##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527332_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1027970 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.892718659104837 33.0 31.0 33.0 31.0 34.0 2 32.34681362296565 33.0 31.0 34.0 31.0 34.0 3 32.341235639172346 33.0 31.0 34.0 31.0 34.0 4 35.67822115431384 37.0 35.0 37.0 35.0 37.0 5 36.081450820549236 37.0 35.0 37.0 35.0 37.0 6 36.3569073027423 37.0 37.0 37.0 35.0 37.0 7 36.61675437999163 37.0 37.0 37.0 35.0 37.0 8 36.653678609297934 37.0 37.0 37.0 35.0 37.0 9 38.43986400381334 39.0 39.0 39.0 38.0 39.0 10 35.11275912721188 35.0 35.0 37.0 33.0 39.0 11 34.84402073990486 35.0 34.0 39.0 27.0 39.0 12 35.20325690438437 35.0 34.0 39.0 31.0 39.0 13 35.55115908051791 35.0 35.0 39.0 32.0 39.0 14 36.205468058406375 36.0 35.0 40.0 33.0 40.0 15 36.31396441530395 36.0 35.0 40.0 33.0 40.0 16 36.50251661040692 36.0 35.0 40.0 33.0 40.0 17 36.279135577886514 36.0 35.0 40.0 32.0 40.0 18 36.195699290835336 36.0 35.0 40.0 32.0 40.0 19 35.9893956049301 36.0 35.0 40.0 31.0 40.0 20 35.90839713221203 36.0 35.0 40.0 31.0 40.0 21 35.89320991857739 36.0 35.0 40.0 31.0 40.0 22 36.01230969775383 35.0 35.0 40.0 32.0 40.0 23 35.995437610046984 35.0 35.0 40.0 32.0 40.0 24 36.05270970942732 35.0 35.0 40.0 32.0 40.0 25 36.07898479527613 35.0 35.0 40.0 32.0 40.0 26 36.03192505617868 35.0 35.0 40.0 32.0 40.0 27 36.025773125674874 35.0 35.0 40.0 32.0 40.0 28 35.90943412745508 35.0 35.0 40.0 32.0 40.0 29 35.9105431092347 35.0 35.0 40.0 32.0 40.0 30 35.75735770499139 35.0 34.0 40.0 31.0 40.0 31 35.73691255581389 35.0 34.0 40.0 31.0 40.0 32 35.7125888887808 35.0 34.0 40.0 31.0 40.0 33 35.63192019222351 35.0 34.0 40.0 31.0 40.0 34 35.10116443086861 35.0 34.0 40.0 29.0 40.0 35 35.11324260435616 35.0 34.0 40.0 30.0 40.0 36 35.23676760994971 35.0 34.0 40.0 30.0 40.0 37 35.297878342753194 35.0 34.0 40.0 31.0 40.0 38 35.37451968442659 35.0 34.0 40.0 31.0 40.0 39 35.39198322908256 35.0 34.0 40.0 31.0 40.0 40 35.31264725624288 35.0 34.0 40.0 31.0 40.0 41 35.27283286477232 35.0 34.0 40.0 31.0 40.0 42 35.17912974114031 35.0 34.0 40.0 30.0 40.0 43 35.21390312946876 35.0 34.0 40.0 31.0 40.0 44 35.217928538770586 35.0 34.0 40.0 31.0 40.0 45 35.05908635466015 35.0 34.0 40.0 30.0 40.0 46 34.81599560298452 35.0 34.0 39.0 29.0 40.0 47 34.78843351459673 35.0 34.0 39.0 29.0 40.0 48 34.695580610329095 35.0 34.0 39.0 29.0 40.0 49 34.62268256855745 35.0 34.0 39.0 29.0 40.0 50 35.00520929599113 35.0 34.0 39.0 31.0 40.0 51 35.12934132319037 35.0 34.0 39.0 31.0 40.0 52 34.80104185919823 35.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 9.0 12 10.0 13 14.0 14 42.0 15 71.0 16 136.0 17 259.0 18 460.0 19 685.0 20 1097.0 21 1510.0 22 2094.0 23 3004.0 24 4106.0 25 5577.0 26 7492.0 27 9592.0 28 11977.0 29 15349.0 30 20194.0 31 28916.0 32 45464.0 33 91260.0 34 231637.0 35 76855.0 36 49624.0 37 98917.0 38 262724.0 39 58895.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.32926058153448 0.553809936087629 0.09776549899316127 0.019163983384729126 8 99.23499713026645 0.573946710507116 0.11887506444740606 0.07218109477903051 9 94.49497553430548 2.9293656429662347 1.913577244472115 0.6620815782561748 10 49.43510024611613 40.33833672188877 3.7602264657528917 6.466336566242205 11 39.783553994766386 20.354193215755323 25.416792318841992 14.445460470636304 12 33.85721373191824 17.279687150403223 23.598354037569187 25.264745080109343 13 26.278685175637424 17.122192281875932 28.36814303919375 28.230979503292897 14 26.792999795713886 18.093815967392043 29.896203196591344 25.216981040302734 15 29.42615056859636 21.37027345155987 26.750002431977588 22.45357354786618 16 35.21600824926798 23.77297002830822 22.27068883333171 18.740332889092095 17 30.84165880327247 23.421014231932837 24.46472173312451 21.272605231670187 18 31.39721976322266 23.151842952615347 23.62880239695711 21.822134887204882 19 29.18742764866679 26.841347510141343 22.691323676760994 21.27990116443087 20 31.16219344922517 24.870375594618523 22.997558294502756 20.96987266165355 21 29.099584618228157 26.095314065585573 25.230794672996293 19.574306643189978 22 27.893518293335408 20.35798710079088 29.190540579978013 22.557954025895697 23 28.32183818593928 22.097629308248294 27.79088883916846 21.78964366664397 24 30.779692014358396 22.288880025681685 24.523575590727358 22.407852369232565 25 26.716830257692347 23.636973841649077 24.019183439205424 25.627012461453152 26 24.471044874850435 25.792386937361982 26.36185880910922 23.374709378678364 27 23.432882282556882 22.86399408543051 25.6573635417376 28.045760090275007 28 23.11536328881193 27.239024485150342 24.02365827796531 25.621953948072413 29 29.23665087502554 24.398669221864452 22.90271116861387 23.461968734496143 30 27.09446773738533 21.762794634084653 26.374213255250638 24.768524373279377 31 29.06252127980389 22.00083660028989 25.117659075653958 23.818983044252263 32 30.956253587166945 22.839577030458088 24.340690876192888 21.863478506182087 33 31.215696956136853 22.199383250483965 25.213770829888034 21.37114896349115 34 26.56400478613189 23.953617323462748 28.920007393211865 20.5623704971935 35 23.950017996634145 28.839557574637393 26.44153039485588 20.768894033872584 36 24.947809760985244 29.93063999922177 23.880755274959387 21.240794964833604 37 29.684912983841944 27.07374728834499 21.819702909617984 21.421636818195083 38 27.205852310865104 29.341420469468954 21.86338122707861 21.589345992587333 39 29.42021654328434 24.27580571417454 23.384340009922468 22.919637732618657 40 26.733562263490178 23.207583878906973 22.67050594861718 27.388347908985672 41 23.44027549442104 27.544578149167776 23.290076558654434 25.725069797756746 42 23.039874704514723 24.14914832144907 23.305349377900132 29.505627596136076 43 22.57244861231359 23.272079924511416 25.903868789945232 28.251602673229765 44 24.963763533955273 22.436744262964872 23.89700088523984 28.70249131784001 45 26.36127513448836 23.66430926972577 23.86937361985272 26.10504197593315 46 24.844012957576584 26.957887876105335 22.492290631049546 25.705808535268538 47 23.72199577808691 24.646730935727696 25.33284045254239 26.298432833643005 48 25.900269463116626 22.742297926982307 27.504012763018377 23.85341984688269 49 27.59866533070031 22.58392754652373 25.338190803233555 24.4792163195424 50 24.27016352617294 22.507758008502194 25.512320398455206 27.709758066869654 51 23.04065293734253 23.409535297722698 27.45216300086578 26.097648764068992 52 22.70153798262595 23.42451627965797 27.548761150617235 26.325184587098843 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 20.0 6 38.0 7 46.5 8 55.0 9 267.0 10 479.0 11 887.0 12 1295.0 13 1630.0 14 1732.0 15 1499.0 16 1382.0 17 1265.0 18 1487.5 19 1710.0 20 1994.5 21 2279.0 22 2701.5 23 3124.0 24 4070.5 25 5017.0 26 6313.5 27 7610.0 28 7538.0 29 7466.0 30 10238.0 31 13010.0 32 14440.0 33 15870.0 34 17558.0 35 19246.0 36 22293.5 37 25341.0 38 26990.5 39 32936.5 40 37233.0 41 38246.0 42 39259.0 43 40102.5 44 40946.0 45 43492.5 46 46039.0 47 50569.5 48 55100.0 49 55429.5 50 55759.0 51 62287.0 52 68815.0 53 69674.5 54 70534.0 55 74020.0 56 77506.0 57 82895.0 58 88284.0 59 88176.5 60 88069.0 61 86585.0 62 85101.0 63 69438.0 64 44589.0 65 35403.0 66 26875.0 67 18347.0 68 14537.5 69 10728.0 70 10242.0 71 9756.0 72 7634.0 73 5512.0 74 4514.5 75 3517.0 76 2309.0 77 1101.0 78 953.5 79 806.0 80 572.0 81 338.0 82 215.0 83 92.0 84 59.0 85 26.0 86 16.0 87 6.0 88 5.5 89 2.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1027970.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.746664887682918 #Duplication Level Percentage of deduplicated Percentage of total 1 67.07504792618299 6.537580144617768 2 9.602612918750319 1.8718690033038825 3 3.398918848175883 0.9938436898079865 4 1.470957324397859 0.573477124199545 5 0.8879741588352381 0.43273932775445956 6 0.5829830335589326 0.3409284157982232 7 0.48598585643574366 0.3315718897982942 8 0.4069881554922955 0.3173421731871674 9 0.3909886211240448 0.3429751558493959 >10 10.708688346847559 27.712860418930724 >50 3.041911471763029 20.238263181861665 >100 1.8909449681472346 33.908537509635536 >500 0.04399871951268023 2.8592958644938125 >1k 0.0099997089801546 1.7565902909558573 >5k 9.9997089801546E-4 0.48741652583200584 >10k+ 9.9997089801546E-4 1.2947092839736785 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 13284 1.292255610572293 No Hit TTTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5001 0.4864927964823876 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 3540 0.3443680263042696 No Hit TTTAGGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2561 0.24913178400147862 No Hit TTTAGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 2193 0.21333307392239076 No Hit TTTAGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 1926 0.18735955329435686 No Hit TTTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1809 0.1759778981876903 No Hit TTTAGGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1341 0.13045127776102414 No Hit TTTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1264 0.12296078679338893 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 1223 0.11897234355088185 No Hit TTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTT 1151 0.11196824810062551 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0012646283451851709 0.0 0.0 0.0 0.0 8 0.0037938850355555124 0.0 0.0 0.0 0.0 9 0.009241514830199325 0.0 0.0 0.0 0.0 10 0.027335428076694847 0.0 0.0 0.0 0.0 11 0.0419272935980622 0.0 0.0 0.0 0.0 12 0.05087697111783418 0.0 0.0 0.0 0.0 13 0.06041032325846085 0.0 0.0 0.0 0.0 14 0.07023551270951486 0.0 0.0 0.0 0.0 15 0.0816171678161814 0.0 0.0 0.0 0.0 16 0.0937770557506542 0.0 0.0 0.0 0.0 17 0.10350496609823244 0.0 0.0 0.0 0.0 18 0.11430294658404429 0.0 0.0 0.0 0.0 19 0.12714378824284756 0.0 0.0 0.0 0.0 20 0.13940095528079613 0.0 0.0 0.0 0.0 21 0.1495179820422775 0.0 0.0 0.0 0.0 22 0.15564656556125178 0.0 0.0 0.0 0.0 23 0.16508263859840266 0.0 0.0 0.0 0.0 24 0.17189217584170743 0.0 0.0 0.0 0.0 25 0.1797717832232458 0.0 0.0 0.0 0.0 26 0.1876513906047842 0.0 0.0 0.0 0.0 27 0.19514188157241943 0.0 0.0 0.0 0.0 28 0.20224325612615154 0.0 0.0 0.0 0.0 29 0.21002558440421412 0.0 0.0 0.0 0.0 30 0.21702967985447047 0.0 0.0 0.0 0.0 31 0.22422833351167837 0.0 0.0 0.0 0.0 32 0.2312324289619347 0.0 0.0 0.0 0.0 33 0.2384310826191426 0.0 0.0 0.0 0.0 34 0.2466025273111083 0.0 0.0 0.0 0.0 35 0.256135879451735 0.0 0.0 0.0 0.0 36 0.27345155987042424 0.0 0.0 0.0 0.0 37 0.28444409856318764 0.0 0.0 0.0 0.0 38 0.29514479994552373 0.0 0.0 0.0 0.0 39 0.30253801180968315 0.0 0.0 0.0 0.0 40 0.3106121773981731 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 55 1.8189894E-12 46.000004 28 AATCCGT 35 1.0194344E-7 46.000004 30 CGCGACA 35 1.0194344E-7 46.000004 25 CGATGCG 35 1.0194344E-7 46.000004 21 TCACGCG 20 6.3111435E-4 46.0 39 CTCGTCA 20 6.3111435E-4 46.0 39 CGGCATA 30 1.86121E-6 46.0 37 CGGTTAG 40 5.6097633E-9 46.0 29 CGGTTAC 25 3.4169017E-5 46.0 29 CGCATAG 40 5.6097633E-9 46.0 23 TTCACGC 20 6.3111435E-4 46.0 42 CACGCGC 20 6.3111435E-4 46.0 40 ATTCGTC 20 6.3111435E-4 46.0 14 ATTCGAA 65 0.0 46.0 10 GCGTTAG 20 6.3111435E-4 46.0 16 ACGATAT 30 1.86121E-6 46.0 33 TACGCCT 25 3.4169017E-5 46.0 26 CGTAGTG 20 6.3111435E-4 46.0 26 TATTCGA 30 1.86121E-6 46.0 18 CATACCG 25 3.4169017E-5 46.0 31 >>END_MODULE