##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527320_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1020224 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15242436955022 33.0 31.0 34.0 31.0 34.0 2 32.74928937174581 34.0 31.0 34.0 31.0 34.0 3 32.94638334326579 34.0 31.0 34.0 31.0 34.0 4 35.57785447117496 35.0 35.0 37.0 35.0 37.0 5 36.06726660027602 37.0 35.0 37.0 35.0 37.0 6 36.13728945800138 37.0 35.0 37.0 35.0 37.0 7 36.60120032463459 37.0 37.0 37.0 35.0 37.0 8 36.642028613324136 37.0 37.0 37.0 35.0 37.0 9 38.636971880685024 39.0 39.0 39.0 38.0 39.0 10 38.02762040493068 39.0 38.0 39.0 35.0 39.0 11 36.99129504893043 39.0 35.0 39.0 34.0 39.0 12 36.71638189260398 39.0 35.0 39.0 33.0 39.0 13 36.71025480678753 39.0 35.0 39.0 33.0 39.0 14 37.54368256382912 40.0 36.0 40.0 33.0 40.0 15 37.48047095539803 40.0 36.0 40.0 33.0 40.0 16 32.497240802019945 39.0 33.0 40.0 3.0 40.0 17 34.0964876340882 39.0 34.0 40.0 17.0 40.0 18 36.1586073254501 39.0 34.0 40.0 30.0 40.0 19 37.04654370020701 39.0 35.0 40.0 32.0 40.0 20 37.296351585534154 39.0 35.0 40.0 33.0 40.0 21 37.50639957499529 40.0 35.0 40.0 33.0 40.0 22 37.56862806599335 40.0 35.0 40.0 33.0 40.0 23 37.522943980929675 40.0 35.0 40.0 33.0 40.0 24 37.42074289567781 40.0 35.0 40.0 33.0 40.0 25 37.38248267047236 40.0 35.0 40.0 33.0 40.0 26 37.27929944796437 40.0 35.0 40.0 33.0 40.0 27 37.154844426322065 39.0 35.0 40.0 33.0 40.0 28 37.04720826014679 39.0 35.0 40.0 33.0 40.0 29 36.840467387554106 39.0 35.0 40.0 32.0 40.0 30 36.82852589235305 39.0 35.0 40.0 32.0 40.0 31 36.794644117370304 39.0 35.0 40.0 32.0 40.0 32 36.65400637507057 39.0 35.0 40.0 32.0 40.0 33 36.371834028605484 38.0 35.0 40.0 31.0 40.0 34 36.26219928172637 38.0 35.0 40.0 31.0 40.0 35 36.153843665704784 38.0 35.0 40.0 31.0 40.0 36 36.06827422213161 38.0 35.0 40.0 31.0 40.0 37 35.764213545260645 38.0 35.0 40.0 30.0 40.0 38 35.72887522740104 38.0 34.0 40.0 30.0 40.0 39 35.297319020136754 37.0 34.0 40.0 29.0 40.0 40 35.26135044852895 37.0 34.0 40.0 29.0 40.0 41 35.19843093281475 37.0 34.0 40.0 29.0 40.0 42 35.13549671444702 36.0 34.0 40.0 29.0 40.0 43 35.025403244777614 36.0 34.0 40.0 29.0 40.0 44 35.37577139922213 36.0 34.0 40.0 30.0 40.0 45 35.416094896806975 36.0 34.0 40.0 30.0 40.0 46 35.31340176275014 36.0 34.0 40.0 30.0 40.0 47 35.01766768866445 36.0 34.0 40.0 29.0 40.0 48 34.92127807226648 35.0 34.0 40.0 29.0 40.0 49 34.88884793927608 35.0 34.0 40.0 29.0 40.0 50 34.42259837055392 35.0 34.0 39.0 27.0 40.0 51 34.46704449218995 35.0 34.0 39.0 28.0 40.0 52 34.1179231227652 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 14.0 16 38.0 17 83.0 18 241.0 19 348.0 20 598.0 21 1043.0 22 1580.0 23 2408.0 24 3512.0 25 4947.0 26 6782.0 27 9128.0 28 11759.0 29 15050.0 30 20414.0 31 27588.0 32 39449.0 33 60885.0 34 97126.0 35 95689.0 36 122613.0 37 184178.0 38 231172.0 39 83577.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.47305689730884 0.44941110971708176 0.05949673797126905 0.01803525500282291 8 99.25575167806285 0.5873219998745374 0.07635578069129915 0.08057054137130669 9 94.59932328586663 2.440248416034126 1.8448889655605043 1.1155393325387366 10 52.470829935386746 32.68684132112163 6.149629885201681 8.692698858289944 11 33.212314158459314 22.73422307258014 24.857482278401605 19.195980490558938 12 29.98959052129728 17.116633209961734 27.855451351859983 25.038324916881 13 24.24938052819773 17.50066652029358 30.372741672417035 27.87721127909165 14 24.58479706417414 18.88340207640675 30.93261871902641 25.599182140392696 15 24.883947054764445 18.625811586475127 28.43846057336428 28.051780785396147 16 27.68313625243084 27.49670660560818 22.774214290195093 22.045942851765886 17 31.25254845994605 20.063535066808857 22.98995122639734 25.69396524684775 18 29.298565805156514 18.99563233172323 25.24053541183113 26.465266451289125 19 28.407290947870273 19.89582679882065 23.7150860987391 27.981796154569977 20 27.28508641239571 22.55710510632959 24.62008343265793 25.53772504861677 21 30.053890126089954 18.230800294837213 27.465929050875104 24.24938052819773 22 30.608670252807222 18.641886487673297 24.795143027413587 25.954300232105894 23 28.928156953767015 20.351315005332165 24.06696960667461 26.65355843422621 24 27.508762781506807 20.272802835455746 26.650029797377833 25.56840458565962 25 27.79134778244778 21.983015494636472 24.170280252179914 26.05535647073584 26 27.80526629446082 21.03283200552036 24.389153754469607 26.772747945549213 27 29.144187943039963 18.909768835079355 24.304466470108522 27.641576751772163 28 29.758954896179663 20.77690781632269 23.44494934445769 26.019187943039963 29 30.01605529766012 20.31426431842419 23.67421272191205 25.99546766200364 30 28.632241546954397 19.55972413901261 24.09304231227652 27.714992001756478 31 31.200010977981307 21.550267392258952 21.705331378207138 25.544390251552603 32 30.097998086694687 21.16123517972524 22.849785929364533 25.890980804215545 33 32.537952449658114 20.030307069819962 23.038175929991844 24.39356455053008 34 28.686347311962862 22.53269870146164 26.019383978420425 22.761570008155072 35 29.029507245467663 23.89730098488175 24.387585471425883 22.6856062982247 36 28.885323223135313 22.68737061664889 24.00551251489869 24.42179364531711 37 29.776598080421557 23.6393184241892 22.059175239947308 24.524908255441943 38 30.413615049244086 22.181893388118688 23.08424424440123 24.320247318235996 39 30.052223825356002 22.973778307508937 23.39192177404178 23.58207609309328 40 28.861308889028294 23.51493397528386 22.401453014240012 25.22230412144784 41 26.72070055203563 22.456146885389874 24.737998714007905 26.085153848566588 42 27.22735399284863 20.907467379712692 24.37886189699517 27.486316730443512 43 26.102208926667085 20.900312088325702 26.639835957593625 26.357643027413584 44 26.69472586412396 20.76573379963616 24.806219026409888 27.73332130983 45 26.8616499905903 21.274445611944042 25.479698575998995 26.38420582146666 46 27.648928078539615 21.615253120883256 24.763875384229344 25.97194341634778 47 26.23404272003011 21.679356690295464 25.831484066244276 26.25511652343015 48 27.510135029170062 22.869977573552475 25.193584938209646 24.426302459067813 49 26.598668527695878 22.42193871149865 25.03342403236936 25.945968728436107 50 25.5548781444075 23.673624615770656 24.827684900570855 25.94381233925099 51 26.55936343391255 22.606800075277587 24.32867683959601 26.50515965121385 52 26.531428392196222 22.619640392698074 25.39853992848629 25.45039128661941 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 36.5 10 73.0 11 408.5 12 744.0 13 1077.0 14 1842.0 15 2274.0 16 2348.5 17 2423.0 18 2404.5 19 2386.0 20 2745.5 21 3105.0 22 3278.0 23 3451.0 24 3606.5 25 3762.0 26 4974.0 27 6186.0 28 5705.0 29 5224.0 30 5910.5 31 6597.0 32 9665.5 33 12734.0 34 13377.5 35 14021.0 36 14054.0 37 14087.0 38 14794.0 39 19572.5 40 23644.0 41 22570.0 42 21496.0 43 25595.5 44 29695.0 45 31523.5 46 33352.0 47 33226.0 48 33100.0 49 35272.0 50 37444.0 51 41571.0 52 45698.0 53 50043.5 54 54389.0 55 61779.0 56 69169.0 57 75931.0 58 82693.0 59 88910.5 60 95128.0 61 89250.5 62 83373.0 63 84425.0 64 75510.5 65 65544.0 66 57109.5 67 48675.0 68 42424.0 69 36173.0 70 32124.0 71 28075.0 72 24817.5 73 21560.0 74 20534.5 75 19509.0 76 13755.5 77 8002.0 78 5403.0 79 2804.0 80 1756.0 81 708.0 82 495.0 83 282.0 84 251.0 85 220.0 86 120.0 87 20.0 88 12.0 89 5.0 90 6.0 91 5.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1020224.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.42516009516678 #Duplication Level Percentage of deduplicated Percentage of total 1 70.08561559092881 8.708249940856073 2 10.163107648761697 2.525564792005562 3 4.150049327090207 1.5469508187580492 4 2.2150464654541073 1.1008922780600239 5 1.4617049738133703 0.9080959155766344 6 1.0193752567055652 0.7599540456971027 7 0.7604969720652941 0.66145076408606 8 0.585682736962872 0.5821761417391311 9 0.44922530747111816 0.5023526727716248 >10 4.972552418436108 14.359402528104068 >50 2.226956018659519 20.091145135501336 >100 1.832790388699719 39.440417311204804 >500 0.05984296001413971 5.026851069569803 >1k 0.017553934937480982 3.786496586069728 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACGTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3222 0.3158129979298664 No Hit ACGTTGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3174 0.3111081487986952 No Hit ACGTTGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2937 0.2878779562135374 No Hit ACGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2488 0.2438680132990402 No Hit ACGTTGGGGGTGGGGTCCCTTGGCACGGTACTGTCTGCAGCCCCTTGTCTCT 2309 0.22632284674738096 No Hit ACGTTGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2285 0.22397042218179536 No Hit ACGTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2044 0.20034815883570667 No Hit ACGTTGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1889 0.18515541684963302 No Hit ACGTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1695 0.1661399849444828 No Hit ACGTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1625 0.15927874662819147 No Hit ACGTTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1399 0.13712674863559376 No Hit ACGTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1366 0.13389216485791355 No Hit ACGTTGGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 1327 0.13006947493883694 No Hit ACGTTGGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 1288 0.12624678501976036 No Hit ACGTTGGGGTGGTTCACTTTTTATAGAAATTAATGTAGTGAAACACTAAAGA 1241 0.1216399535788219 No Hit ACGTTGGGGACTATCCATCTATCTATCTATCCATCATCTATCTACCTACCTA 1218 0.11938554670346904 No Hit ACGTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1218 0.11938554670346904 No Hit ACGTTGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCCG 1170 0.11468069757229786 No Hit ACGTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1102 0.10801549463647199 No Hit ACGTTGGGGGAGACGTGCCGTGGTCTCAGCAATGCACCTGTTTTATACATGA 1095 0.10732937080484287 No Hit ACGTTGGGGATGCTAAAGAAACAGCCCTTCACCGGAAGGTTCTCACCACATC 1065 0.10438884009786085 No Hit ACGTTGGGGGTCATCACACATTGTTAGAATCCGAGTCCTACTGGGAAGGTGC 1036 0.10154632708111161 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0016663007339564645 0.0 0.0 0.0 0.0 8 0.0016663007339564645 0.0 0.0 0.0 0.0 9 0.0036266545386111283 0.0 0.0 0.0 0.0 10 0.009997804403738786 0.0 0.0 0.0 0.0 11 0.01656498964933191 0.0 0.0 0.0 0.0 12 0.021367856470735837 0.0 0.0 0.0 0.0 13 0.0259746879116743 0.0 0.0 0.0 0.0 14 0.038226899190765946 0.0 0.0 0.0 0.0 15 0.04557822595822094 0.0 0.0 0.0 0.0 16 0.05783043723731259 0.0 0.0 0.0 0.0 17 0.06547581707546578 0.0 0.0 0.0 0.0 18 0.07312119691361897 0.0 0.0 0.0 0.0 19 0.08155071827363403 0.0 0.0 0.0 0.0 20 0.08831393889969262 0.0 0.0 0.0 0.0 21 0.09458707107458754 0.0 0.0 0.0 0.0 22 0.100664167869017 0.0 0.0 0.0 0.0 23 0.10899567153879933 0.0 0.0 0.0 0.0 24 0.11605294523555611 0.0 0.0 0.0 0.0 25 0.12154193588858918 0.0 0.0 0.0 0.0 26 0.1263448027099931 0.0 0.0 0.0 0.0 27 0.13232388181418983 0.0 0.0 0.0 0.0 28 0.14192961545699767 0.0 0.0 0.0 0.0 29 0.14898688915375446 0.0 0.0 0.0 0.0 30 0.15584812747004578 0.0 0.0 0.0 0.0 31 0.1637875603788972 0.0 0.0 0.0 0.0 32 0.1703547456244903 0.0 0.0 0.0 0.0 33 0.17662787779938524 0.0 0.0 0.0 0.0 34 0.18544946992033123 0.0 0.0 0.0 0.0 35 0.19740762812872467 0.0 0.0 0.0 0.0 36 0.20887569788595445 0.0 0.0 0.0 0.0 37 0.21720720155573678 0.0 0.0 0.0 0.0 38 0.2240684398720281 0.0 0.0 0.0 0.0 39 0.23043958973715575 0.0 0.0 0.0 0.0 40 0.23837902264600716 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGATA 35 1.0194162E-7 46.000004 30 TCTACTA 35 1.0194162E-7 46.000004 13 ATATACG 35 1.0194162E-7 46.000004 10 AGCGATT 35 1.0194162E-7 46.000004 11 ACCACGA 35 1.0194162E-7 46.000004 18 AACGTTA 25 3.4168843E-5 46.0 44 AGCGTAT 20 6.311119E-4 46.0 23 TCGTTAA 20 6.311119E-4 46.0 35 CGTATTC 25 3.4168843E-5 46.0 20 CGTATAT 25 3.4168843E-5 46.0 34 CAACGTC 20 6.311119E-4 46.0 24 CGAAATA 25 3.4168843E-5 46.0 38 CCGATTC 20 6.311119E-4 46.0 39 ACGCATT 30 1.8611972E-6 46.0 44 GCGAAAC 30 1.8611972E-6 46.0 9 GCAACGT 45 3.092282E-10 46.0 14 GACGTAT 25 3.4168843E-5 46.0 42 CGCATAT 55 1.8189894E-12 46.0 22 CGCGCAA 20 6.311119E-4 46.0 45 CGATTGG 50 1.6370905E-11 46.0 23 >>END_MODULE