##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527401_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 423577 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.792854663969006 31.0 31.0 34.0 30.0 34.0 2 32.337183085956035 33.0 31.0 34.0 31.0 34.0 3 32.768528508393985 34.0 31.0 34.0 31.0 34.0 4 36.59179322767761 37.0 37.0 37.0 35.0 37.0 5 36.54694423918201 37.0 37.0 37.0 35.0 37.0 6 35.85744976710256 37.0 35.0 37.0 35.0 37.0 7 36.53450022073908 37.0 37.0 37.0 35.0 37.0 8 36.757522245069964 37.0 37.0 37.0 36.0 37.0 9 38.79573961759019 39.0 39.0 39.0 39.0 39.0 10 37.98505112411675 39.0 38.0 39.0 35.0 39.0 11 37.920807787013935 39.0 37.0 39.0 35.0 39.0 12 37.7551661209178 39.0 37.0 39.0 35.0 39.0 13 37.74799151039834 39.0 37.0 39.0 35.0 39.0 14 38.52383391921658 40.0 39.0 40.0 35.0 40.0 15 38.622680173852686 40.0 39.0 40.0 35.0 40.0 16 38.748631299622026 40.0 39.0 40.0 35.0 40.0 17 38.710114099679636 40.0 39.0 40.0 35.0 40.0 18 38.620040748199266 40.0 38.0 40.0 35.0 40.0 19 38.556368735790656 40.0 38.0 40.0 35.0 40.0 20 38.51565122752179 40.0 38.0 40.0 35.0 40.0 21 38.480417964148195 40.0 38.0 40.0 35.0 40.0 22 38.472405253354175 40.0 38.0 40.0 35.0 40.0 23 38.37284838411906 40.0 38.0 40.0 35.0 40.0 24 38.32212088947228 40.0 38.0 40.0 35.0 40.0 25 38.31202591264398 40.0 38.0 40.0 35.0 40.0 26 38.25547893299211 40.0 38.0 40.0 35.0 40.0 27 38.208068426755936 40.0 38.0 40.0 35.0 40.0 28 38.116531350852384 40.0 38.0 40.0 35.0 40.0 29 38.0982749299419 40.0 38.0 40.0 34.0 40.0 30 37.98053246517162 40.0 38.0 40.0 34.0 40.0 31 37.957561435110975 40.0 38.0 40.0 34.0 40.0 32 37.844769664075244 40.0 38.0 40.0 34.0 40.0 33 37.62504338054238 40.0 37.0 40.0 33.0 40.0 34 37.36884675041374 40.0 36.0 40.0 33.0 40.0 35 37.249279351806166 39.0 36.0 40.0 33.0 40.0 36 37.222339739882 39.0 36.0 40.0 33.0 40.0 37 37.03220665900179 39.0 35.0 40.0 32.0 40.0 38 37.16667807742158 39.0 36.0 40.0 33.0 40.0 39 37.169241956008 39.0 36.0 40.0 33.0 40.0 40 36.978407703912154 39.0 35.0 40.0 32.0 40.0 41 36.85698468047132 39.0 35.0 40.0 32.0 40.0 42 36.757453780540494 39.0 35.0 40.0 32.0 40.0 43 36.71482162629227 39.0 35.0 40.0 32.0 40.0 44 36.59478678020761 39.0 35.0 40.0 31.0 40.0 45 36.47873704190737 39.0 35.0 40.0 31.0 40.0 46 36.32762166028845 38.0 35.0 40.0 31.0 40.0 47 36.16167072338678 38.0 35.0 40.0 31.0 40.0 48 36.02146717125812 38.0 35.0 40.0 31.0 40.0 49 35.83863146488124 37.0 35.0 40.0 30.0 40.0 50 36.10053898110615 38.0 35.0 40.0 31.0 40.0 51 36.1861479730958 37.0 35.0 40.0 32.0 40.0 52 35.869471194139436 37.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 3.0 15 5.0 16 9.0 17 17.0 18 27.0 19 55.0 20 113.0 21 196.0 22 288.0 23 458.0 24 657.0 25 998.0 26 1355.0 27 1967.0 28 2345.0 29 2959.0 30 4058.0 31 5443.0 32 7817.0 33 11273.0 34 23409.0 35 24540.0 36 39218.0 37 72014.0 38 174096.0 39 50255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.23012817032087 0.7143919523486875 0.026441473451108064 0.029038403879341892 8 99.3592664379794 0.4986106422208949 0.1111958392452848 0.03092708055442104 9 98.51243103379078 0.8444745583447637 0.2150730563746379 0.4280213514898118 10 61.209414108886925 31.42569119664193 2.50296876364864 4.861925930822495 11 35.01842640181124 26.676141527986648 21.842309662705954 16.463122407496158 12 29.52025251607146 19.111755359710276 25.900367583697886 25.46762454052038 13 24.039076720407387 18.451662861770117 29.345549923626635 28.16371049419586 14 26.06491853901416 18.651862589328505 28.8835323919854 26.399686479671935 15 26.259688321131698 19.091452085453177 26.988717517712246 27.660142075702883 16 29.617991534006805 20.128335580071628 25.02425769104555 25.22941519487602 17 29.685511725140884 20.797163207634032 23.539521739848954 25.97780332737613 18 29.850062680457157 19.81103789865833 22.34375331993947 27.995146100945046 19 27.590969292478107 20.029416139214355 23.73381935279772 28.64579521550981 20 27.89882359051601 21.53233060340859 24.112026856982318 26.45681894909308 21 28.695845147399414 19.59147923518038 25.4938299293871 26.21884568803311 22 29.504907018086442 19.525139466968223 24.743789204796293 26.22616431014904 23 29.273780209973626 21.856474737769048 22.865736336014468 26.004008716242854 24 27.272963357311657 21.70939404169726 23.499623445087906 27.51801915590318 25 26.8409285678873 21.74527889852376 21.88763790290785 29.526154630681077 26 26.67401676672718 23.173826718636754 22.640983811680048 27.511172702956017 27 27.322777204616873 20.20128571664656 24.786992683738728 27.68894439499784 28 28.532710699589448 20.928662321136418 22.170939404169726 28.367687575104412 29 28.314096374449036 20.38802862289501 23.213725013397802 28.08414998925815 30 27.655420384015184 20.06223189644386 24.82358579431839 27.458761925222568 31 29.714077959851455 21.299079034036314 21.658635856054506 27.32820715005772 32 29.221841601408954 22.29370338804987 22.692450251075954 25.79200475946522 33 31.11099044565687 19.892014911102347 22.717475217020755 26.279519426220027 34 29.77404344428522 21.17159335846847 25.14277215240676 23.911591044839543 35 28.457871886339436 23.55179813823697 24.8811904329083 23.10913954251529 36 29.54504139743187 21.579311435701182 21.79202364623197 27.083623520634976 37 27.789752512530193 24.087710144790677 22.985195135713223 25.13734220696591 38 30.62182318681137 22.136943224018303 23.146204822263723 24.095028766906605 39 29.56841377128598 20.406443220477033 21.50045918451663 28.524683823720366 40 28.235716292433256 22.45093572125021 21.798397930010363 27.514950056306176 41 25.508939342787734 23.51969063476062 22.959225831430885 28.01214419102076 42 26.76656192380606 21.051190220432176 22.76823340266351 29.414014453098257 43 26.911045689449615 20.06270406561263 25.166852780014022 27.859397464923735 44 26.78639302889439 19.306052972659042 25.76296635558588 28.144587642860685 45 27.011853806981968 20.181218526973844 24.866081019507668 27.94084664653652 46 29.296208245490195 22.274580536714694 22.59659990981569 25.832611307979427 47 26.06208552400154 22.710628764073594 24.113679449073015 27.113606262851853 48 27.90118443635986 21.82956109514917 23.682825082570584 26.586429385920386 49 27.828470384369314 21.802647452529293 23.598778970529562 26.77010319257184 50 24.822641455980847 23.97651430554539 24.93667031023875 26.264173928235007 51 25.70087610989265 24.52989657134358 22.333601682810915 27.43562563595285 52 28.52987768457683 22.588100864777832 22.340920304926847 26.54110114571849 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 1.0 6 0.0 7 1.0 8 2.0 9 43.0 10 84.0 11 275.0 12 466.0 13 555.0 14 519.0 15 394.0 16 416.5 17 439.0 18 377.0 19 315.0 20 355.0 21 395.0 22 507.5 23 620.0 24 729.0 25 838.0 26 1359.0 27 1880.0 28 2184.5 29 2489.0 30 2697.0 31 2905.0 32 3886.0 33 4867.0 34 4990.5 35 5114.0 36 5845.5 37 6577.0 38 7372.0 39 9039.0 40 9911.0 41 10133.0 42 10355.0 43 11312.5 44 12270.0 45 13970.0 46 15670.0 47 17013.5 48 18357.0 49 20102.5 50 21848.0 51 22348.5 52 22849.0 53 25421.5 54 27994.0 55 30947.5 56 33901.0 57 37844.5 58 41788.0 59 40857.0 60 39926.0 61 37087.0 62 34248.0 63 31292.0 64 25164.5 65 21993.0 66 17918.5 67 13844.0 68 14699.5 69 15555.0 70 11786.0 71 8017.0 72 6534.0 73 5051.0 74 4004.0 75 2957.0 76 2064.5 77 1172.0 78 807.0 79 442.0 80 466.0 81 490.0 82 402.5 83 315.0 84 200.0 85 85.0 86 44.0 87 3.0 88 1.5 89 1.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 423577.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.733059160436001 #Duplication Level Percentage of deduplicated Percentage of total 1 65.88643364785214 6.412765565646859 2 9.270623620442914 1.8046305630381252 3 3.308511412423897 0.9660581193029838 4 1.3995682441118684 0.544883220760334 5 0.8586605865088413 0.41786971436126136 6 0.5869939602687559 0.3427948165268653 7 0.5287796832173091 0.36026507577134737 8 0.46086302665728773 0.358848568265038 9 0.41720231886870257 0.365458936627815 >10 12.535474325078225 33.33301855388749 >50 3.141145365900987 20.693049905920294 >100 1.5256991777233366 26.917892142396777 >500 0.05578868217430325 3.503023063103049 >1k 0.024255948771436196 3.9794417543917633 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AACCTAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAG 4436 1.047271216331387 No Hit AACCTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 1990 0.46980832292593794 No Hit AACCTAGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAGG 1942 0.458476262875463 No Hit AACCTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1423 0.33594836357970337 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1390 0.32815757229500186 No Hit AACCTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1272 0.30029959133758444 No Hit AACCTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1227 0.2896757850402642 No Hit AACCTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1138 0.2686642570300087 No Hit AACCTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1033 0.2438753756695949 No Hit AACCTAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1005 0.23726500730681788 No Hit AACCTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 899 0.21224004136201918 No Hit AACCTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 876 0.20681009592116664 No Hit AACCTAGGGGACAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAAGC 798 0.18839549833914493 No Hit AACCTAGGGGAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAAGCAC 752 0.17753560745743985 No Hit AACCTAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 742 0.1751747616135909 No Hit AACCTAGGGGGACCCTCGGCTCCGGAGCGGCAGTGCCGTCCCTCTCGGCGCC 700 0.1652592090694254 No Hit AACCTAGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCC 698 0.16478703990065563 No Hit AACCTAGGGGGCATGATTCAGACTGGATACTCTCAGTGCCAGCCAAATTACC 688 0.16242619405680667 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 657 0.155107571940875 No Hit AACCTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 656 0.1548714873564901 No Hit AACCTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 650 0.15345497985018072 No Hit AACCTAGGGGCCCTAGCGACCTGTGCCGGGATCTTCGGAGCCGCAACCGACC 645 0.15227455692825625 No Hit AACCTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 633 0.14944154191563755 No Hit AACCTAGGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGAT 594 0.1402342431246267 No Hit AACCTAGGGAAAGATGATCGAGAGGGTCGATTCGTCCTTAAGAACGAGAATG 583 0.13763731269639287 No Hit AACCTAGGGGCTGGGCAGTGGTGGCGCACGCCTTTAATCCCAGTACATGGGA 569 0.13433212851500434 No Hit AACCTAGGGGTCCGCAAAGCAGGAGCTGGGGACTAGACCGCACTCGGACCTG 552 0.13031869058046117 No Hit AACCTAGGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACTC 547 0.1291382676585367 No Hit AACCTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 539 0.12724959098345756 No Hit AACCTAGGGGAGCGCGGCTAGAATCTGCCAACGAGTCGCGTAGTAGCCCTAT 524 0.12370832221768416 No Hit AACCTAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 519 0.12252789929575968 No Hit AACCTAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 511 0.12063922262068054 No Hit AACCTAGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 506 0.11945879969875606 No Hit AACCTAGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 497 0.11733403843929202 No Hit AACCTAGGGGAGCTCTTTCCCTCTCGTCTCTATGGTTGCGCCGGCGTTGTCA 497 0.11733403843929202 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGACTGCTCT 486 0.11473710801105821 No Hit AACCTAGGGATATTCGTAGGAGTAAACATAACATTCTTCCCTCAACATTTCC 473 0.1116680084140546 No Hit AACCTAGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACT 471 0.1111958392452848 No Hit AACCTAGGGGACGTAGCGCATCCGCTTGCCGGGAGGAACCAAGCTACGGCGG 469 0.11072367007651501 No Hit AACCTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 469 0.11072367007651501 No Hit AACCTAGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 464 0.10954324715459056 No Hit AACCTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 451 0.10647414755758694 No Hit AACCTAGGGAAGAGCTGCGTCTAGAGACTCCGCTGGGTCAGGCTGAGGGTGC 434 0.10246070962304375 No Hit AACCTAGGGGCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCATGA 427 0.1008081175323495 No Hit AACCTAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 427 0.1008081175323495 No Hit AACCTAGGGAGTGCGAGATCCGCTGCTGCCGAGGAGAGGAGCGTCAACTGCG 426 0.10057203294796459 No Hit AACCTAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 425 0.10033594836357972 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.028094065541802316 0.0 0.0 0.0 0.0 7 0.028566234710572104 0.0 0.0 0.0 0.0 8 0.028566234710572104 0.0 0.0 0.0 0.0 9 0.028802319294956996 0.0 0.0 0.0 0.0 10 0.037537448917198055 0.0 0.0 0.0 0.0 11 0.05429945440852549 0.0 0.0 0.0 0.0 12 0.0644510915370759 0.0 0.0 0.0 0.0 13 0.07011712156231334 0.0 0.0 0.0 0.0 14 0.08050484327524865 0.0 0.0 0.0 0.0 15 0.08853171914433504 0.0 0.0 0.0 0.0 16 0.09655859501342141 0.0 0.0 0.0 0.0 17 0.10222462503865885 0.0 0.0 0.0 0.0 18 0.10718240131074161 0.0 0.0 0.0 0.0 19 0.11638970010175245 0.0 0.0 0.0 0.0 20 0.12347223763329926 0.0 0.0 0.0 0.0 21 0.12984652141169137 0.0 0.0 0.0 0.0 22 0.1362208051900835 0.0 0.0 0.0 0.0 23 0.14259508896847561 0.0 0.0 0.0 0.0 24 0.14944154191563752 0.0 0.0 0.0 0.0 25 0.15581582569402966 0.0 0.0 0.0 0.0 26 0.16313444780996136 0.0 0.0 0.0 0.0 27 0.17068915451027794 0.0 0.0 0.0 0.0 28 0.18272946831390752 0.0 0.0 0.0 0.0 29 0.1898120058454543 0.0 0.0 0.0 0.0 30 0.19854713546769537 0.0 0.0 0.0 0.0 31 0.20586575758362707 0.0 0.0 0.0 0.0 32 0.21601739471217749 0.0 0.0 0.0 0.0 33 0.22097517098426023 0.0 0.0 0.0 0.0 34 0.22711337017826747 0.0 0.0 0.0 0.0 35 0.24552796776028915 0.0 0.0 0.0 0.0 36 0.2575682815639187 0.0 0.0 0.0 0.0 37 0.2648869036798504 0.0 0.0 0.0 0.0 38 0.2726776949645519 0.0 0.0 0.0 0.0 39 0.279051978742944 0.0 0.0 0.0 0.0 40 0.28920361587149446 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGATATC 20 6.3069176E-4 46.000004 17 ATAGGAC 20 6.3069176E-4 46.000004 31 CGCATTG 20 6.3069176E-4 46.000004 18 TAACGGC 40 5.5970304E-9 46.000004 35 ATACTAA 20 6.3069176E-4 46.000004 37 AACGGTT 20 6.3069176E-4 46.000004 46 TGGTTAC 20 6.3069176E-4 46.000004 11 ACTAGCA 20 6.3069176E-4 46.000004 41 GTTCGAT 20 6.3069176E-4 46.000004 13 CGAATTA 20 6.3069176E-4 46.000004 26 CATACGA 20 6.3069176E-4 46.000004 17 CATACCG 20 6.3069176E-4 46.000004 27 TCCGTAT 20 6.3069176E-4 46.000004 23 TTAGTCT 20 6.3069176E-4 46.000004 20 TTAGTAC 20 6.3069176E-4 46.000004 20 TTCGGGA 20 6.3069176E-4 46.000004 11 TAAGGTA 40 5.5970304E-9 46.000004 34 ATACGAT 20 6.3069176E-4 46.000004 18 AATACTA 20 6.3069176E-4 46.000004 36 TCGAATT 20 6.3069176E-4 46.000004 42 >>END_MODULE