##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527411_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2264665 Sequences flagged as poor quality 0 Sequence length 50 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.549171731801394 31.0 31.0 33.0 30.0 34.0 2 32.159405916548366 34.0 31.0 34.0 30.0 34.0 3 32.61162158641565 34.0 31.0 34.0 31.0 34.0 4 36.20658154738118 37.0 37.0 37.0 35.0 37.0 5 34.941631543738254 35.0 35.0 37.0 33.0 37.0 6 35.85822759657609 37.0 35.0 37.0 35.0 37.0 7 36.19959905769728 37.0 35.0 37.0 35.0 37.0 8 36.5614980582117 37.0 37.0 37.0 35.0 37.0 9 38.46485241746572 39.0 39.0 39.0 37.0 39.0 10 36.819276140179674 39.0 37.0 39.0 32.0 39.0 11 36.892324913397786 38.0 37.0 39.0 34.0 39.0 12 36.81090757352633 38.0 37.0 39.0 33.0 39.0 13 36.934853057737016 39.0 37.0 39.0 33.0 39.0 14 37.78496952087836 40.0 38.0 40.0 33.0 40.0 15 37.76241784104934 40.0 37.0 40.0 33.0 40.0 16 37.92184009555497 40.0 38.0 40.0 34.0 40.0 17 37.81124228086715 40.0 37.0 40.0 34.0 40.0 18 37.66676572473192 39.0 37.0 40.0 33.0 40.0 19 37.566217520030555 39.0 37.0 40.0 33.0 40.0 20 37.39349970083875 39.0 36.0 40.0 33.0 40.0 21 37.26256112935026 39.0 36.0 40.0 33.0 40.0 22 37.00763159231056 38.0 36.0 40.0 33.0 40.0 23 36.752932994504704 38.0 35.0 40.0 32.0 40.0 24 36.62425656774843 38.0 35.0 40.0 32.0 40.0 25 36.412794828374174 38.0 35.0 40.0 31.0 40.0 26 35.817144699105604 38.0 35.0 39.0 30.0 40.0 27 35.69452612196506 38.0 34.0 39.0 30.0 40.0 28 35.495562036769236 37.0 34.0 39.0 30.0 40.0 29 35.09765285373334 37.0 34.0 38.0 30.0 40.0 30 34.804591849125586 36.0 33.0 38.0 29.0 40.0 31 34.68366138038076 36.0 33.0 38.0 29.0 39.0 32 34.584546058688595 36.0 33.0 38.0 29.0 39.0 33 34.0292409694149 35.0 33.0 38.0 27.0 39.0 34 33.60217559771534 35.0 32.0 38.0 27.0 39.0 35 33.425319859670196 35.0 32.0 38.0 26.0 39.0 36 33.02832516067498 34.0 31.0 37.0 26.0 38.0 37 32.79616587883859 34.0 31.0 37.0 26.0 38.0 38 32.353699995363556 34.0 30.0 37.0 24.0 38.0 39 31.469122806242865 33.0 29.0 36.0 23.0 38.0 40 31.179926390879004 33.0 29.0 36.0 23.0 38.0 41 30.892508163459055 33.0 29.0 35.0 22.0 38.0 42 30.483476805620256 32.0 28.0 35.0 22.0 37.0 43 29.979147467727014 31.0 27.0 34.0 21.0 37.0 44 29.540030423925835 31.0 27.0 34.0 21.0 37.0 45 29.05076291636953 31.0 26.0 34.0 20.0 36.0 46 28.851598801588757 31.0 26.0 34.0 20.0 36.0 47 28.3041990758015 30.0 25.0 33.0 19.0 36.0 48 27.716704236608948 29.0 24.0 33.0 18.0 35.0 49 27.186073436910096 29.0 24.0 32.0 17.0 35.0 50 30.957081952518365 32.0 29.0 35.0 23.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 10.0 13 12.0 14 37.0 15 105.0 16 206.0 17 388.0 18 648.0 19 1104.0 20 1834.0 21 3164.0 22 4991.0 23 7628.0 24 11145.0 25 15120.0 26 21368.0 27 28755.0 28 39264.0 29 52704.0 30 71157.0 31 99084.0 32 151475.0 33 226872.0 34 338247.0 35 582747.0 36 533651.0 37 71560.0 38 1386.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.49250772189264 0.35687397473798554 0.08054171367509103 0.07007658969428149 8 99.28916638884779 0.5108923394850894 0.1122903387476735 0.08765093291943842 9 95.60120371004099 2.679424992217392 0.627465872435879 1.0919054253057294 10 50.796298790328805 35.71464212146167 5.4589089335508785 8.030150154658635 11 33.49091366714283 22.49529179812467 22.941847911280476 21.071946623452035 12 26.129162591376648 17.944464192275678 28.382211055498274 27.544162160849396 13 23.708583830279533 17.809477339915617 29.192264639582454 29.289674190222392 14 24.487683608833976 18.91745578264335 28.84060114851424 27.754259460008434 15 25.805803507362018 20.8876809594355 25.58131114314921 27.725204390053275 16 30.906072200524136 20.38491344194395 24.276747333490825 24.43226702404108 17 28.92070129577664 22.031117185102435 22.375848083491377 26.672333435629554 18 28.98777523386461 19.419914203646012 23.05122391170438 28.541086650784997 19 31.559987901080294 20.23142495689208 22.28060220827363 25.927984933754 20 31.342472286188023 20.463070696990503 22.81414690472984 25.380310112091635 21 31.66918727493912 19.40565160851605 24.388816889032153 24.53634422751268 22 30.240719929879255 19.31301097513319 24.373715317718073 26.072553777269487 23 28.03337358947129 22.252430271143854 24.130809634095993 25.583386505288864 24 28.2710687894236 20.842376245493263 24.40577303927954 26.480781925803598 25 27.05813001039889 21.482426760690878 23.483517429730224 27.97592579918001 26 26.732253997831908 21.282662115588842 23.16037912892194 28.824704757657315 27 28.05730648903922 19.279054517997142 22.88024939670989 29.783389596253752 28 28.950595341915914 21.8022091567627 22.251679608242277 26.99551589307911 29 28.893015081700824 20.44818990888277 23.05868638407888 27.600108625337523 30 28.25150739734133 21.063910114741034 23.044467945590185 27.640114542327453 31 30.951686010955264 21.04081619135722 21.724846721258995 26.28265107642852 32 31.476178595951275 20.239108212472924 22.849604687669036 25.43510850390676 33 31.24925761646866 20.499499926037625 23.076569823792923 25.17467263370079 34 27.383078733499218 23.390126133445786 25.587669699491975 23.63912543356302 35 29.07361574449201 23.380235045801477 24.297810051376253 23.24833915833026 36 29.30618877405709 23.21937240165764 21.849898329333477 25.62454049495179 37 28.918979186767135 23.949811561533384 22.27830606292763 24.85290318877185 38 30.474661815323678 23.21142420622918 22.541170548403404 23.77274343004374 39 29.788467609999714 21.58297143286093 21.953224869903494 26.675336087235863 40 27.522966973040162 22.732722058229363 23.12726164797001 26.617049320760465 41 27.147017329273865 21.930660826214915 22.622992804675306 28.299329039835914 42 25.914517158166884 19.924801239918487 24.488964151430785 29.671717450483847 43 25.8689916610183 20.117986545471407 26.110572645402303 27.902449148107998 44 26.44006950255336 20.606800564321876 24.90840808684728 28.044721846277486 45 27.398312774737104 20.533897949586365 24.057862862719208 28.009926412957327 46 26.646678427052123 22.088476662111173 23.932281374949497 27.332563535887207 47 27.512943415472048 22.45109100021416 24.67133107987274 25.364634504441053 48 27.496870398050042 22.05730207337509 25.021978968191767 25.423848560383107 49 27.17183336166718 22.09081696409844 23.62698235721398 27.1103673170204 50 25.283916164200885 22.80425581708553 24.791790397255223 27.12003762145836 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 19.0 8 38.0 9 35.0 10 32.0 11 52.5 12 73.0 13 342.5 14 612.0 15 1078.0 16 1544.0 17 2322.0 18 3100.0 19 2726.5 20 2353.0 21 2392.0 22 2431.0 23 2709.0 24 2987.0 25 3346.5 26 3706.0 27 5339.5 28 6973.0 29 7200.0 30 7427.0 31 9682.5 32 11938.0 33 13739.0 34 15540.0 35 18372.5 36 21205.0 37 26356.0 38 31507.0 39 33435.5 40 35364.0 41 40176.5 42 44989.0 43 46931.0 44 48873.0 45 54636.5 46 60400.0 47 62489.5 48 64579.0 49 76651.0 50 88723.0 51 95962.0 52 103201.0 53 111339.5 54 119478.0 55 127543.0 56 135608.0 57 146204.5 58 156801.0 59 179078.5 60 201356.0 61 203890.5 62 206425.0 63 209237.5 64 212050.0 65 208124.0 66 204198.0 67 174940.0 68 145682.0 69 124434.0 70 103186.0 71 88524.0 72 73862.0 73 64695.5 74 55529.0 75 46673.5 76 37818.0 77 36637.5 78 35457.0 79 24631.5 80 13806.0 81 8975.0 82 4144.0 83 2673.5 84 1203.0 85 782.5 86 362.0 87 216.5 88 71.0 89 48.0 90 25.0 91 15.0 92 5.0 93 4.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2264665.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.629901124391784 #Duplication Level Percentage of deduplicated Percentage of total 1 69.75933256872986 7.415348077091618 2 10.019791301761117 2.1301878164952304 3 3.732973009886657 1.1904340198535506 4 1.6696271593936052 0.7099188647581257 5 0.9154294882445035 0.4865462473195823 6 0.5786679195151947 0.36907096609824136 7 0.43020539185457196 0.3201128545016026 8 0.3468835595006165 0.29498703513349017 9 0.2992721725059695 0.2863110242718339 >10 7.737623413232803 23.030232164674334 >50 3.043392445059514 22.155377702064182 >100 1.3671078587684828 27.586314601973683 >500 0.06730377150860221 4.694935935050778 >1k 0.028604102891155937 6.522105663178743 >5k 0.00336518857543011 2.2446245547878436 >10k+ 4.2064857192876376E-4 0.5634924727471944 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 12602 0.5564619932749436 No Hit CCAGACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 8108 0.3580220474109857 No Hit CCAGACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 7116 0.3142186592719011 No Hit CCAGACGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 7016 0.30980299514497733 No Hit CCAGACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 6416 0.2833090103834342 No Hit CCAGACGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 5451 0.24069785155861906 No Hit CCAGACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 5450 0.2406536949173498 No Hit CCAGACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5344 0.23597309094281052 No Hit CCAGACGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 5298 0.23394188544442557 No Hit CCAGACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4894 0.2161026023716532 No Hit CCAGACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 4774 0.21080380541934457 No Hit CCAGACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 4748 0.20965573274634436 No Hit CCAGACGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 4729 0.20881675656222884 No Hit CCAGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4555 0.20113350098138133 No Hit CCAGACGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 4345 0.19186060631484128 No Hit CCAGACGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4004 0.17680319164203095 No Hit CCAGACGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 3932 0.17362391347064576 No Hit CCAGACGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 3367 0.14867541115352603 No Hit CCAGACGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 3251 0.14355324076629436 No Hit CCAGACGGGGGAGTGGCCTTGTTCTCGATACTTCGTTGTGGTTGTGAACT 3231 0.1426701079409096 No Hit CCAGACGGGCTCTCAGCTCCTGAAGGCAAATCCCAATTCCAGAGCAAGGA 3217 0.14205191496314024 No Hit CCAGACGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 3134 0.13838691373779347 No Hit CCAGACGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2965 0.13092444136329215 No Hit CCAGACGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 2910 0.12849582609348403 No Hit CCAGACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2836 0.12522823463956037 No Hit CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 2787 0.12306455921736768 No Hit CCAGACGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 2670 0.11789823218886679 No Hit CCAGACGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 2542 0.11224618210640426 No Hit CCAGACGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 2332 0.10297328743986418 No Hit CCAGACGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 2265 0.1000147924748252 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0011039160317309624 0.0 0.0 0.0 0.0 8 0.0012805425968079164 0.0 0.0 0.0 0.0 9 0.001677952368231063 0.0 0.0 0.0 0.0 10 0.009449521231617039 0.0 0.0 0.0 0.0 11 0.01792759635531083 0.0 0.0 0.0 0.0 12 0.025743321859966042 0.0 0.0 0.0 0.0 13 0.0333824207995443 0.0 0.0 0.0 0.0 14 0.04115398966293028 0.0 0.0 0.0 0.0 15 0.050603510894547316 0.0 0.0 0.0 0.0 16 0.05841923639920253 0.0 0.0 0.0 0.0 17 0.06499857594831907 0.0 0.0 0.0 0.0 18 0.07259351824662809 0.0 0.0 0.0 0.0 19 0.08146900314174503 0.0 0.0 0.0 0.0 20 0.08831328253847699 0.0 0.0 0.0 0.0 21 0.09427442910982418 0.0 0.0 0.0 0.0 22 0.09988232255101748 0.0 0.0 0.0 0.0 23 0.10778636133821116 0.0 0.0 0.0 0.0 24 0.11533714699525095 0.0 0.0 0.0 0.0 25 0.12275546272848302 0.0 0.0 0.0 0.0 26 0.12999715189663813 0.0 0.0 0.0 0.0 27 0.13909341999810126 0.0 0.0 0.0 0.0 28 0.15406252138837312 0.0 0.0 0.0 0.0 29 0.16245228322952843 0.0 0.0 0.0 0.0 30 0.172740780645261 0.0 0.0 0.0 0.0 31 0.1819253620292626 0.0 0.0 0.0 0.0 32 0.19124241333707193 0.0 0.0 0.0 0.0 33 0.198660729070304 0.0 0.0 0.0 0.0 34 0.20837519014953645 0.0 0.0 0.0 0.0 35 0.22312350833346212 0.0 0.0 0.0 0.0 36 0.2353548979650412 0.0 0.0 0.0 0.0 37 0.24471610591411974 0.0 0.0 0.0 0.0 38 0.25323833767908277 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATTAC 25 4.4442124E-5 44.0 32 TACGCTA 50 2.7284841E-11 44.0 41 CCCGTAA 25 4.4442124E-5 44.0 16 TATCGCG 30 2.52881E-6 44.0 11 CGATAAG 30 2.52881E-6 44.0 22 ACGGGAG 30290 0.0 41.893696 5 GACGGGA 80850 0.0 41.692516 4 CAGACGG 236455 0.0 41.674904 2 CCAGACG 237885 0.0 41.671314 1 AGACGGG 226570 0.0 41.60939 3 ACGGGAC 14015 0.0 41.535496 5 ACGGGTA 2405 0.0 41.530148 5 ACGGGGC 29020 0.0 41.490696 5 ACGGGAT 22875 0.0 41.412895 5 ACGGGGG 39065 0.0 41.3475 5 GACGGGG 117335 0.0 41.34129 4 ACGGGGA 30505 0.0 41.30995 5 CGGGATA 3050 0.0 41.259018 6 GACGGGT 11130 0.0 41.2327 4 ACGGGCT 9220 0.0 41.2321 5 >>END_MODULE