##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527412_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 259179 Sequences flagged as poor quality 0 Sequence length 52 %GC 39 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.777184879947836 31.0 30.0 33.0 25.0 33.0 2 27.831186168632488 30.0 26.0 31.0 16.0 33.0 3 30.140948919472642 31.0 30.0 31.0 27.0 33.0 4 32.64816593937009 35.0 32.0 35.0 28.0 35.0 5 34.49213863777544 35.0 35.0 35.0 32.0 37.0 6 32.594010317193906 35.0 32.0 35.0 28.0 35.0 7 34.934786383156045 35.0 35.0 35.0 33.0 37.0 8 35.87113153457649 35.0 35.0 37.0 35.0 37.0 9 38.24537867651314 39.0 39.0 39.0 37.0 39.0 10 35.13339429506249 37.0 34.0 39.0 27.0 39.0 11 35.3847958360824 37.0 34.0 39.0 30.0 39.0 12 35.94930530637127 37.0 35.0 39.0 31.0 39.0 13 36.0452428630406 38.0 35.0 39.0 31.0 39.0 14 36.922385687112 39.0 36.0 40.0 32.0 40.0 15 37.18341763800308 39.0 36.0 40.0 32.0 40.0 16 37.07510639365072 39.0 36.0 40.0 32.0 40.0 17 37.31001740110117 39.0 36.0 40.0 32.0 40.0 18 37.27306224655547 39.0 36.0 40.0 32.0 40.0 19 37.016158716562686 39.0 36.0 40.0 32.0 40.0 20 37.244946542736876 39.0 36.0 40.0 32.0 40.0 21 37.21181114210642 39.0 36.0 40.0 32.0 40.0 22 37.23162370408097 39.0 36.0 40.0 32.0 40.0 23 37.001909876957626 39.0 36.0 40.0 32.0 40.0 24 36.774426168786825 39.0 36.0 40.0 32.0 40.0 25 36.13545078883706 37.0 35.0 39.0 31.0 40.0 26 35.7211309558259 37.0 35.0 40.0 30.0 40.0 27 35.53504720675672 37.0 35.0 40.0 30.0 40.0 28 35.29973879056559 37.0 35.0 40.0 30.0 40.0 29 35.09002272560663 37.0 35.0 40.0 29.0 40.0 30 34.7026688119022 36.0 34.0 40.0 25.0 40.0 31 34.439838875834845 36.0 34.0 39.0 25.0 40.0 32 34.05942225257448 36.0 33.0 39.0 23.0 40.0 33 33.84282677223077 35.0 33.0 39.0 22.0 40.0 34 33.41541945913828 35.0 33.0 40.0 19.0 40.0 35 33.080897757920205 35.0 33.0 40.0 17.0 40.0 36 32.413281940280655 35.0 31.0 40.0 12.0 40.0 37 31.579240602054952 35.0 30.0 40.0 10.0 40.0 38 30.86455306950023 35.0 26.0 40.0 9.0 40.0 39 30.04939443396263 35.0 23.0 39.0 8.0 40.0 40 29.34750500619263 35.0 20.0 39.0 8.0 40.0 41 28.97327715594242 35.0 18.0 39.0 8.0 40.0 42 28.51830202292624 35.0 15.0 39.0 8.0 40.0 43 28.32952901276724 35.0 15.0 38.0 8.0 40.0 44 27.894262266618824 35.0 13.0 38.0 8.0 40.0 45 27.590283163373577 35.0 13.0 37.0 8.0 40.0 46 27.199425879411525 34.0 10.0 37.0 8.0 40.0 47 26.982838115742403 34.0 10.0 36.0 8.0 40.0 48 26.692093109395437 33.0 10.0 35.0 8.0 40.0 49 26.377437986873936 33.0 10.0 35.0 8.0 39.0 50 25.851835989798555 33.0 10.0 35.0 8.0 39.0 51 25.50139478892966 33.0 10.0 35.0 8.0 39.0 52 24.810698397632525 32.0 9.0 35.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 2.0 12 3.0 13 5.0 14 7.0 15 28.0 16 67.0 17 164.0 18 398.0 19 795.0 20 1342.0 21 2054.0 22 2962.0 23 4048.0 24 5475.0 25 7595.0 26 10717.0 27 14439.0 28 15898.0 29 13387.0 30 9461.0 31 8760.0 32 10173.0 33 13070.0 34 17692.0 35 24815.0 36 39465.0 37 39587.0 38 15944.0 39 824.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.22023003406912 0.41515709220268615 0.28474529186392417 0.07986758186427141 8 97.4230165252586 1.6729750481327577 0.533993880677061 0.3700145459315763 9 94.58443778238205 2.858642096774816 1.414852283556924 1.1420678372861999 10 45.451599087889065 36.577809158921056 6.233915556430112 11.736676196759769 11 25.299117598262207 49.68805343025476 14.087561106416802 10.925267865066228 12 40.06728940230497 39.20495101840813 12.328159303029953 8.39960027625695 13 23.3228772392825 43.11383252501167 15.1817855613302 18.381504674375623 14 21.792274837081706 50.44621670737213 12.455870267267025 15.305638188279143 15 27.67199503046157 47.46102114754668 12.508729488114392 12.35825433387736 16 22.275724499284276 48.61852233398539 18.99845280674746 10.107300359982869 17 28.349133224528224 46.32744165229436 13.028447520825376 12.294977602352041 18 26.04724919843043 46.44743594195517 15.39939578438068 12.10591907523372 19 22.02338924064064 45.26215472704193 19.538234193356715 13.17622183896072 20 19.94297377488145 46.84060051161553 17.076229169801564 16.140196543701457 21 19.44601993217043 44.47080974924666 24.100718036569322 11.98245228201359 22 21.13288499454045 47.301671817546946 15.175612221669194 16.38983096624341 23 20.48584183132121 52.15275928991161 14.424008117941653 12.93739076082553 24 22.224794447080974 50.550005980422796 17.73021734013944 9.494982232356788 25 24.2944065684334 48.102662638562535 12.596313744554921 15.006617048449142 26 27.430463116224697 45.46548910212633 14.605735804212532 12.498311977436444 27 25.588878728600694 47.04007654941179 14.822188526076571 12.548856195910934 28 27.148032826733647 49.483561553983925 13.783909961841045 9.584495657441382 29 31.394904679777298 46.1194772724642 14.595318293534584 7.890299754223914 30 26.956659297242446 51.57748120025156 12.513359492860147 8.952500009645844 31 28.551695932154995 50.639133571778586 11.37977999760783 9.429390498458593 32 25.78835476639697 50.47322506838903 15.125068003194702 8.6133521620193 33 26.39179871826035 53.9194919341459 10.49660659235509 9.192102755238658 34 25.775236419617332 51.709822169234386 11.200753147438643 11.314188263709637 35 24.10573387504389 56.239895979226716 10.420597347778948 9.23377279795045 36 27.42236060791962 52.77047908974106 11.006292948116938 8.800867354222373 37 24.66750778419548 51.93669240177638 13.824808337095213 9.57099147693293 38 26.407617901141684 51.951354083471266 11.862457992352775 9.778570023034273 39 24.919071375381492 50.77224620821903 11.583114372692233 12.725568043707245 40 24.141616411823488 51.53619699126858 13.726806569976734 10.595380026931196 41 23.590645847078658 51.38919434059086 14.948356155398393 10.071803656932083 42 22.82708089775792 54.41451660821286 11.326149109302836 11.432253384726385 43 26.40954706978575 52.463741275334804 11.25206903337076 9.874642621508688 44 24.046701314535515 54.218127240247085 10.963079570489894 10.772091874727504 45 25.253203384533467 53.52594153075674 10.523229119643181 10.697625965066614 46 21.91728496521709 55.295375011092716 11.278305726930036 11.509034296760154 47 23.812886074874893 51.8089814375393 11.92149055286115 12.456641934724649 48 22.845986750469752 52.703344020927624 11.95853059082719 12.492138637775437 49 21.81542486081048 52.04819834940331 12.345907654555347 13.790469135230863 50 18.720266688273355 53.27939377804529 14.13116031777266 13.869179215908698 51 17.942425890986538 52.9209542439781 14.062867747772776 15.073752117262588 52 20.1208431238642 49.18106791059461 15.694172753193739 15.003916212347452 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 10.5 4 21.0 5 34.0 6 47.0 7 71.0 8 95.0 9 957.5 10 1820.0 11 1691.0 12 1562.0 13 1417.0 14 1146.5 15 1021.0 16 1231.5 17 1442.0 18 1755.0 19 2068.0 20 2560.5 21 3053.0 22 4259.5 23 5466.0 24 6389.5 25 7313.0 26 8477.0 27 9641.0 28 11226.0 29 12811.0 30 15160.0 31 17509.0 32 17767.5 33 18026.0 34 16930.5 35 15835.0 36 14885.0 37 13935.0 38 14972.0 39 16729.5 40 17450.0 41 16295.0 42 15140.0 43 14998.5 44 14857.0 45 13298.0 46 11739.0 47 10507.0 48 9275.0 49 8847.5 50 8420.0 51 11039.0 52 13658.0 53 13133.5 54 12609.0 55 11182.5 56 9756.0 57 7977.5 58 6199.0 59 5057.5 60 3916.0 61 3496.5 62 3077.0 63 2405.0 64 1573.5 65 1414.0 66 942.5 67 471.0 68 312.5 69 154.0 70 125.5 71 97.0 72 161.5 73 226.0 74 128.0 75 30.0 76 18.5 77 7.0 78 5.0 79 3.0 80 2.5 81 2.0 82 1.0 83 0.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 259179.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.361809517248645 #Duplication Level Percentage of deduplicated Percentage of total 1 81.17901776537782 34.38890087374279 2 8.155917919942334 6.90998882725824 3 2.917922141176456 3.708253857920381 4 1.5459546592742341 2.6195774719391256 5 1.0123200317123286 2.1441854176946387 6 0.7420376902145763 1.8860435572493426 7 0.6025484496725895 1.7867529854960607 8 0.4631081871346576 1.5694480647421367 9 0.4212775859079407 1.6061472763306681 >10 2.5943903062496516 20.19094414500825 >50 0.23105509834951918 6.8144118819876285 >100 0.12150311206310921 10.697512857830505 >500 0.00896334433252445 2.5824055924743856 >1k 0.003983708592233089 3.0954271903258563 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGAGAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGAGAGGGAAG 2521 0.9726868303373344 No Hit TAGAGAGGGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAA 1734 0.6690356857615779 No Hit TAGAGAGGGGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAAAA 1640 0.6327673152531648 No Hit TAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1442 0.5563722369482095 No Hit TAGAGAGGGGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAAAAAA 891 0.3437778523722987 No Hit TAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 878 0.3387620138977309 No Hit TAGAGAGGGACGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAA 873 0.33683284525366636 No Hit TAGAGAGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 668 0.25773693084702076 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAAAAAAA 591 0.22802773372842705 No Hit TAGAGAGGGAAGACGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAA 587 0.22648439881317547 No Hit TAGAGAGGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAAA 555 0.2141377194911625 No Hit TAGAGAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 544 0.20989354847422054 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGAAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 534 0.20603521118609147 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGT 500 0.19291686440645267 No Hit TAGAGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 482 0.1859718572878204 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 453 0.17478267915224613 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGGTGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAA 445 0.1716960093217429 No Hit TAGAGAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 438 0.16899517322005256 No Hit TAGAGAGGGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAA 437 0.16860933949123966 No Hit TAGAGAGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 430 0.1659085033895493 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGATGGCCAAGTGGAGTTCCCCCAGAGGGGGAGGTGGGGTAAGTG 421 0.16243599983023316 No Hit TAGAGAGGGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAAA 414 0.15973516372854282 No Hit TAGAGAGGATATGTGAATGTGTATGCCTTTGTGTGTGTGCTTGTGTATGTAC 411 0.1585776625421041 No Hit TAGAGAGGGGCGGTGGATCAGTCAGCATATTTAGCGACTGACACACCGCCTT 400 0.15433349152516213 No Hit TAGAGAGGGGTTTCGAGGAAGCTGCGGTCCGTCTTGCGGGTCAGGCGCGGCA 396 0.15279015660991052 No Hit TAGAGAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 383 0.14777431813534275 No Hit TAGAGAGGGCGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAAAA 382 0.14738848440652985 No Hit TAGAGAGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 369 0.14237264593196208 Illumina Single End Adapter 2 (97% over 34bp) TAGAGAGGGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 352 0.13581347254214268 Illumina Single End Adapter 2 (100% over 34bp) TAGAGAGGGCAGAGTGCAGTGCTTAAGAGGGAAAAAAAAAAAAAAAAAAAAA 349 0.13465597135570395 No Hit TAGAGAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGAGAGGGGAG 343 0.13234096898282655 No Hit TAGAGAGGGGGCCACCTCTCCTCACCCCTCCCTTCACTTAACAAACTCCAGG 335 0.12925429915232328 No Hit TAGAGAGGGGACAGAGACCGGAAGCTGGGAGATGATGGCTTCTGATGTTTGT 330 0.12732513050825878 No Hit TAGAGAGGGGTGGCAGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAA 329 0.12693929677944585 No Hit TAGAGAGGGGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAA 326 0.12578179559300715 No Hit TAGAGAGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 319 0.1230809594913168 No Hit TAGAGAGGGCAGAGTGCAGTGCTTAGGAGGGGAAATGAGGAAAGGAGATAAA 290 0.11189178135574256 No Hit TAGAGAGGGAAGACGCAGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAA 289 0.11150594762692964 No Hit TAGAGAGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 282 0.10880511152523932 Illumina Single End Adapter 2 (100% over 25bp) TAGAGAGGGACGCAGAGTGCAGTGCTTAGAGAGGGGAAAAAAAAAAAAAAAA 280 0.1080334440676135 No Hit TAGAGAGGGAAGGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAAAAAAA 275 0.10610427542354897 No Hit TAGAGAGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 274 0.10571844169473606 No Hit TAGAGAGGGCGTACCCAGGCTGGCACTGAGCCATCAGTGTCCTACCTCAGCC 274 0.10571844169473606 No Hit TAGAGAGGGAAGTCAACGCAGAGTGCAGTGCTTAGAGAGGGAAAAAAAAAAA 260 0.10031676949135539 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.10957677898286512 0.0 0.0 0.0 0.0 5 0.10957677898286512 0.0 0.0 0.0 0.0 6 0.774368293727501 0.0 0.0 0.0 0.0 7 0.7809274671173204 0.0 0.0 0.0 0.0 8 0.815266668981669 0.0 0.0 0.0 0.0 9 0.8469050347443273 0.0 0.0 0.0 0.0 10 1.2049587350827036 0.0 0.0 0.0 0.0 11 1.866663579996836 0.0 0.0 0.0 0.0 12 2.1822755701657925 0.0 0.0 0.0 0.0 13 2.3921691186400134 0.0 0.0 0.0 0.0 14 2.6070785055888015 0.0 0.0 0.0 0.0 15 2.821216225079964 0.0 0.0 0.0 0.0 16 2.992140566944081 0.0 0.0 0.0 0.0 17 3.1414582199946754 0.0 0.0 0.0 0.0 18 3.298492547621528 0.0 0.0 0.0 0.0 19 3.4593852125365094 0.0 0.0 0.0 0.0 20 3.6387978964345105 0.0 0.0 0.0 0.0 21 3.8135805755867564 0.0 0.0 0.0 0.0 22 4.019229953044035 0.0 0.0 0.0 0.0 23 4.272336879145301 0.0 0.0 0.0 0.0 24 4.522357135416064 0.0 0.0 0.0 0.0 25 4.759644878636 0.0 0.0 0.0 0.0 26 5.0401459994829825 0.0 0.0 0.0 0.0 27 5.281292079991049 0.0 0.0 0.0 0.0 28 5.612337419312522 0.0 0.0 0.0 0.0 29 5.775159252871568 0.0 0.0 0.0 0.0 30 5.9769502930407175 0.0 0.0 0.0 0.0 31 6.134756288125195 0.0 0.0 0.0 0.0 32 6.276357266599532 0.0 0.0 0.0 0.0 33 6.433005760497571 0.0 0.0 0.0 0.0 34 6.590425921853236 0.0 0.0 0.0 0.0 35 6.840060344395186 0.0 0.0 0.0 0.0 36 6.967385474903445 0.0 0.0 0.0 0.0 37 7.1074431184625295 0.0 0.0 0.0 0.0 38 7.270650785750389 0.0 0.0 0.0 0.0 39 7.4300001157501185 0.0 0.0 0.0 0.0 40 7.631405322190456 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTGC 20 6.302363E-4 46.000004 14 TTTGAAA 20 6.302363E-4 46.000004 32 TTTTGAA 20 6.302363E-4 46.000004 31 ACAAACT 20 6.302363E-4 46.000004 41 TTCACGC 20 6.302363E-4 46.000004 29 TTCATCC 55 1.8189894E-12 46.000004 20 CGGAGTA 20 6.302363E-4 46.000004 44 GGGTTCG 20 6.302363E-4 46.000004 28 AATCCAC 20 6.302363E-4 46.000004 37 GGCATGA 20 6.302363E-4 46.000004 10 CGATAGC 20 6.302363E-4 46.000004 37 ATCCATC 55 1.8189894E-12 46.000004 23 TAAACAA 20 6.302363E-4 46.000004 43 TGACCTA 20 6.302363E-4 46.000004 28 CGTTAAG 20 6.302363E-4 46.000004 22 TCGACCA 20 6.302363E-4 46.000004 30 CCAGTTT 20 6.302363E-4 46.000004 12 GAAATGT 20 6.302363E-4 46.000004 35 AAATCCA 20 6.302363E-4 46.000004 36 CGCCCGA 20 6.302363E-4 46.000004 33 >>END_MODULE