##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527354_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 481083 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.697233117778012 31.0 30.0 33.0 25.0 33.0 2 31.00827300070882 31.0 31.0 33.0 28.0 34.0 3 31.97507290841705 31.0 31.0 34.0 31.0 34.0 4 36.238590846070224 37.0 37.0 37.0 35.0 37.0 5 33.871814219168 35.0 33.0 35.0 32.0 35.0 6 35.30905893577616 35.0 35.0 37.0 35.0 37.0 7 36.066277544623276 37.0 35.0 37.0 35.0 37.0 8 36.55292745742419 37.0 37.0 37.0 35.0 37.0 9 38.51437485839242 39.0 39.0 39.0 37.0 39.0 10 36.00936220984737 38.0 35.0 39.0 31.0 39.0 11 36.387812498051275 37.0 35.0 39.0 31.0 39.0 12 36.23534192644512 37.0 35.0 39.0 32.0 39.0 13 36.58824776597801 38.0 35.0 39.0 33.0 39.0 14 37.37059093753053 39.0 37.0 40.0 33.0 40.0 15 37.445199684877664 39.0 37.0 40.0 33.0 40.0 16 37.5767965195195 39.0 37.0 40.0 33.0 40.0 17 37.51515434966524 39.0 37.0 40.0 33.0 40.0 18 37.3484055765845 39.0 36.0 40.0 33.0 40.0 19 37.27848417009123 39.0 36.0 40.0 33.0 40.0 20 37.05879858569104 38.0 36.0 40.0 33.0 40.0 21 36.97549695166946 38.0 36.0 40.0 33.0 40.0 22 36.83368566338864 38.0 35.0 40.0 32.0 40.0 23 36.591488371029534 38.0 35.0 40.0 32.0 40.0 24 36.5089204981261 38.0 35.0 40.0 32.0 40.0 25 36.31886389666648 38.0 35.0 39.0 31.0 40.0 26 35.73967693724368 38.0 34.0 39.0 30.0 40.0 27 35.61152233606259 37.0 34.0 39.0 30.0 40.0 28 35.53762656339966 37.0 34.0 38.0 30.0 40.0 29 35.26373411656616 37.0 34.0 38.0 30.0 40.0 30 34.97643026255345 36.0 34.0 38.0 30.0 40.0 31 34.91220849624701 36.0 33.0 38.0 30.0 39.0 32 34.83829401579353 36.0 33.0 38.0 29.0 39.0 33 34.325929205563284 36.0 33.0 38.0 29.0 39.0 34 33.872855619508485 35.0 32.0 38.0 27.0 39.0 35 33.687315910144406 35.0 32.0 38.0 27.0 39.0 36 33.461074284478975 35.0 32.0 38.0 27.0 39.0 37 33.317913956635344 34.0 31.0 37.0 27.0 38.0 38 32.98968992876489 34.0 31.0 37.0 26.0 38.0 39 32.21430189800928 34.0 30.0 37.0 24.0 38.0 40 31.883454622175382 33.0 30.0 36.0 24.0 38.0 41 31.687789840838274 33.0 30.0 36.0 24.0 38.0 42 31.410864653292673 33.0 29.0 36.0 23.0 38.0 43 30.811082495120385 32.0 29.0 35.0 23.0 38.0 44 30.40602349282764 32.0 28.0 35.0 23.0 37.0 45 29.84808026889331 31.0 27.0 34.0 21.0 37.0 46 29.71740843056188 31.0 27.0 34.0 21.0 37.0 47 29.199849090489582 31.0 26.0 34.0 20.0 36.0 48 28.691986621851115 30.0 26.0 34.0 20.0 36.0 49 28.23646855116477 30.0 26.0 33.0 19.0 35.0 50 31.962513745029444 34.0 30.0 36.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 6.0 14 7.0 15 19.0 16 46.0 17 84.0 18 141.0 19 224.0 20 406.0 21 547.0 22 804.0 23 1203.0 24 1917.0 25 2843.0 26 4150.0 27 5727.0 28 7947.0 29 10611.0 30 14739.0 31 20914.0 32 33395.0 33 50072.0 34 70850.0 35 124639.0 36 114769.0 37 14723.0 38 295.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.08290253448989 0.7260701375854063 0.12492646798993107 0.06610085993477216 8 99.2847388080643 0.35544802040396356 0.10538722008468393 0.2544259514470476 9 95.87493218425927 2.5161978286491102 0.5121777323247756 1.096692254766849 10 43.426394198090556 46.33254552748694 4.113011684054518 6.128048590367982 11 35.33132536381456 20.85211907300819 29.844330396210218 13.97222516696703 12 28.166241584092553 20.21459914401465 25.50142075275992 26.11773851913287 13 25.11125938767323 19.344686883552317 31.5405034058572 24.003550322917253 14 26.656730751242506 19.403720355946895 28.79690198988532 25.142646902925275 15 27.980826593332125 22.244186554087342 28.49196500395982 21.283021848620717 16 31.47939129006845 24.945383644818044 23.652675317980474 19.92254974713303 17 30.21952552885885 22.430017273526605 24.777013529889853 22.573443667724696 18 27.897057264546866 25.094422376180407 25.217893793794417 21.790626565478306 19 28.903952124685343 23.48160296663985 25.929621291960014 21.684823616714787 20 27.58297424768699 26.639685875410272 24.093763446224457 21.68357643067828 21 27.92096166357988 26.0551713529682 26.68832613083397 19.335540852617946 22 28.004730992365147 22.43209591692078 28.164786533716637 21.398386556997444 23 25.80427909529125 24.495149485639693 28.256662571739184 21.44390884732988 24 26.7444495024767 23.06878438855665 26.44366980333955 23.743096305627095 25 24.31991984751072 27.37157621449937 25.270691336006468 23.037812601983443 26 23.643321422706684 27.081189732333087 25.26778123525462 24.0077076097056 27 23.813354452350218 26.519124558548107 26.962707058865103 22.70481393023657 28 23.44003009875635 25.86913276918952 25.233899347929565 25.456937784124566 29 25.394786346638732 26.161182166071136 24.651255604542254 23.792775882747883 30 26.8606456682111 24.041173768351822 27.63660324725671 21.461577316180367 31 26.504781919128302 25.16821421667363 25.256348696586663 23.07065516761141 32 30.245716435625454 23.760764774477586 24.77410342913801 21.21941536075895 33 27.69833895606372 25.215607286060827 24.962012791971446 22.124040965904012 34 24.507413481665328 26.347636478528653 28.838682722108246 20.306267317697777 35 23.97528077275647 28.500487441875933 27.300070881739742 20.224160903627855 36 26.36883864114924 26.780202168856515 24.030988415720365 22.81997077427388 37 24.15882498446214 28.456004473240586 25.0836134305307 22.301557111766577 38 27.296121459290806 27.51999135284348 24.3718859323651 20.812001255500608 39 26.837364862196335 26.637815096355517 23.99128632689162 22.53353371455653 40 26.223125739217558 25.291062041269385 24.03369065213279 24.452121567380264 41 21.94985064947213 28.669689014161797 24.955776861788923 24.42468347457715 42 23.21158718973649 24.97427678799708 25.94022237327031 25.873913648996123 43 22.687769054404335 24.736479983703436 25.504330853511764 27.07142010838047 44 23.857837420985568 25.16800635233421 25.938351594215554 25.03580463246467 45 24.84768740529181 25.11001220163672 26.26532220011931 23.776978192952154 46 25.256556560926075 27.562187813745236 25.598077670589063 21.583177954739618 47 22.548915675673427 26.84942099388255 26.935892559080244 23.66577077136378 48 24.7728562431015 24.897782711091434 25.007535082303882 25.32182596350318 49 26.271973858980672 25.73630745630172 24.989450884774563 23.002267799943045 50 24.371470203686265 24.729828324842078 25.95061559024118 24.948085881230476 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 0.0 11 1.5 12 3.0 13 272.0 14 541.0 15 993.5 16 1446.0 17 1573.5 18 1701.0 19 1556.5 20 1412.0 21 1352.0 22 1292.0 23 1434.5 24 1577.0 25 1715.5 26 1854.0 27 2433.5 28 3013.0 29 3227.0 30 3441.0 31 4371.5 32 5302.0 33 6532.0 34 7762.0 35 8239.0 36 8716.0 37 10255.0 38 11794.0 39 13573.5 40 15353.0 41 16520.5 42 17688.0 43 17809.5 44 17931.0 45 19188.0 46 20445.0 47 21247.0 48 22049.0 49 24781.5 50 27514.0 51 28443.5 52 29373.0 53 29694.5 54 30016.0 55 32069.5 56 34123.0 57 33390.5 58 32658.0 59 35195.5 60 37733.0 61 37092.5 62 36452.0 63 34383.5 64 32315.0 65 31139.0 66 29963.0 67 24374.0 68 18785.0 69 14849.5 70 10914.0 71 8692.5 72 6471.0 73 5235.5 74 4000.0 75 4143.5 76 4287.0 77 3213.0 78 2139.0 79 1324.5 80 510.0 81 497.0 82 484.0 83 246.5 84 9.0 85 6.5 86 4.0 87 3.5 88 3.0 89 3.5 90 4.0 91 4.5 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 481083.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.61625540707113 #Duplication Level Percentage of deduplicated Percentage of total 1 71.62492902316292 7.603885400232392 2 10.453664362774852 2.2195754163003056 3 3.594854424059679 1.1449167815117143 4 1.630998766471521 0.6926039789391851 5 0.8341002095040432 0.442751042959323 6 0.5188651537994635 0.33050429967386086 7 0.33873083625398936 0.2517237150346198 8 0.272159458030662 0.23114514543228507 9 0.2525796409061539 0.24133049806374368 >10 5.781919996867229 16.99124683266713 >50 2.580619897010162 19.195648152189953 >100 2.0558807980733462 44.22500899013268 >500 0.04503357938636853 3.054566467740494 >1k 0.01370587198715564 2.2846369545379903 >5k 0.001957981712450806 1.0904563245843233 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5246 1.0904563245843233 No Hit AGGGTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2541 0.5281832864599249 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 2400 0.4988744146020541 No Hit AGGGTCGGGGGCCTTTCAGGAATACCACGACGCTACTCAGACTACCCAGA 1362 0.28311123028666574 No Hit AGGGTCGGGACCACGACGCTACTCAGACTACCCAGATGCTTACACCACAT 1359 0.28248763726841314 No Hit AGGGTCGGGGCAGTGAATCTCTCTTCATCTCTAACCATGCCTACTAACCA 1298 0.26980791256394426 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1024 0.2128530835635431 No Hit AGGGTCGGGATTACCACCTGCTGTCTGACCCCTGTGCTGATGAATAATCA 1007 0.20931938979344522 No Hit AGGGTCGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 997 0.20724074639926998 No Hit AGGGTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 985 0.20474637432625972 No Hit AGGGTCGGGGGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAG 930 0.19331383565829596 No Hit AGGGTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 860 0.1787633318990694 No Hit AGGGTCGGGATCTTCATATGTGTGACTTTATGTGTGTAGCTAACCAATGC 808 0.1679543862493582 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTAC 688 0.1430106655192555 No Hit AGGGTCGGGAGTTCCAGGACAGACATGGCTACATCAAGAAACCCTGTCTG 614 0.12762870440235885 No Hit AGGGTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGC 607 0.12617365402643618 No Hit AGGGTCGGGGGAGCCGGTCTATTTCTAGTTCTTAAACTTTGGGATAGGAG 591 0.12284782459575583 No Hit AGGGTCGGGACAATTGAGAAACAGACTACCTGTAGCAATTATTCCAATGG 590 0.1226399602563383 No Hit AGGGTCGGGAGCTGAGCCCTGACTGTCCAGATCAGGTGGCTGCGTAGGTA 578 0.12014558818332803 No Hit AGGGTCGGGGTGAGCCCTCTCACGCACCCCCTGCCCAGTCCTTTTCTCAC 571 0.11869053780740536 No Hit AGGGTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGGACTGCT 567 0.11785908044973528 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTG 553 0.11494897969788996 No Hit AGGGTCGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 550 0.11432538667963739 No Hit AGGGTCGGGGATGTATGAAGGCTTTGGTCTCCCTGGGAGGGGGTTGAGGT 546 0.11349392932196731 No Hit AGGGTCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 544 0.11307820064313226 No Hit AGGGTCGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 537 0.1116231502672096 No Hit AGGGTCGGGAGCTGGCAAATTGCTCTCTTACCCTGTTCTTGCTGGTGCAG 523 0.10871304951536429 No Hit AGGGTCGGGGCTCCGAGTCCGCCATTTTGGCTGCCTCTGTCGGTCTTTTC 522 0.10850518517594678 No Hit AGGGTCGGGAGTCAATGATATAGAGTTATTTATTTGCTACATAATAGACA 521 0.10829732083652925 No Hit AGGGTCGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 508 0.10559508442410145 No Hit AGGGTCGGGGTGATGGTGGTGGTGGTAGGGGTACGCTTAGGTGGGCAGTC 505 0.10497149140584888 No Hit AGGGTCGGGGTATGTATGCACACCTGTTCATCTGTGAAGGATGTGTGTGT 491 0.10206139065400356 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0010393216970876128 0.0 0.0 0.0 0.0 8 0.0012471860365051352 0.0 0.0 0.0 0.0 9 0.0018707790547577029 0.0 0.0 0.0 0.0 10 0.012263996025633831 0.0 0.0 0.0 0.0 11 0.018084197529324463 0.0 0.0 0.0 0.0 12 0.02369653469359757 0.0 0.0 0.0 0.0 13 0.028685278839618113 0.0 0.0 0.0 0.0 14 0.0378313097739891 0.0 0.0 0.0 0.0 15 0.047600933726612664 0.0 0.0 0.0 0.0 16 0.059657065412828975 0.0 0.0 0.0 0.0 17 0.06672445295302473 0.0 0.0 0.0 0.0 18 0.07358397615380298 0.0 0.0 0.0 0.0 19 0.08044349935458123 0.0 0.0 0.0 0.0 20 0.087510886894777 0.0 0.0 0.0 0.0 21 0.09437041009555523 0.0 0.0 0.0 0.0 22 0.09977488292041083 0.0 0.0 0.0 0.0 23 0.1033085766905087 0.0 0.0 0.0 0.0 24 0.11037596423070448 0.0 0.0 0.0 0.0 25 0.11681975875264768 0.0 0.0 0.0 0.0 26 0.12367928195342591 0.0 0.0 0.0 0.0 27 0.13282531288779692 0.0 0.0 0.0 0.0 28 0.13947697174915763 0.0 0.0 0.0 0.0 29 0.14987018872003377 0.0 0.0 0.0 0.0 30 0.1575611692784821 0.0 0.0 0.0 0.0 31 0.1642128281398428 0.0 0.0 0.0 0.0 32 0.1725274017165437 0.0 0.0 0.0 0.0 33 0.18001051793557452 0.0 0.0 0.0 0.0 34 0.1862464481181002 0.0 0.0 0.0 0.0 35 0.19767898678606394 0.0 0.0 0.0 0.0 36 0.2111901688482029 0.0 0.0 0.0 0.0 37 0.21825755638839867 0.0 0.0 0.0 0.0 38 0.22719572298335214 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAT 80 0.0 44.000004 11 AACCGCA 20 7.851911E-4 44.000004 32 GTACCGC 20 7.851911E-4 44.000004 9 TACCCGT 20 7.851911E-4 44.000004 25 AAATCGC 40 8.294592E-9 44.000004 29 AAATCCG 20 7.851911E-4 44.000004 38 ACCGGCG 20 7.851911E-4 44.000004 29 CGTATCG 20 7.851911E-4 44.000004 6 CTACTCG 20 7.851911E-4 44.000004 35 GTCGAGT 20 7.851911E-4 44.000004 4 AATCACC 20 7.851911E-4 44.000004 32 GATCGAC 20 7.851911E-4 44.000004 9 CGACGGC 40 8.294592E-9 44.000004 44 CGACGCA 20 7.851911E-4 44.000004 18 TAGACGA 20 7.851911E-4 44.000004 15 CGTGATG 20 7.851911E-4 44.000004 38 ACCGCAG 20 7.851911E-4 44.000004 11 CGTTGTG 20 7.851911E-4 44.000004 16 CGTTGCG 20 7.851911E-4 44.000004 15 TCCCTCG 20 7.851911E-4 44.000004 42 >>END_MODULE