SRR1527415_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527415_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2371869
Sequences flagged as poor quality	0
Sequence length	52
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTAACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA	11338	0.47801965454247264	No Hit
TTAACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG	9693	0.40866506539779396	No Hit
TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	8272	0.34875450541324166	No Hit
TTAACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	8116	0.342177413676725	No Hit
TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	7313	0.30832225557145015	No Hit
TTAACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT	4820	0.2032152703205784	No Hit
TTAACTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC	4763	0.20081210218608195	No Hit
TTAACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC	3712	0.1565010546535243	No Hit
TTAACTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC	3532	0.14891210264985122	No Hit
TTAACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT	2828	0.11923086814659663	No Hit
TTAACTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT	2791	0.11767091690139717	No Hit
TTAACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG	2628	0.11079869925362656	No Hit
TTAACTGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC	2558	0.10784744014108705	No Hit
TTAACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA	2524	0.10641397142928215	No Hit
TTAACTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA	2476	0.10439025089496934	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTAAC	35	1.0201802E-7	46.000004	33
TATCACG	25	3.4182638E-5	46.0	45
CGTATGT	20	6.312819E-4	46.0	27
CGTATCG	30	1.8622468E-6	46.0	18
CGTTCGA	25	3.4182638E-5	46.0	45
TAACTGG	245135	0.0	43.97711	2
AACTGGG	238650	0.0	43.952984	3
TTAACTG	247360	0.0	43.901398	1
ACTGGGG	116685	0.0	43.894844	4
TCGTAGT	105	0.0	43.809525	43
CTGGGAT	25880	0.0	43.67156	5
ACTGGGA	82880	0.0	43.63839	4
ACTGGGC	27190	0.0	43.48768	4
CTGGGGG	42740	0.0	43.30931	5
CTGGGGC	25865	0.0	42.612026	5
TGGGATT	8925	0.0	42.54678	6
TGGGATC	7140	0.0	42.488796	6
TGGGGGG	20170	0.0	42.419434	6
CTGGGGA	31375	0.0	42.34199	5
TGGGATG	6550	0.0	42.137405	6