##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527339_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 506201 Sequences flagged as poor quality 0 Sequence length 50 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.878516636671993 31.0 31.0 34.0 28.0 34.0 2 31.20053298985976 31.0 31.0 34.0 28.0 34.0 3 32.254416723791536 34.0 31.0 34.0 30.0 34.0 4 36.20856537225331 37.0 37.0 37.0 35.0 37.0 5 35.93197366263599 37.0 35.0 37.0 35.0 37.0 6 36.242757323671825 37.0 37.0 37.0 35.0 37.0 7 36.110926292125065 37.0 35.0 37.0 35.0 37.0 8 36.33532924668264 37.0 37.0 37.0 35.0 37.0 9 38.312691993891754 39.0 39.0 39.0 37.0 39.0 10 37.08343128520094 39.0 37.0 39.0 34.0 39.0 11 36.69132222180517 38.0 37.0 39.0 32.0 39.0 12 36.19346267589357 37.0 35.0 39.0 32.0 39.0 13 36.29615310914044 38.0 35.0 39.0 32.0 39.0 14 37.13226366601409 39.0 36.0 40.0 33.0 40.0 15 37.19985539341092 39.0 36.0 40.0 33.0 40.0 16 37.3322237609171 39.0 36.0 40.0 33.0 40.0 17 37.237378037577955 39.0 36.0 40.0 33.0 40.0 18 37.08831867183194 39.0 35.0 40.0 33.0 40.0 19 36.998470963115444 39.0 35.0 40.0 32.0 40.0 20 36.86090505550167 38.0 35.0 40.0 32.0 40.0 21 36.761217382028086 38.0 35.0 40.0 32.0 40.0 22 36.565858226277705 38.0 35.0 40.0 31.0 40.0 23 36.32498157846389 38.0 35.0 40.0 31.0 40.0 24 36.2211986937995 38.0 35.0 40.0 31.0 40.0 25 35.95818657015691 38.0 34.0 40.0 31.0 40.0 26 35.40223547563122 37.0 34.0 39.0 30.0 40.0 27 35.24528991448061 37.0 34.0 39.0 30.0 40.0 28 34.97546429185245 37.0 34.0 38.0 29.0 40.0 29 34.618234653823286 36.0 33.0 38.0 29.0 40.0 30 34.28680701934607 36.0 33.0 38.0 27.0 40.0 31 34.07429854939046 36.0 33.0 38.0 27.0 39.0 32 33.87978885857594 35.0 33.0 38.0 27.0 39.0 33 33.238168237518295 35.0 32.0 38.0 25.0 39.0 34 32.676292618939904 34.0 31.0 38.0 23.0 39.0 35 32.52701397271044 34.0 31.0 37.0 23.0 38.0 36 32.303577037579934 34.0 31.0 37.0 24.0 38.0 37 31.966884696000207 34.0 30.0 36.0 23.0 38.0 38 31.592246953285354 33.0 30.0 36.0 23.0 38.0 39 30.83292210011438 33.0 29.0 35.0 21.0 38.0 40 30.501340376648802 33.0 29.0 35.0 21.0 38.0 41 30.231145335548526 32.0 28.0 35.0 21.0 37.0 42 29.878645044162297 32.0 27.0 34.0 20.0 37.0 43 29.310250276076104 31.0 27.0 34.0 19.0 36.0 44 28.729781252901514 31.0 26.0 34.0 18.0 36.0 45 28.372602977868475 30.0 25.0 33.0 18.0 36.0 46 28.087103739423668 30.0 24.0 33.0 18.0 35.0 47 27.753827037086058 30.0 24.0 33.0 18.0 35.0 48 27.095776183768898 29.0 23.0 32.0 16.0 34.0 49 26.45081894346317 29.0 23.0 32.0 14.0 34.0 50 29.83508329695121 32.0 27.0 34.0 20.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 26.0 12 40.0 13 76.0 14 113.0 15 166.0 16 228.0 17 389.0 18 506.0 19 740.0 20 1023.0 21 1442.0 22 2142.0 23 2951.0 24 4013.0 25 5318.0 26 6596.0 27 8753.0 28 11446.0 29 14341.0 30 18652.0 31 25813.0 32 39994.0 33 59902.0 34 73595.0 35 107486.0 36 101681.0 37 18361.0 38 402.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 98.09146959409405 0.6258383527492043 0.41959616832048924 0.8630958848362607 8 98.16811898830701 0.8433408863277632 0.5916622053295035 0.39687792003571704 9 97.13473501632751 0.9855768755889459 0.5254829603260365 1.3542051477575114 10 67.95521936938094 21.133304754435493 3.887981256457415 7.023494619726156 11 40.61607938348601 26.689595634935532 14.527825903149145 18.166499078429318 12 35.40530342689959 13.456709884018403 26.345266010932416 24.79272067814959 13 25.20876094673855 16.20285222668466 27.998561836108582 30.589824990468212 14 26.19097947258105 17.216678750140755 29.415192779152942 27.17714899812525 15 27.4552993771249 16.51893220282062 28.301010863273678 27.724757556780805 16 32.103255426204214 17.404153685986394 24.904929069677856 25.587661818131537 17 33.41755547697456 18.15820197905575 22.673404438157966 25.750838105811724 18 31.856713044818164 19.236232247664464 21.5131933757539 27.393861331763468 19 31.660150809658617 19.59636587047438 21.37056228652255 27.37292103334446 20 32.08527837756148 20.951558768157312 20.322757165631835 26.64040568864937 21 33.421506476676264 20.188028075803878 22.656415139440657 23.7340503080792 22 32.609576037977014 17.040464163444955 24.314452164258864 26.03550763431917 23 31.428424677153938 19.43615283257046 21.21271984843965 27.92270264183595 24 33.40273922809319 18.998777165592323 21.596559469459763 26.001924136854726 25 29.21072854458999 18.274954020240973 21.333620439311655 31.180696995857378 26 29.226334993411708 18.53651020049348 23.540846422666096 28.696308383428715 27 30.11491482632393 16.226360674909767 21.732078759228056 31.926645739538245 28 30.58962744048313 22.351002862499282 18.988307016382823 28.071062680634768 29 32.61787313735058 19.889727598325564 19.99818254013722 27.494216724186636 30 29.972481287077663 19.653260266178847 21.611573268326218 28.762685178417268 31 35.86124879247571 18.180722677355437 19.529593975515656 26.42843455465319 32 36.99735875669941 18.60091149563118 19.15108820409284 25.250641543576563 33 35.84860559343028 18.51477970213413 21.205608048976593 24.431006655458997 34 31.62538201228366 20.890120722795885 24.220220821373328 23.26427644354713 35 31.30752408628193 24.47841865187939 22.009636488272445 22.20442077356623 36 31.62972811195553 25.248468493740628 20.007269839451126 23.114533554852716 37 32.63426978611263 25.130728702629984 19.458278430899977 22.776723080357407 38 34.40688580228012 23.032550311042453 20.103871782157682 22.456692104519746 39 34.88811756594713 21.32413804002758 18.088466834320755 25.69927755970454 40 30.967738111935773 20.87846527367587 20.81169337871715 27.342103235671207 41 29.493027473276424 21.3606847872683 21.207978648797614 27.938309090657665 42 26.983352462756887 19.588661421056063 22.370955410992867 31.057030705194183 43 28.27987301486959 18.08905948427601 24.348430761693475 29.282636739160928 44 27.94640864004615 16.65287109270823 23.66648821318014 31.73423205406548 45 29.46596312531978 18.35594951412581 24.01358353697444 28.164503823579963 46 28.944036064725275 20.575621146540605 22.9240953692308 27.556247419503322 47 28.63961153770933 19.40632278482263 23.539266022785416 28.414799654682625 48 31.21921924294895 18.710946837323515 23.66767351309065 26.402160406636888 49 29.350989034000328 19.04460876213204 24.104258980128446 27.500143223739187 50 28.442851752564692 20.028802787825388 22.923107619305373 28.605237840304543 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 16.0 10 32.0 11 18.5 12 5.0 13 5.5 14 6.0 15 13.0 16 20.0 17 48.0 18 76.0 19 115.0 20 154.0 21 164.0 22 174.0 23 258.5 24 343.0 25 449.0 26 555.0 27 582.0 28 609.0 29 745.0 30 881.0 31 1062.5 32 1244.0 33 1312.0 34 1380.0 35 1548.0 36 1716.0 37 1987.5 38 2259.0 39 2864.5 40 3470.0 41 4880.0 42 6290.0 43 6310.5 44 6331.0 45 6598.5 46 6866.0 47 6800.5 48 6735.0 49 7769.0 50 8803.0 51 10424.5 52 12046.0 53 13317.0 54 14588.0 55 16925.5 56 19263.0 57 20926.0 58 22589.0 59 27772.0 60 32955.0 61 40175.5 62 47396.0 63 48711.0 64 50026.0 65 55021.0 66 60016.0 67 57315.0 68 54614.0 69 49249.5 70 43885.0 71 38899.5 72 33914.0 73 27075.0 74 20236.0 75 18712.0 76 17188.0 77 13709.0 78 10230.0 79 11074.0 80 11918.0 81 8417.5 82 4917.0 83 3136.5 84 1356.0 85 1187.5 86 1019.0 87 546.0 88 73.0 89 45.0 90 17.0 91 10.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 506201.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.199892927908083 #Duplication Level Percentage of deduplicated Percentage of total 1 73.88286032276015 10.491287057907828 2 8.462715637173067 2.4033931185438195 3 2.949360044518642 1.256417905140448 4 1.3745130773511407 0.7807175410558256 5 0.7609905397885365 0.5402992092074097 6 0.5411797440178074 0.46108166518833427 7 0.422927100723428 0.42038636826082926 8 0.33110740122426263 0.37613517160179455 9 0.3283249860879243 0.41959616832048924 >10 8.146911519198664 30.714479031056836 >50 1.864218141346689 17.937341095730748 >100 0.862548692264886 23.061590158849942 >500 0.05425709515859766 4.96443112518545 >1k 0.01669449081803005 4.795920987907965 >5k 0.0013912075681691708 1.3769233960422835 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 6970 1.3769233960422835 No Hit GCCCTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2977 0.5881063055979739 No Hit GCCCTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2894 0.5717096568359209 No Hit GCCCTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2702 0.5337800596996055 No Hit GCCCTCCACCATATCACACATTCGAGGAACCAACCTATGTAAAAGTAAAA 2255 0.4454752163666212 No Hit GCCCTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1961 0.3873955207516382 No Hit GCCCTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1953 0.3858151208709584 No Hit GCCCTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1873 0.3700111220641603 No Hit GCCCTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1837 0.36289932260110114 No Hit GCCCTCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1748 0.3453173739285383 No Hit GCCCTCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 1428 0.2821013787013459 No Hit GCCCTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1342 0.26511207998403796 No Hit GCCCTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1307 0.2581978305060638 No Hit GCCCTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 991 0.19577203521921135 No Hit GCCCTCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 984 0.1943891853236165 No Hit GCCCTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 960 0.1896479856815771 No Hit GCCCTCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 882 0.17423908684494896 No Hit GCCCTCGGGGATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGAACGGT 826 0.16317628768019027 No Hit GCCCTCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 824 0.16278118771002034 No Hit GCCCTCGGGGCTCTATCTGCGGCGTGTGGCGGCGAGATGTCTCACAGGAA 799 0.15784243808289591 No Hit GCCCTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 769 0.15191593853034663 No Hit GCCCTCGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 736 0.1453967890225424 No Hit GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 703 0.13887763951473822 No Hit GCCCTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 658 0.12998789018591428 No Hit GCCCTCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 649 0.1282099403201495 No Hit GCCCTCGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTGG 641 0.1266295404394697 No Hit GCCCTCGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCGG 633 0.12504914055878988 No Hit GCCCTCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 631 0.12465404058861994 No Hit GCCCTCGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCT 628 0.124061390633365 No Hit GCCCTCGGGGCTCTTTCTAAGCCGGCGATCCGTCAGGGTGAAGCCATGTT 626 0.12366629066319507 No Hit GCCCTCGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 625 0.12346874067811008 No Hit GCCCTCGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCT 623 0.12307364070794014 No Hit GCCCTCGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 617 0.12188834079743026 No Hit GCCCTCGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGC 598 0.11813489108081572 No Hit GCCCTCGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAA 581 0.11477654133437112 No Hit GCCCTCGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAA 578 0.11418389137911619 No Hit GCCCTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 577 0.11398634139403122 No Hit GCCCTCGGGGGCTGTTGAGCTGGGAGGCGCGGTTGGAAGTCGTTACTTTG 566 0.1118132915580965 No Hit GCCCTCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 558 0.11023289167741669 No Hit GCCCTCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 558 0.11023289167741669 No Hit GCCCTCGGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGA 548 0.1082573918265669 No Hit GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 545 0.107664741871312 No Hit GCCCTCGGGGGGGTTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 540 0.1066769919458871 No Hit GCCCTCGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGAA 538 0.10628189197571716 No Hit GCCCTCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 537 0.10608434199063219 No Hit GCCCTCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 530 0.10470149209503735 No Hit GCCCTCGGGGACTGTTTGCTGCTTTAGGTGTCTCTTTTCCTCCCTCTCTA 524 0.1035161921845275 No Hit GCCCTCGGGGGGGCGGACCGCGCTGCTGGAGGTGTGAGGAGCTTAGACTC 514 0.10154069233367773 No Hit GCCCTCGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTG 512 0.10114559236350779 No Hit GCCCTCATTGCTCTTTGCCTGTCTCTGCTTTATGCCTGGAAAGCTTTCCA 508 0.10035539242316788 No Hit GCCCTCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC 508 0.10035539242316788 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.9754998508497612E-4 0.0 0.0 0.0 0.0 9 5.926499552549283E-4 0.0 0.0 0.0 0.0 10 0.009087299313908902 0.0 0.0 0.0 0.0 11 0.029830047747831396 0.0 0.0 0.0 0.0 12 0.041683046852929964 0.0 0.0 0.0 0.0 13 0.05610419576413322 0.0 0.0 0.0 0.0 14 0.07763714413839562 0.0 0.0 0.0 0.0 15 0.09067544315400404 0.0 0.0 0.0 0.0 16 0.10371374216961246 0.0 0.0 0.0 0.0 17 0.11556674127471103 0.0 0.0 0.0 0.0 18 0.12445649060353496 0.0 0.0 0.0 0.0 19 0.13670458967880347 0.0 0.0 0.0 0.0 20 0.14539678902254244 0.0 0.0 0.0 0.0 21 0.1546816383215363 0.0 0.0 0.0 0.0 22 0.16179343778459546 0.0 0.0 0.0 0.0 23 0.17186848702392923 0.0 0.0 0.0 0.0 24 0.18490678603953764 0.0 0.0 0.0 0.0 25 0.19320388541310665 0.0 0.0 0.0 0.0 26 0.20426668457786532 0.0 0.0 0.0 0.0 27 0.21631723366804886 0.0 0.0 0.0 0.0 28 0.3121289764342623 0.0 0.0 0.0 0.0 29 0.3257599254051256 0.0 0.0 0.0 0.0 30 0.35815812295906174 0.0 0.0 0.0 0.0 31 0.36902337213873543 0.0 0.0 0.0 0.0 32 0.38087637124383394 0.0 0.0 0.0 0.0 33 0.38956857058757294 0.0 0.0 0.0 0.0 34 0.4016191196777565 0.0 0.0 0.0 0.0 35 0.45298211579985026 0.0 0.0 0.0 0.0 36 0.4695763145469882 0.0 0.0 0.0 0.0 37 0.4816268636371718 0.0 0.0 0.0 0.0 38 0.48952886304057086 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACA 20 7.852301E-4 44.000004 24 TAATACG 20 7.852301E-4 44.000004 30 TGATAAT 40 8.296411E-9 44.000004 28 ACCGGAC 20 7.852301E-4 44.000004 41 CTCGTTT 20 7.852301E-4 44.000004 39 AACCCTC 20 7.852301E-4 44.000004 43 CGTTGTA 20 7.852301E-4 44.000004 27 TCTTAAC 20 7.852301E-4 44.000004 23 ACCGAAC 40 8.296411E-9 44.000004 14 GCACGAC 40 8.296411E-9 44.000004 12 TACATTA 20 7.852301E-4 44.000004 18 TATGAGG 20 7.852301E-4 44.000004 27 CTAACGT 20 7.852301E-4 44.000004 36 TCTACTT 20 7.852301E-4 44.000004 12 AATCTTG 20 7.852301E-4 44.000004 36 GATATAG 20 7.852301E-4 44.000004 30 ATAAGGA 20 7.852301E-4 44.000004 16 ACTAAAG 20 7.852301E-4 44.000004 20 CATGTTA 20 7.852301E-4 44.000004 29 TAGATAT 20 7.852301E-4 44.000004 20 >>END_MODULE