##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527341_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 383704 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.801719554656714 31.0 31.0 34.0 30.0 34.0 2 32.23248389383483 33.0 31.0 34.0 31.0 34.0 3 32.69657600650501 34.0 31.0 34.0 31.0 34.0 4 36.23483466422034 37.0 37.0 37.0 35.0 37.0 5 36.44049319266935 37.0 37.0 37.0 35.0 37.0 6 36.53193086337385 37.0 37.0 37.0 35.0 37.0 7 36.56579550903822 37.0 37.0 37.0 35.0 37.0 8 36.670899964556014 37.0 37.0 37.0 35.0 37.0 9 38.63436138273252 39.0 39.0 39.0 39.0 39.0 10 37.39252392469195 39.0 37.0 39.0 34.0 39.0 11 37.643548151700266 39.0 37.0 39.0 35.0 39.0 12 37.26248097491817 39.0 37.0 39.0 35.0 39.0 13 37.17941173404499 39.0 37.0 39.0 35.0 39.0 14 37.837345975022416 40.0 37.0 40.0 34.0 40.0 15 37.920404791193214 40.0 37.0 40.0 34.0 40.0 16 38.00221003690345 40.0 37.0 40.0 35.0 40.0 17 37.893133769780874 40.0 37.0 40.0 34.0 40.0 18 37.76286668890603 40.0 36.0 40.0 34.0 40.0 19 37.58834674645039 40.0 36.0 40.0 33.0 40.0 20 37.51603840460355 39.0 36.0 40.0 33.0 40.0 21 37.483714008715054 39.0 36.0 40.0 33.0 40.0 22 37.54836540666764 39.0 36.0 40.0 33.0 40.0 23 37.43020140524988 39.0 36.0 40.0 33.0 40.0 24 37.492369117861685 39.0 36.0 40.0 34.0 40.0 25 37.538910201613746 39.0 36.0 40.0 34.0 40.0 26 37.50592383712445 39.0 36.0 40.0 34.0 40.0 27 37.44270583574839 39.0 35.0 40.0 34.0 40.0 28 37.27878260325668 39.0 35.0 40.0 33.0 40.0 29 37.24562944352939 39.0 35.0 40.0 33.0 40.0 30 37.04240247690928 39.0 35.0 40.0 32.0 40.0 31 37.07105998373746 39.0 35.0 40.0 33.0 40.0 32 36.93832224839981 39.0 35.0 40.0 33.0 40.0 33 36.73122771719867 38.0 35.0 40.0 32.0 40.0 34 36.239510143235414 38.0 35.0 40.0 31.0 40.0 35 36.17317254967371 38.0 35.0 40.0 31.0 40.0 36 36.11332954569147 38.0 35.0 40.0 30.0 40.0 37 36.14390259158101 38.0 35.0 40.0 31.0 40.0 38 36.346566624272874 38.0 35.0 40.0 31.0 40.0 39 36.33173487896921 38.0 35.0 40.0 31.0 40.0 40 36.16952911619373 38.0 35.0 40.0 31.0 40.0 41 36.121088130433876 38.0 35.0 40.0 31.0 40.0 42 35.99848581198007 38.0 35.0 40.0 31.0 40.0 43 35.91001396910118 38.0 35.0 40.0 31.0 40.0 44 35.818232283218315 38.0 35.0 40.0 31.0 40.0 45 35.67061067906511 37.0 34.0 40.0 30.0 40.0 46 35.39738704834977 37.0 34.0 40.0 30.0 40.0 47 35.20520244772012 37.0 34.0 40.0 29.0 40.0 48 34.99649730000208 36.0 34.0 40.0 28.0 40.0 49 34.957581886037154 36.0 34.0 40.0 29.0 40.0 50 35.41996955986907 36.0 34.0 40.0 30.0 40.0 51 35.59596459771073 36.0 35.0 40.0 31.0 40.0 52 35.29806569647437 36.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 6.0 14 13.0 15 18.0 16 24.0 17 41.0 18 80.0 19 105.0 20 177.0 21 318.0 22 465.0 23 697.0 24 972.0 25 1242.0 26 1700.0 27 2126.0 28 2836.0 29 3866.0 30 5240.0 31 7598.0 32 10861.0 33 17512.0 34 37553.0 35 28186.0 36 39372.0 37 70131.0 38 133198.0 39 19364.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 98.7526843608615 1.0518524696119924 0.10502887642557805 0.09043429310093197 8 98.44098575985656 0.3236870087359006 0.11936284219085545 1.115964389216688 9 96.51215520296896 2.235838041823906 0.3523549402664554 0.8996518149406835 10 51.021620832725226 35.12577403415133 4.421898129808394 9.430707003315057 11 37.82915997748264 20.527020828555344 23.5978775305965 18.04594166336551 12 34.42419156433083 15.287304797448034 25.43392823634885 24.854575401872275 13 26.7774117548944 15.156996017763694 30.53916560682193 27.526426620519985 14 25.309353042970624 17.346183516460606 33.30145111857056 24.043012321998205 15 28.031764068135857 18.510883389279236 29.421376894689654 24.035975647895253 16 32.888372286971205 21.2114025394575 24.923378437545608 20.976846736025685 17 32.74920251026833 20.384984258699415 25.68255738798657 21.183255843045682 18 30.766945353710152 20.596084481788047 25.80009590726185 22.836874257239955 19 29.943393866105122 24.14152575943957 23.818359985822404 22.096720388632903 20 29.820903613201843 24.347413631340824 24.298417530179513 21.533265225277816 21 28.0679899088881 24.931718199445406 25.964545587223487 21.03574630444301 22 27.63223734962367 22.14936513562538 27.984592289890127 22.23380522486083 23 29.085440860663432 23.180628818047243 25.441225528011174 22.29270479327815 24 30.026530867543734 21.28202989804641 24.34663177866272 24.344807455747137 25 28.719533807309798 22.257260805204012 22.27524341680045 26.747961970685736 26 23.749296332589704 23.048235097887957 25.42220044617726 27.78026812334508 27 22.978128974417782 20.776953067989908 24.768832224839983 31.476085732752328 28 25.550163667827285 24.602558221962763 22.84573525425849 27.00154285595146 29 29.206888643329233 23.784219085545107 22.212695202551966 24.79619706857369 30 28.4216479369514 20.935669161645436 25.397441778037237 25.24524112336593 31 32.38277422179597 20.398536371786584 24.102954360653005 23.115735045764442 32 32.964211996747494 20.24138398348727 24.836853407835207 21.957550611930028 33 33.52193357379647 20.503304630652792 24.272616391802014 21.702145403748723 34 26.69948710464316 23.508485707733044 28.992661009528177 20.799366178095617 35 25.651022663302964 27.839428309321768 26.20196818380835 20.307580843566917 36 26.05445864520568 28.61893542939349 25.554594166336553 19.772011759064277 37 29.656453933240208 27.48941892708963 21.610929257969687 21.243197881700475 38 28.13601109188333 29.093780622563227 22.580426578821175 20.189781706732273 39 30.088818464232848 25.488918541375643 22.20227050017722 22.219992494214292 40 25.39092633905302 24.183485186497926 23.651304130267082 26.774284344181975 41 24.56633238121052 26.90276880095073 21.89057189917228 26.640326918666474 42 23.123553572545504 23.124856660342346 24.96820465775702 28.783385109355127 43 23.966390759543817 23.82982715843463 22.617694889810895 29.586087192210663 44 24.40813752267373 21.861382732522987 24.912171882492753 28.818307862310533 45 26.62938098117299 21.48974209286325 24.20641953172237 27.674457394241394 46 26.60331922523612 25.080791443404294 23.442810082772137 24.873079248587455 47 24.72322415195046 24.43758730688239 24.534797656526905 26.304390884640245 48 26.254873548360198 24.04457602735442 25.695848883514376 24.004701540771013 49 26.802431040593795 22.751912932885766 25.559806517523924 24.885849508996518 50 24.47094635448158 21.182213372808206 26.974959864895858 27.37188040781436 51 23.92964368367283 22.991420469945584 27.393251047682586 25.685684798699 52 22.331015574505347 23.198350812084314 27.966349060734313 26.504284552676022 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 6.5 6 2.0 7 2.0 8 2.0 9 41.5 10 81.0 11 200.0 12 319.0 13 371.5 14 429.5 15 435.0 16 594.0 17 753.0 18 718.0 19 683.0 20 826.5 21 970.0 22 883.0 23 796.0 24 989.0 25 1182.0 26 1286.5 27 1391.0 28 2101.0 29 2811.0 30 3762.5 31 4714.0 32 5671.0 33 6628.0 34 6424.0 35 6220.0 36 8205.5 37 10191.0 38 10188.0 39 10204.5 40 10224.0 41 11356.0 42 12488.0 43 13483.0 44 14478.0 45 15404.5 46 16331.0 47 19238.5 48 22146.0 49 21462.5 50 20779.0 51 21638.0 52 22497.0 53 22739.0 54 22981.0 55 29100.0 56 35219.0 57 34007.5 58 32796.0 59 33021.0 60 33246.0 61 34675.0 62 36104.0 63 27878.5 64 16558.0 65 13463.0 66 10205.5 67 6948.0 68 6298.0 69 5648.0 70 5155.5 71 4663.0 72 3690.5 73 2718.0 74 2217.5 75 1717.0 76 1449.0 77 1181.0 78 800.5 79 420.0 80 291.0 81 162.0 82 97.5 83 33.0 84 21.0 85 9.0 86 5.5 87 2.0 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 383704.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.574296853824823 #Duplication Level Percentage of deduplicated Percentage of total 1 67.29925568097796 7.116423076121177 2 9.599743678217578 2.0302107874820177 3 3.258244195790408 1.033609240456185 4 1.6094050377088776 0.6807330650709922 5 0.897126238477843 0.4743239580509977 6 0.6851678414748361 0.43471008902695824 7 0.5225020949376448 0.38675645810312115 8 0.5348252575540987 0.4524320830640285 9 0.4165228964361414 0.3963993077997623 >10 11.073593927145463 30.442476492296144 >50 2.548430029082664 18.303953047140503 >100 1.4960319416375019 29.94365448366449 >500 0.04189875289594321 2.936378041406918 >1k 0.014787795139744665 3.6814836436419736 >5k 0.002464632523290777 1.6864562266747283 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 6471 1.6864562266747283 No Hit ATCAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3992 1.0403852969997707 No Hit ATCAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3276 0.8537831244917958 No Hit ATCAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2104 0.5483393449117028 No Hit ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 2100 0.547296874674228 No Hit ATCAACGGGTACTTCATTATTCTCATCTAGCAAACTGGATCCTTCAAATGTA 1438 0.3747680503721619 No Hit ATCAACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1216 0.3169109521923149 No Hit ATCAACGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 848 0.22100369034464065 No Hit ATCAACGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 815 0.2124033108854742 No Hit ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 801 0.20875466505431273 No Hit ATCAACGGGTGTGTGTGTGTATGTGCCTGTGTATGTGTGCCTGTGTGTATGT 776 0.2022392260700957 No Hit ATCAACGGGGATCAGTGGTAGCTTAACAACCTCTGGATTGATTGTGTATAAT 754 0.19650563976398475 No Hit ATCAACGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 710 0.18503846715176284 No Hit ATCAACGGGGGGGGCTGGCGAGATAGCTCAGTGGTTAAGAGCACCGACTGCT 692 0.18034735108312658 No Hit ATCAACGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 684 0.17826241060817713 No Hit ATCAACGGGGGGGGGCTGGCGAGATAGCTCAGTGGTTAAGAGCACCGACTGC 662 0.17252882430206617 No Hit ATCAACGGGCGGGGAAGGTGACAGCATTGCTTCTGTGTAAATTATGTACTGC 632 0.16471029752100577 No Hit ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 627 0.16340720972416237 No Hit ATCAACGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCT 585 0.1524612722306778 No Hit ATCAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTGCT 584 0.15220065467130914 No Hit ATCAACGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 529 0.13786668890603174 No Hit ATCAACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 524 0.13656360110918833 No Hit ATCAACGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCC 524 0.13656360110918833 No Hit ATCAACGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 520 0.1355211308717136 No Hit ATCAACGGGACGGTAGAACACTGCAGCTGTCGCCAGGGTTACAGTGCGCATA 474 0.12353272314075434 No Hit ATCAACAGGCAGAACACTGTTGTGGGACTATCCTTGTTTGGTCTTTGATTGT 469 0.12222963534391093 No Hit ATCAACGGGGGTGGGCGGACCGCGCTGCTGGAGGTGTGAGGAGCTTAGACTC 469 0.12222963534391093 No Hit ATCAACGGGCAAGGGGCTCCCCCCTCTGCTCTGCACCAGCCCGCCCTGGGAC 463 0.12066592998769886 No Hit ATCAACGGGGCCTCGTCCGTGGTCGTTCCGCGCCGTCATGTCTGTCCTGACG 461 0.12014469486896148 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 448 0.11675666659716866 No Hit ATCAACGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 444 0.11571419635969392 No Hit ATCAACGGGGGGGCTGAAGAGATGGCTCAGAGGTTAAGAGCAGTGGCTACTC 442 0.11519296124095657 No Hit ATCAACGGGGGGCCTTTCAGGAATACCACGACGCTACTCAGACTACCCAGAT 438 0.11415049100348186 No Hit ATCAACGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 433 0.11284740320663844 No Hit ATCAACGGGGGGCTGGCGAGATAGCTCAGTGGTTAAGAGCACCGACTGCTCT 430 0.11206555052853241 No Hit ATCAACGGGACTTGACTGCAGAGGGAGCGCTGCTTGCTGAGTCAGAGGATGA 425 0.11076246273168901 No Hit ATCAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 420 0.10945937493484562 No Hit ATCAACGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAACA 414 0.10789566957863353 No Hit ATCAACGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 406 0.10581072910368408 No Hit ATCAACGGGACTGTCCCTCAGCACTGCTCCTCTCTTGCTGATCTTTTAGCTC 405 0.10555011154431541 No Hit ATCAACGGGGCCCCAGTCACTGAGCCGCCGCCGAGGACTCAGCTGCCTCCCC 404 0.10528949398494673 No Hit ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTGCTC 404 0.10528949398494673 No Hit ATCAACGGGAGCGAGGAACTGTACCACCGTTGTCGCCTCAGCAATCTGGAGG 403 0.10502887642557805 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGGCTGTTTG 400 0.104247023747472 No Hit ATCAACGGGGCACCTGGTCCTCCGTCTGAGGGGTGGCTATTAATTATTCGGT 395 0.10294393595062862 No Hit ATCAACGGGAAATCAATTCATAAAATTTCACGTCTATTTCATGATAGACGTG 394 0.10268331839125994 No Hit ATCAACGGGGGCCGTCATGTCTGTCCTGACGCCACTGCTGCTGAGGAGCCTG 394 0.10268331839125994 No Hit ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 389 0.10138023059441653 No Hit ATCAACGGGCCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 385 0.10033776035694181 No Hit ATCAACGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 385 0.10033776035694181 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 384 0.10007714279757314 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0026061755936868003 0.0 0.0 0.0 0.0 8 0.0033880282717928404 0.0 0.0 0.0 0.0 9 0.01589767112148948 0.0 0.0 0.0 0.0 10 0.019546316952651 0.0 0.0 0.0 0.0 11 0.02762546129308008 0.0 0.0 0.0 0.0 12 0.03361966515855972 0.0 0.0 0.0 0.0 13 0.04117757438025144 0.0 0.0 0.0 0.0 14 0.0495173362800492 0.0 0.0 0.0 0.0 15 0.05629339282363489 0.0 0.0 0.0 0.0 16 0.149855096636991 0.0 0.0 0.0 0.0 17 0.15871609365552614 0.0 0.0 0.0 0.0 18 0.16392844484289973 0.0 0.0 0.0 0.0 19 0.17695932281133372 0.0 0.0 0.0 0.0 20 0.1879052603048183 0.0 0.0 0.0 0.0 21 0.19650563976398475 0.0 0.0 0.0 0.0 22 0.2087546650543127 0.0 0.0 0.0 0.0 23 0.21865813231032255 0.0 0.0 0.0 0.0 24 0.2283009820069637 0.0 0.0 0.0 0.0 25 0.23403456831307465 0.0 0.0 0.0 0.0 26 0.24211371265350373 0.0 0.0 0.0 0.0 27 0.2567082959781498 0.0 0.0 0.0 0.0 28 0.2673936159122657 0.0 0.0 0.0 0.0 29 0.27599399537143215 0.0 0.0 0.0 0.0 30 0.28615808018681066 0.0 0.0 0.0 0.0 31 0.2968434001209265 0.0 0.0 0.0 0.0 32 0.3080499551737798 0.0 0.0 0.0 0.0 33 0.31508662927673414 0.0 0.0 0.0 0.0 34 0.32499009653274397 0.0 0.0 0.0 0.0 35 0.3369785042637033 0.0 0.0 0.0 0.0 36 0.3544398807414048 0.0 0.0 0.0 0.0 37 0.37216187477847507 0.0 0.0 0.0 0.0 38 0.38675645810312115 0.0 0.0 0.0 0.0 39 0.39509622000291894 0.0 0.0 0.0 0.0 40 0.4029147467839793 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 55 1.8189894E-12 46.000004 21 TTTACGT 55 1.8189894E-12 46.000004 22 TAATCAG 20 6.3061726E-4 46.0 24 TCGCCCC 30 1.8581395E-6 46.0 40 CTTCGAC 40 5.5952114E-9 46.0 18 CGGAATC 30 1.8581395E-6 46.0 19 TAATAAC 25 3.4128723E-5 46.0 42 AGCCGAA 20 6.3061726E-4 46.0 38 GATACCG 30 1.8581395E-6 46.0 42 CTCACCG 25 3.4128723E-5 46.0 37 ACACGTT 25 3.4128723E-5 46.0 29 ACACGGG 25 3.4128723E-5 46.0 46 ACACGCA 20 6.3061726E-4 46.0 41 TCACCGC 25 3.4128723E-5 46.0 38 CATATCG 25 3.4128723E-5 46.0 29 CGTATGG 20 6.3061726E-4 46.0 11 GATCGCG 20 6.3061726E-4 46.0 13 GGTCGGT 40 5.5952114E-9 46.0 39 AAATAGG 20 6.3061726E-4 46.0 46 ACGTTTC 25 3.4128723E-5 46.0 31 >>END_MODULE