##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527413_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 204040 Sequences flagged as poor quality 0 Sequence length 52 %GC 39 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.665541070378357 31.0 30.0 33.0 28.0 33.0 2 29.217540678298374 31.0 28.0 31.0 25.0 33.0 3 31.059870613605174 31.0 31.0 33.0 28.0 34.0 4 33.75513624779455 35.0 33.0 35.0 30.0 37.0 5 35.172235836110566 35.0 35.0 37.0 33.0 37.0 6 33.8318123897275 35.0 33.0 35.0 32.0 37.0 7 35.2232650460694 35.0 35.0 35.0 35.0 37.0 8 36.20688100372476 37.0 35.0 37.0 35.0 37.0 9 38.402391687904334 39.0 39.0 39.0 37.0 39.0 10 36.19275142128994 39.0 35.0 39.0 31.0 39.0 11 36.42771515389139 38.0 35.0 39.0 31.0 39.0 12 36.88871789845128 39.0 37.0 39.0 34.0 39.0 13 36.94379043324838 39.0 37.0 39.0 33.0 39.0 14 37.83322877867085 40.0 38.0 40.0 34.0 40.0 15 38.058968829641245 40.0 38.0 40.0 34.0 40.0 16 38.02719074691237 40.0 38.0 40.0 34.0 40.0 17 38.14849539306019 40.0 38.0 40.0 35.0 40.0 18 38.05272985689081 40.0 38.0 40.0 34.0 40.0 19 37.90833169966673 40.0 38.0 40.0 34.0 40.0 20 38.08850225445991 40.0 38.0 40.0 34.0 40.0 21 37.964546167418156 40.0 38.0 40.0 34.0 40.0 22 37.96934914722603 40.0 38.0 40.0 34.0 40.0 23 37.70523426779063 39.0 37.0 40.0 34.0 40.0 24 37.324402078023915 39.0 37.0 40.0 33.0 40.0 25 36.61907469123701 38.0 35.0 40.0 33.0 40.0 26 36.235365614585376 37.0 35.0 40.0 32.0 40.0 27 36.05039207998432 37.0 35.0 40.0 32.0 40.0 28 35.93830621446775 37.0 35.0 40.0 31.0 40.0 29 35.744853950205844 37.0 35.0 40.0 31.0 40.0 30 35.31318859047246 37.0 35.0 40.0 30.0 40.0 31 35.162321113507154 37.0 35.0 40.0 30.0 40.0 32 34.78012644579494 37.0 35.0 40.0 25.0 40.0 33 34.368859047245635 36.0 35.0 40.0 24.0 40.0 34 33.955748872770044 37.0 34.0 40.0 20.0 40.0 35 33.563134679474615 37.0 33.0 40.0 17.0 40.0 36 32.94292785728289 37.0 33.0 40.0 14.0 40.0 37 32.0750049009998 37.0 31.0 40.0 10.0 40.0 38 31.4341599686336 37.0 29.0 40.0 9.0 40.0 39 30.624769653009213 36.0 24.0 40.0 8.0 40.0 40 29.876083120956675 35.0 20.0 40.0 8.0 40.0 41 29.4122524995099 35.0 18.0 39.0 8.0 40.0 42 28.791271319349146 35.0 15.0 39.0 8.0 40.0 43 28.562183885512646 35.0 15.0 39.0 8.0 40.0 44 28.180699862772006 35.0 13.0 38.0 8.0 40.0 45 27.84587825916487 35.0 12.0 38.0 8.0 40.0 46 27.55237698490492 35.0 10.0 37.0 8.0 40.0 47 27.330974318761026 35.0 10.0 37.0 8.0 40.0 48 27.008336600666535 35.0 10.0 35.0 8.0 40.0 49 26.66378651244854 35.0 10.0 35.0 8.0 39.0 50 26.21578121936875 34.0 10.0 35.0 8.0 39.0 51 25.969618702215254 34.0 10.0 35.0 8.0 39.0 52 25.411590864536365 33.0 9.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 4.0 15 5.0 16 40.0 17 73.0 18 157.0 19 320.0 20 564.0 21 970.0 22 1687.0 23 2724.0 24 3692.0 25 5274.0 26 7982.0 27 11115.0 28 12585.0 29 10131.0 30 6617.0 31 5128.0 32 5752.0 33 7299.0 34 10876.0 35 16673.0 36 33357.0 37 42328.0 38 17236.0 39 1446.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.13105273475789 0.44059988237600467 0.35189178592432857 0.07645559694177612 8 97.21329151146834 1.784944128602235 0.5891001764359929 0.4126641834934327 9 94.22760243089591 3.0146049794158007 1.5212703391491864 1.2365222505391098 10 45.327386786904526 36.15614585375417 6.530582238776711 11.985885120564594 11 25.687610272495586 48.847774946089004 14.240345030386198 11.22426975102921 12 39.792197608312094 39.389335424426584 12.63722799451088 8.181238972750442 13 23.980101940795922 43.425308762987655 15.408743383650265 17.185845912566165 14 22.301999607920013 49.88090570476377 12.520094099196236 15.297000588119976 15 27.09223681631053 47.727406390903745 12.526465398941383 12.653891393844344 16 22.642128994314838 49.090864536365416 18.13614977455401 10.13085669476573 17 28.16800627327975 46.504116839835326 13.125857674965694 12.20201921191923 18 25.40874338365027 46.72319153107234 15.640070574397177 12.227994510880219 19 22.37257400509704 45.59939227602431 18.80758674769653 13.22044697118212 20 20.32591648696334 46.037541658498334 17.306410507743582 16.330131346794747 21 19.74122721035091 44.743677710252896 23.58214075671437 11.932954322681827 22 21.530092138796313 47.42109390315624 15.610174475593022 15.438639482454422 23 20.833660066653596 51.34679474612821 14.764261909429525 13.055283277788668 24 22.440207802391686 49.83189570672417 18.159674573613017 9.568221917271122 25 24.560870417565184 48.40962556361498 12.91168398353264 14.117820035287199 26 27.03587531856499 45.82336796706528 14.826504606939817 12.314252107429915 27 25.944912762203487 47.25102920995884 15.1837874926485 11.620270535189178 28 27.549500098019998 48.89041364438346 13.97814154087434 9.58194471672221 29 31.177220152911193 46.31248774750049 14.689276612428937 7.82101548715938 30 27.32699470692021 50.96500686139973 12.68868849245246 9.019309939227602 31 28.107233875710648 50.93511076259557 11.351205645951774 9.606449715742011 32 26.10664575573417 50.934620662615174 14.230052930797882 8.728680650852775 33 26.044893158204275 54.34032542638698 10.412174083513037 9.202607331895706 34 26.169868653205253 51.953538521858455 11.34924524603019 10.527347578906097 35 24.67408351303666 55.414134483434616 10.571946677122133 9.339835326406586 36 27.525975298960986 52.58037639678494 11.020878259164869 8.872770045089199 37 25.153891393844347 52.03146441874142 13.28906096843756 9.52558321897667 38 26.32964124681435 52.15987061360517 11.84914722603411 9.661340913546363 39 25.64350127425995 50.61605567535777 11.825622426975103 11.914820623407175 40 25.110272495589097 51.56537933738483 13.022936679082534 10.30141148794354 41 24.646637914134484 51.32425014702999 14.077141736914331 9.951970201921192 42 24.12762203489512 53.429719662811216 11.61634973534601 10.826308566947656 43 26.787884728484613 52.28288570868457 11.38600274455989 9.543226818270927 44 24.97892570084297 53.47088806116448 10.940991962360322 10.609194275632229 45 25.558223877671043 53.35130366594786 10.628308174867673 10.462164281513429 46 22.282395608704174 54.97010390119584 11.168398353264065 11.579102136835914 47 23.493432660262695 52.07655361693786 11.82464222701431 12.605371495785139 48 22.465202901391883 52.74799059008038 12.177514212899432 12.609292295628308 49 21.652617133895312 52.01529111938835 12.46814350127426 13.86394824544207 50 18.569398157224075 53.194471672221134 14.360419525583218 13.875710644971576 51 17.836698686532053 52.44902960203882 14.67408351303666 15.040188198392473 52 19.64075671436973 49.27171142913154 16.268868849245248 14.81866300725348 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 12.0 4 24.0 5 33.0 6 42.0 7 63.0 8 84.0 9 761.5 10 1439.0 11 1309.0 12 1179.0 13 1074.5 14 868.0 15 766.0 16 855.5 17 945.0 18 1131.5 19 1318.0 20 1651.5 21 1985.0 22 2734.0 23 3483.0 24 4107.5 25 4732.0 26 5708.0 27 6684.0 28 8133.5 29 9583.0 30 11917.5 31 14252.0 32 14708.0 33 15164.0 34 14510.5 35 13857.0 36 12934.0 37 12011.0 38 12995.5 39 14269.0 40 14558.0 41 13519.0 42 12480.0 43 12440.5 44 12401.0 45 10868.0 46 9335.0 47 8148.5 48 6962.0 49 6527.0 50 6092.0 51 7876.5 52 9661.0 53 9571.5 54 9482.0 55 8455.5 56 7429.0 57 6087.5 58 4746.0 59 3796.5 60 2847.0 61 2564.5 62 2282.0 63 1804.0 64 1240.0 65 1154.0 66 759.0 67 364.0 68 242.5 69 121.0 70 101.0 71 81.0 72 132.5 73 184.0 74 105.5 75 27.0 76 18.0 77 9.0 78 4.5 79 0.0 80 0.5 81 1.0 82 0.5 83 0.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 204040.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.64399137424034 #Duplication Level Percentage of deduplicated Percentage of total 1 82.17905768157024 37.50980199960792 2 7.661169093329898 6.9937267202509315 3 2.686509470429068 3.678690452852382 4 1.5268650947042908 2.7876886884924525 5 1.060859854829704 2.421093903156244 6 0.8020873598763045 2.1966281121348756 7 0.6184770003865481 1.9760831209566752 8 0.530429927414852 1.9368751225249952 9 0.4005068075419834 1.6452656341893745 >10 2.236610402439548 18.748284650068612 >50 0.190052828243783 5.965496961380121 >100 0.09341579693338488 8.49637326014507 >500 0.009663703131039814 3.077337776906489 >1k 0.004294979169351029 2.566653597333856 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGAGAGGGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAA 1388 0.6802587727896491 No Hit TAGAGAGGGGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAAAA 1383 0.6778082728876691 No Hit TAGAGAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGAGAGGGAAG 1345 0.659184473632621 No Hit TAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1121 0.5494020780239169 No Hit TAGAGAGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 800 0.3920799843168006 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 772 0.3783571848657126 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAAA 762 0.3734561850617526 No Hit TAGAGAGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 703 0.34454028621838856 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGACGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAA 691 0.3386590864536365 No Hit TAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 687 0.33669868653205254 No Hit TAGAGAGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 672 0.3293471868261125 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGAAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 603 0.29553028817878846 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 589 0.28866888845324445 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAAAAAAA 472 0.23132719074691238 No Hit TAGAGAGGGAAGACGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAA 464 0.22740639090374437 No Hit TAGAGAGGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAA 432 0.21172319153107233 No Hit TAGAGAGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 403 0.1975102920995883 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGGCGGTGGATCAGTCAGCATATTTAGCGACTGACACACCGCCTT 378 0.1852577925896883 No Hit TAGAGAGGGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 373 0.1828072926877083 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGT 367 0.1798666928053323 No Hit TAGAGAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 363 0.1779062928837483 No Hit TAGAGAGGGGTGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAA 350 0.17153499313860027 No Hit TAGAGAGGGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAA 345 0.16908449323662025 No Hit TAGAGAGGGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAA 332 0.16271319349147226 No Hit TAGAGAGGGATGGCCAAGTGGAGTTCCCCCAGAGGGGGAGGTGGGGTAAGTG 308 0.15095079396196823 No Hit TAGAGAGGGGTGGCAGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAA 308 0.15095079396196823 No Hit TAGAGAGGGGTTTCGAGGAAGCTGCGGTCCGTCTTGCGGGTCAGGCGCGGCA 304 0.14899039404038422 No Hit TAGAGAGGATATGTGAATGTGTATGCCTTTGTGTGTGTGCTTGTGTATGTAC 287 0.14065869437365222 No Hit TAGAGAGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 283 0.13869829445206822 No Hit TAGAGAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 274 0.13428739462850423 No Hit TAGAGAGGGCGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAA 261 0.1279160948833562 No Hit TAGAGAGGGCAGAGTGCAGTGCTTAGGAGGGGAAATGAGGAAAGGAGATAAA 259 0.1269358949225642 No Hit TAGAGAGGGAAGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAA 256 0.12546559498137622 No Hit TAGAGAGGGACGCAGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAA 253 0.1239952950401882 No Hit TAGAGAGGGGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAA 246 0.12056459517741619 No Hit TAGAGAGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 242 0.11860419525583218 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGGGCCACCTCTCCTCACCCCTCCCTTCACTTAACAAACTCCAGG 241 0.11811409527543619 No Hit TAGAGAGGGAAAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 239 0.11713389531464419 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGGAGTGCAGTGCTTAAGAGGGAAAAAAAAAAAAAAAAAAAAAAA 226 0.11076259556949619 No Hit TAGAGAGGGCAGAGTGCAGTGCTTAAGAGGGAAAAAAAAAAAAAAAAAAAAA 225 0.11027249558910018 No Hit TAGAGAGGGGACAGAGACCGGAAGCTGGGAGATGATGGCTTCTGATGTTTGT 223 0.10929229562830817 No Hit TAGAGAGGGAAGACGCAGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAA 220 0.10782199568712017 No Hit TAGAGAGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 208 0.10194079592236815 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.13575769456969222 0.0 0.0 0.0 0.0 5 0.13575769456969222 0.0 0.0 0.0 0.0 6 0.8635561654577534 0.0 0.0 0.0 0.0 7 0.8689472652421094 0.0 0.0 0.0 0.0 8 0.9145265634189375 0.0 0.0 0.0 0.0 9 0.9561850617525975 0.0 0.0 0.0 0.0 10 1.3614977455400903 0.0 0.0 0.0 0.0 11 2.1696726132130957 0.0 0.0 0.0 0.0 12 2.548029798078808 0.0 0.0 0.0 0.0 13 2.7573024897079006 0.0 0.0 0.0 0.0 14 3.016075279356989 0.0 0.0 0.0 0.0 15 3.2376004704959813 0.0 0.0 0.0 0.0 16 3.4507939619682415 0.0 0.0 0.0 0.0 17 3.634091354636346 0.0 0.0 0.0 0.0 18 3.804156047833758 0.0 0.0 0.0 0.0 19 3.9928445402862183 0.0 0.0 0.0 0.0 20 4.1996667320133305 0.0 0.0 0.0 0.0 21 4.394726524210939 0.0 0.0 0.0 0.0 22 4.587335816506568 0.0 0.0 0.0 0.0 23 4.8461086061556555 0.0 0.0 0.0 0.0 24 5.092138796314448 0.0 0.0 0.0 0.0 25 5.2979807880807686 0.0 0.0 0.0 0.0 26 5.5601842775926285 0.0 0.0 0.0 0.0 27 5.799843168006273 0.0 0.0 0.0 0.0 28 6.10909625563615 0.0 0.0 0.0 0.0 29 6.273769849049206 0.0 0.0 0.0 0.0 30 6.485493040580279 0.0 0.0 0.0 0.0 31 6.622230935110762 0.0 0.0 0.0 0.0 32 6.760929229562831 0.0 0.0 0.0 0.0 33 6.930013722799451 0.0 0.0 0.0 0.0 34 7.101548715938051 0.0 0.0 0.0 0.0 35 7.327974906881003 0.0 0.0 0.0 0.0 36 7.466673201333072 0.0 0.0 0.0 0.0 37 7.604391295824348 0.0 0.0 0.0 0.0 38 7.7573024897079 0.0 0.0 0.0 0.0 39 7.927857282885709 0.0 0.0 0.0 0.0 40 8.111154675553813 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAAAACG 35 1.0140502E-7 46.000004 9 GGAGATA 30 1.8538303E-6 46.0 44 GAGGTGG 40 5.5715645E-9 46.0 38 TGTGAAT 30 1.8538303E-6 46.0 12 TAGCGAC 55 1.8189894E-12 46.0 32 GGGTTTC 40 5.5715645E-9 46.0 8 TCCTTCG 25 3.407213E-5 46.0 16 CTGAGTT 25 3.407213E-5 46.0 24 TCCCAGC 20 6.299194E-4 46.0 11 ACGCCGG 25 3.407213E-5 46.0 27 CCGGACG 20 6.299194E-4 46.0 21 ACGCCGC 20 6.299194E-4 46.0 25 TCCCAAA 20 6.299194E-4 46.0 26 CAGCATA 55 1.8189894E-12 46.0 23 TATACTG 20 6.299194E-4 46.0 36 CCTACCT 30 1.8538303E-6 46.0 41 CAGTCAG 55 1.8189894E-12 46.0 19 CTGAGCC 30 1.8538303E-6 46.0 26 ATCCATC 30 1.8538303E-6 46.0 23 CGGAGAT 20 6.299194E-4 46.0 18 >>END_MODULE