26.443798723507694 23.9799085312424 24.24922692505554 25.327065820194356 50 24.738454754622904 24.366248141510873 25.17855628607448 25.71674081779175 51 25.123154937221226 24.661514718103238 24.300671034704987 25.914659309970546 52 24.80284468966765 24.208071637335987 24.965374156966718 26.023709516029648 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 8.0 2 16.0 3 12.5 4 9.0 5 45.5 6 82.0 7 965.5 8 1849.0 9 2918.0 10 3987.0 11 4231.5 12 4476.0 13 3804.5 14 3138.0 15 3143.0 16 3614.5 17 4086.0 18 4297.0 19 4508.0 20 5562.0 21 6616.0 22 7588.0 23 8560.0 24 11058.0 25 13556.0 26 15714.5 27 17873.0 28 20157.0 29 22441.0 30 24235.0 31 26029.0 32 31415.0 33 36801.0 34 39650.0 35 42499.0 36 44638.0 37 46777.0 38 50382.0 39 57580.0 40 61173.0 41 65725.0 42 70277.0 43 73293.0 44 76309.0 45 81218.5 46 86128.0 47 88109.0 48 90090.0 49 93445.0 50 96800.0 51 99576.5 52 102353.0 53 121325.5 54 140298.0 55 146259.0 56 152220.0 57 144334.0 58 136448.0 59 128403.0 60 120358.0 61 112749.5 62 105141.0 63 91183.5 64 60638.0 65 44050.0 66 39854.5 67 35659.0 68 32965.0 69 30271.0 70 26098.0 71 21925.0 72 16941.0 73 11957.0 74 9001.5 75 6046.0 76 4264.0 77 2482.0 78 1701.5 79 921.0 80 553.0 81 185.0 82 131.5 83 78.0 84 62.0 85 46.0 86 35.5 87 25.0 88 17.5 89 8.0 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1768910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.074049345033208 #Duplication Level Percentage of deduplicated Percentage of total 1 67.71104440081145 6.82124402497509 2 9.39909420800554 1.8937387770012724 3 3.5327399537221664 1.0676698985090232 4 1.6369924645313827 0.6596457146054668 5 1.0166544905243275 0.5120913752195836 6 0.6434525714236676 0.38893037734263197 7 0.5617746644149104 0.3961541983073694 8 0.4900181236586322 0.39491734061581163 9 0.42979264359951413 0.3896777069778399 >10 10.10702754735289 27.046916224674245 >50 2.7802737557421215 19.273734564450326 >100 1.5983462271002988 30.912357156162003 >500 0.06506542163417146 4.426660716289752 >1k 0.024894596103509078 3.859762700681261 >5k 0.002828931375398759 1.9564992241883243 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTAACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 8877 0.5018344630309061 No Hit TTAACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 7060 0.39911583969789305 No Hit TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 6566 0.37118903731676567 No Hit TTAACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 6319 0.357225636126202 No Hit TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5504 0.31115206539620444 No Hit TTAACTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 3644 0.2060025665522836 No Hit TTAACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3582 0.20249758325748624 No Hit TTAACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2818 0.15930714394740264 No Hit TTAACTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2592 0.14653091451798 No Hit TTAACTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 2256 0.1275361663397233 No Hit TTAACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2102 0.11883024009135569 No Hit TTAACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2009 0.11357276514915966 No Hit TTAACTGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1887 0.10667586253681645 No Hit TTAACTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1811 0.10237943140125841 No Hit TTAACTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1797 0.10158798356049771 No Hit TTAACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 1788 0.10107919566286583 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0013567677270183334 0.0 0.0 0.0 0.0 8 0.0022612795450305556 0.0 0.0 0.0 0.0 9 0.0032223233516685415 0.0 0.0 0.0 0.0 10 0.016224680735594237 0.0 0.0 0.0 0.0 11 0.038328688288267916 0.0 0.0 0.0 0.0 12 0.06190252754521146 0.0 0.0 0.0 0.0 13 0.07445262902013104 0.0 0.0 0.0 0.0 14 0.08649394259741874 0.0 0.0 0.0 0.0 15 0.10107919566286583 0.0 0.0 0.0 0.0 16 0.11628630060319632 0.0 0.0 0.0 0.0 17 0.12861027412361284 0.0 0.0 0.0 0.0 18 0.142460611336925 0.0 0.0 0.0 0.0 19 0.15648054451611446 0.0 0.0 0.0 0.0 20 0.171913777410948 0.0 0.0 0.0 0.0 21 0.18587717860151168 0.0 0.0 0.0 0.0 22 0.1976923642242963 0.0 0.0 0.0 0.0 23 0.2130690651305041 0.0 0.0 0.0 0.0 24 0.22912414990022104 0.0 0.0 0.0 0.0 25 0.2415611873978891 0.0 0.0 0.0 0.0 26 0.2568813563154711 0.0 0.0 0.0 0.0 27 0.27372788892594874 0.0 0.0 0.0 0.0 28 0.29673640829663467 0.0 0.0 0.0 0.0 29 0.31143472533933325 0.0 0.0 0.0 0.0 30 0.3269244902227926 0.0 0.0 0.0 0.0 31 0.3372133121526816 0.0 0.0 0.0 0.0 32 0.3511767133432453 0.0 0.0 0.0 0.0 33 0.36140900328450853 0.0 0.0 0.0 0.0 34 0.37390257277080235 0.0 0.0 0.0 0.0 35 0.3934626408353167 0.0 0.0 0.0 0.0 36 0.40934812963915634 0.0 0.0 0.0 0.0 37 0.42280274293208814 0.0 0.0 0.0 0.0 38 0.43699227207715485 0.0 0.0 0.0 0.0 39 0.4514079291767247 0.0 0.0 0.0 0.0 40 0.46486254246965647 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 25 3.4179087E-5 46.0 40 TACGCAC 20 6.312382E-4 46.0 10 TACGATT 25 3.4179087E-5 46.0 26 ACGTAAT 30 1.8619758E-6 46.0 24 CACGTAA 30 1.8619758E-6 46.0 23 GCGTAAC 25 3.4179087E-5 46.0 33 TAACTGG 183505 0.0 43.846706 2 AACTGGG 178450 0.0 43.828243 3 TTAACTG 184980 0.0 43.804195 1 ACTGGGG 86795 0.0 43.729015 4 CTGGGAT 19205 0.0 43.497005 5 ACTGGGA 62445 0.0 43.484344 4 CTGGGGG 31870 0.0 43.380295 5 ACTGGGC 20290 0.0 43.34746 4 TGGGATA 3060 0.0 43.218952 6 GATACGG 70 0.0 42.714287 9 TGGGATT 6745 0.0 42.658264 6 TGGGGGG 15600 0.0 42.564743 6 CTGGGAC 10440 0.0 42.519157 5 CTGGGGC 19185 0.0 42.439404 5 >>END_MODULE