##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527410_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1824570 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.153325441062826 33.0 31.0 34.0 31.0 34.0 2 32.76603035235699 34.0 31.0 34.0 31.0 34.0 3 32.99570145294508 34.0 31.0 34.0 31.0 34.0 4 36.46706456863809 37.0 37.0 37.0 35.0 37.0 5 35.64915075880892 37.0 35.0 37.0 35.0 37.0 6 36.32909671867892 37.0 35.0 37.0 35.0 37.0 7 36.46744767260231 37.0 37.0 37.0 35.0 37.0 8 36.66255501296196 37.0 37.0 37.0 35.0 37.0 9 38.61472675753739 39.0 39.0 39.0 39.0 39.0 10 37.35487539529862 39.0 37.0 39.0 34.0 39.0 11 37.58542012638594 39.0 37.0 39.0 35.0 39.0 12 37.52287443068778 39.0 37.0 39.0 35.0 39.0 13 37.53660862559398 39.0 37.0 39.0 35.0 39.0 14 38.335969022838256 40.0 38.0 40.0 35.0 40.0 15 38.347507631935194 40.0 38.0 40.0 35.0 40.0 16 38.46425459149279 40.0 38.0 40.0 35.0 40.0 17 38.370280120795584 40.0 38.0 40.0 35.0 40.0 18 38.27980400861573 40.0 38.0 40.0 35.0 40.0 19 38.16622985141704 40.0 38.0 40.0 34.0 40.0 20 38.121392985744585 40.0 38.0 40.0 34.0 40.0 21 38.071882690168096 40.0 38.0 40.0 34.0 40.0 22 37.985860778155946 40.0 38.0 40.0 34.0 40.0 23 37.763206673353174 40.0 37.0 40.0 34.0 40.0 24 37.74227955079827 40.0 37.0 40.0 34.0 40.0 25 37.771878853647706 40.0 37.0 40.0 34.0 40.0 26 37.72496643044663 40.0 37.0 40.0 34.0 40.0 27 37.6637026806316 40.0 37.0 40.0 34.0 40.0 28 37.507168812377714 39.0 37.0 40.0 33.0 40.0 29 37.4295477838614 39.0 36.0 40.0 33.0 40.0 30 37.26942128830355 39.0 36.0 40.0 33.0 40.0 31 37.255331941224505 39.0 36.0 40.0 33.0 40.0 32 37.106824621691686 39.0 36.0 40.0 33.0 40.0 33 36.84895893278964 39.0 35.0 40.0 32.0 40.0 34 36.457545613487014 38.0 35.0 40.0 31.0 40.0 35 36.4110491787106 38.0 35.0 40.0 31.0 40.0 36 36.296913245312595 38.0 35.0 40.0 31.0 40.0 37 36.115389927489765 38.0 35.0 40.0 30.0 40.0 38 36.25762453619209 38.0 35.0 40.0 31.0 40.0 39 36.182933513101716 38.0 35.0 40.0 31.0 40.0 40 35.9347150287465 38.0 35.0 40.0 30.0 40.0 41 35.83638775163463 38.0 34.0 40.0 30.0 40.0 42 35.72665340326762 38.0 34.0 40.0 30.0 40.0 43 35.6384665976093 37.0 34.0 40.0 30.0 40.0 44 35.49198222046839 37.0 34.0 40.0 30.0 40.0 45 35.352021024131716 37.0 34.0 40.0 29.0 40.0 46 35.138839836235384 36.0 34.0 40.0 29.0 40.0 47 34.97728560701974 36.0 34.0 40.0 29.0 40.0 48 34.79154430907008 36.0 33.0 39.0 28.0 40.0 49 34.60016880689697 35.0 33.0 39.0 28.0 40.0 50 35.0386748658588 36.0 34.0 39.0 29.0 40.0 51 35.14896441353305 35.0 34.0 39.0 30.0 40.0 52 34.822549970678025 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 5.0 13 4.0 14 12.0 15 23.0 16 51.0 17 111.0 18 235.0 19 423.0 20 808.0 21 1203.0 22 1942.0 23 2942.0 24 4370.0 25 5963.0 26 8167.0 27 10907.0 28 14313.0 29 18976.0 30 24385.0 31 33797.0 32 47127.0 33 69083.0 34 123964.0 35 152802.0 36 241161.0 37 374182.0 38 580432.0 39 107180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.51462536378435 0.3500550814712508 0.0819371139501362 0.053382440794269334 8 99.30016387422789 0.5041735861052193 0.11147832091944951 0.0841842187474309 9 95.69273856305868 2.6389779509692697 0.6027721600157845 1.0655113259562528 10 50.99831741177373 35.58416503614551 5.441775322404731 7.975742229676033 11 33.544013109938234 22.47219892906274 22.77802441123114 21.20576354976789 12 26.128841316036105 17.9124944507473 28.428835287218355 27.529828945998236 13 23.79985421222535 17.729876080391545 29.241191075157435 29.229078632225676 14 24.624706095134744 18.835396833226458 28.765681777076242 27.774215294562556 15 25.758288254218805 20.880536235935043 25.69569816449903 27.66547734534712 16 30.947839764985723 20.31432063445086 24.230969488701447 24.50687011186197 17 28.886532169223432 22.01247417199669 22.359843689198 26.741149969581873 18 29.00508064913925 19.371577960834607 23.037427996733477 28.585913393292667 19 31.703634280953867 20.092460141293564 22.284757504507912 25.919148073244653 20 31.538389867201587 20.305935097036564 22.84998657217865 25.3056884635832 21 31.783159867804468 19.31704456392465 24.395501405810684 24.504294162460198 22 30.284340968008898 19.236313213524284 24.34732567125405 26.13202014721277 23 28.126901132869662 22.01965394586122 24.24341077623769 25.61003414503143 24 28.390963350268834 20.652756539897073 24.465819343735784 26.490460766098312 25 27.035685120329724 21.37944830836855 23.535134305617213 28.04973226568452 26 26.719775070290535 21.166466619532272 23.300394065451037 28.813364244726152 27 28.180064343927608 19.145113643214565 22.881117194736294 29.79370481812153 28 29.09277254366782 21.59369056818867 22.243213469475 27.070323418668508 29 28.88499756106918 20.326268655080376 23.13295735433554 27.6557764295149 30 28.324646355031597 20.83137396756496 23.142329425563283 27.70165025184016 31 31.01508848660232 20.85598250546704 21.792915591070773 26.33601341685986 32 31.53005913722137 20.11619176025036 22.936143858552974 25.417605243975295 33 31.226864411888826 20.347533939503553 23.22563672536543 25.19996492324219 34 27.501877154617254 23.15203034139551 25.601758222485298 23.744334281501946 35 29.063231336698507 23.173021588648286 24.319209457570825 23.444537617082382 36 29.45455641603227 23.084069123135862 21.85040858942107 25.610965871410794 37 29.0498583227829 23.781329299506186 22.329096718678922 24.83971565903199 38 30.549663756391915 23.115309360561668 22.594090662457454 23.74093622058896 39 29.742076215217832 21.347824418904178 22.114415999386157 26.79568336649183 40 27.66920425086459 22.514345845870533 23.171103328455473 26.64534657480941 41 27.18974881752961 21.813358763982745 22.704472834695295 28.292419583792345 42 26.2496917081833 19.722729190987465 24.554607386945964 29.472971713883272 43 25.93942682385439 19.837221920781335 26.265750286368846 27.957600968995433 44 26.47604641093518 20.483894835495487 25.000794707794167 28.03926404577517 45 27.540077936171265 20.345889716481143 24.11653156634166 27.997500781005936 46 26.76811522714941 21.94845908899083 23.974744734375772 27.30868094948399 47 27.63259288489891 22.201176167535365 24.771370788733783 25.394860158831946 48 27.56419320716662 21.834240396367363 25.226656143639325 25.374910252826695 49 27.347100960774316 21.78738004022866 23.771683191108043 27.093835807888983 50 25.29456255446489 22.85946825827455 24.81357251297566 27.032396674284897 51 26.287673260000986 22.610149240643 24.098116268490656 27.004061230865357 52 27.209917953271184 22.34093512444028 23.75480250141129 26.694344420877247 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 22.5 8 45.0 9 31.0 10 17.0 11 41.5 12 66.0 13 277.5 14 933.5 15 1378.0 16 2037.5 17 2697.0 18 2299.5 19 1902.0 20 1914.0 21 1926.0 22 1918.5 23 1911.0 24 2052.5 25 2194.0 26 3083.5 27 3973.0 28 4620.5 29 5268.0 30 6462.0 31 7656.0 32 9265.5 33 10875.0 34 11760.0 35 12645.0 36 16019.0 37 19393.0 38 21374.0 39 27860.0 40 32365.0 41 33913.0 42 35461.0 43 38015.5 44 40570.0 45 43327.0 46 46084.0 47 49061.0 48 52038.0 49 61904.0 50 71770.0 51 74499.5 52 77229.0 53 83725.5 54 90222.0 55 97627.0 56 105032.0 57 111512.0 58 117992.0 59 134645.0 60 151298.0 61 157970.0 62 164642.0 63 163198.0 64 159971.5 65 158189.0 66 140935.0 67 123681.0 68 109496.5 69 95312.0 70 78826.5 71 62341.0 72 55734.0 73 49127.0 74 42007.0 75 34887.0 76 34354.5 77 33822.0 78 24985.0 79 16148.0 80 10816.5 81 5485.0 82 3855.5 83 2226.0 84 1487.0 85 748.0 86 473.5 87 199.0 88 151.5 89 75.0 90 46.0 91 26.5 92 7.0 93 3.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1824570.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.240710213396174 #Duplication Level Percentage of deduplicated Percentage of total 1 64.56515670038688 5.966279029507895 2 10.1044119258056 1.8674388496630783 3 3.7127208257499023 1.0292453176198741 4 1.7690021750054024 0.6538734586436987 5 1.0379052803366484 0.4795490962272343 6 0.651230905708364 0.3610701648995111 7 0.5327815240601378 0.34462957696239066 8 0.46231378945885643 0.3417686204837074 9 0.42248047304976516 0.3513617660044271 >10 11.968559270914787 30.115411212456788 >50 3.1870732249712526 19.945032142556048 >100 1.4847505421658826 25.796753231758107 >500 0.06096801743193238 3.6548953805180364 >1k 0.037656716649134704 7.3060900765897925 >5k 0.0029886283054868816 1.7866020761094195 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 9209 0.5047216604460228 No Hit CCAGACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6801 0.37274535918051926 No Hit CCAGACGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 5934 0.32522731383284825 No Hit CCAGACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 5273 0.2889995999057312 No Hit CCAGACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5129 0.2811073293981595 No Hit CCAGACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4999 0.27398236296771294 No Hit CCAGACGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4846 0.26559682555341807 No Hit CCAGACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4511 0.24723633513649793 No Hit CCAGACGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4475 0.245263267509605 No Hit CCAGACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 4102 0.22482009459763122 No Hit CCAGACGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 4064 0.2227374121025776 No Hit CCAGACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3933 0.2155576382380506 No Hit CCAGACGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 3743 0.20514422576278246 No Hit CCAGACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3576 0.19599138427136256 No Hit CCAGACGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 3564 0.19533369506239828 No Hit CCAGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3500 0.1918260192812553 No Hit CCAGACGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 3333 0.1826731777898354 No Hit CCAGACGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 2931 0.16064058928953123 No Hit CCAGACGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 2706 0.14830891662145054 No Hit CCAGACGGGGGAGTGGCCTTGTTCTCGATACTTCGTTGTGGTTGTGAACTCT 2682 0.14699353820352193 No Hit CCAGACGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 2544 0.13943011230043242 No Hit CCAGACGGGCTCTCAGCTCCTGAAGGCAAATCCCAATTCCAGAGCAAGGAAA 2440 0.13373013915607512 No Hit CCAGACGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2390 0.1309897674520572 No Hit CCAGACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2374 0.13011284850677146 No Hit CCAGACGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2372 0.13000323363861074 No Hit CCAGACGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2364 0.12956477416596787 No Hit CCAGACGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 2171 0.11898693938845865 No Hit CCAGACGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTGC 2064 0.11312254394186026 No Hit CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 2054 0.11257446960105669 No Hit CCAGACGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 1870 0.10248990173027069 No Hit CCAGACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1841 0.1009004861419403 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0018086453246518358 0.0 0.0 0.0 0.0 8 0.002082682495053629 0.0 0.0 0.0 0.0 9 0.0023567196654554223 0.0 0.0 0.0 0.0 10 0.01107110168423245 0.0 0.0 0.0 0.0 11 0.02038836547789342 0.0 0.0 0.0 0.0 12 0.03019889617827762 0.0 0.0 0.0 0.0 13 0.03847481872441178 0.0 0.0 0.0 0.0 14 0.04888823119967992 0.0 0.0 0.0 0.0 15 0.059137221372706994 0.0 0.0 0.0 0.0 16 0.0668102621439572 0.0 0.0 0.0 0.0 17 0.07316792449727881 0.0 0.0 0.0 0.0 18 0.08138903960933261 0.0 0.0 0.0 0.0 19 0.0908159182711543 0.0 0.0 0.0 0.0 20 0.09958510772401169 0.0 0.0 0.0 0.0 21 0.10583315520917257 0.0 0.0 0.0 0.0 22 0.1117523580898513 0.0 0.0 0.0 0.0 23 0.11964462859742296 0.0 0.0 0.0 0.0 24 0.1278109362753964 0.0 0.0 0.0 0.0 25 0.13383975402423584 0.0 0.0 0.0 0.0 26 0.14167721709772713 0.0 0.0 0.0 0.0 27 0.14978871734162022 0.0 0.0 0.0 0.0 28 0.16634056243388853 0.0 0.0 0.0 0.0 29 0.173136684259853 0.0 0.0 0.0 0.0 30 0.1830568298283979 0.0 0.0 0.0 0.0 31 0.191168330072291 0.0 0.0 0.0 0.0 32 0.20043078643187162 0.0 0.0 0.0 0.0 33 0.20739133056007716 0.0 0.0 0.0 0.0 34 0.21774993560126496 0.0 0.0 0.0 0.0 35 0.23139698668727426 0.0 0.0 0.0 0.0 36 0.24208443633294421 0.0 0.0 0.0 0.0 37 0.25112766295620337 0.0 0.0 0.0 0.0 38 0.25951320037049824 0.0 0.0 0.0 0.0 39 0.2678987377847931 0.0 0.0 0.0 0.0 40 0.2751333190834005 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGCG 20 6.3124334E-4 46.000004 11 ATACTCG 30 1.8620085E-6 46.0 44 ACGGGAG 24670 0.0 43.6972 5 ACGGGTA 2150 0.0 43.64651 5 CAGACGG 190310 0.0 43.620354 2 CCAGACG 191510 0.0 43.60284 1 AGACGGG 182930 0.0 43.55704 3 GACGGGA 65925 0.0 43.54736 4 ACGGGGG 31140 0.0 43.496143 5 CGGGATA 2270 0.0 43.46696 6 CGGGAGT 7450 0.0 43.437584 6 ACGGGGC 23405 0.0 43.41551 5 GACGGGG 94370 0.0 43.394615 4 ACGGGAC 11695 0.0 43.325356 5 ACGGGAT 18620 0.0 43.220726 5 ACGGGGA 24760 0.0 43.129642 5 AGACGGA 4950 0.0 42.793938 3 GACGGGT 9145 0.0 42.7556 4 ACGGGGT 15385 0.0 42.681183 5 ACGGGAA 11285 0.0 42.657513 5 >>END_MODULE