##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527316_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1838576 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57739631105812 34.0 31.0 34.0 31.0 34.0 2 32.84225835646718 34.0 31.0 34.0 31.0 34.0 3 32.942949326000125 34.0 31.0 34.0 31.0 34.0 4 36.41026479188241 37.0 37.0 37.0 35.0 37.0 5 36.40113870734743 37.0 37.0 37.0 35.0 37.0 6 36.41154349888174 37.0 37.0 37.0 35.0 37.0 7 36.534515842695654 37.0 37.0 37.0 35.0 37.0 8 36.64492955417671 37.0 37.0 37.0 35.0 37.0 9 38.620255023452934 39.0 39.0 39.0 38.0 39.0 10 38.12333131728033 39.0 39.0 39.0 37.0 39.0 11 37.81084763425608 39.0 38.0 39.0 35.0 39.0 12 37.33498424867941 39.0 37.0 39.0 35.0 39.0 13 37.195328341063956 39.0 37.0 39.0 34.0 39.0 14 38.05123747944061 40.0 38.0 40.0 34.0 40.0 15 38.11670553732889 40.0 38.0 40.0 34.0 40.0 16 38.16590230700281 40.0 38.0 40.0 35.0 40.0 17 38.12856689089817 40.0 38.0 40.0 34.0 40.0 18 38.10090907310875 40.0 38.0 40.0 34.0 40.0 19 38.03428359774086 40.0 38.0 40.0 34.0 40.0 20 37.9705908268138 40.0 38.0 40.0 34.0 40.0 21 33.63500121833419 40.0 34.0 40.0 10.0 40.0 22 34.313611729947525 39.0 34.0 40.0 16.0 40.0 23 36.40207802125123 39.0 34.0 40.0 30.0 40.0 24 37.23334417505722 39.0 36.0 40.0 32.0 40.0 25 37.514379606826154 39.0 36.0 40.0 33.0 40.0 26 37.601656934497136 40.0 36.0 40.0 33.0 40.0 27 37.51646491632655 40.0 36.0 40.0 33.0 40.0 28 37.40085533586863 40.0 36.0 40.0 33.0 40.0 29 37.36932821923053 40.0 35.0 40.0 33.0 40.0 30 37.23230695929894 39.0 35.0 40.0 33.0 40.0 31 37.08431525267381 39.0 35.0 40.0 33.0 40.0 32 36.95380011487151 39.0 35.0 40.0 32.0 40.0 33 36.563003650651375 39.0 35.0 40.0 31.0 40.0 34 36.36569007753827 38.0 35.0 40.0 31.0 40.0 35 36.31752399683233 38.0 35.0 40.0 31.0 40.0 36 36.185591457736855 38.0 35.0 40.0 31.0 40.0 37 36.04365770030719 38.0 35.0 40.0 31.0 40.0 38 35.93875314373733 38.0 35.0 40.0 31.0 40.0 39 35.737389697243955 37.0 35.0 40.0 30.0 40.0 40 30.87083753948708 35.0 30.0 40.0 8.0 40.0 41 31.659233559015238 35.0 30.0 39.0 12.0 40.0 42 33.37641033060368 35.0 30.0 39.0 23.0 40.0 43 34.25362073691814 35.0 33.0 39.0 27.0 40.0 44 34.9684027203662 36.0 34.0 39.0 29.0 40.0 45 35.202154275917884 36.0 34.0 40.0 30.0 40.0 46 35.18390591414225 35.0 34.0 40.0 30.0 40.0 47 35.12176488760867 35.0 34.0 39.0 30.0 40.0 48 34.96424841834115 35.0 34.0 39.0 30.0 40.0 49 34.82118389449226 35.0 34.0 39.0 30.0 40.0 50 34.67602916605025 35.0 34.0 39.0 29.0 40.0 51 34.47894511839598 35.0 34.0 39.0 29.0 40.0 52 34.047726066259976 35.0 34.0 38.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 0.0 13 2.0 14 6.0 15 18.0 16 55.0 17 129.0 18 229.0 19 526.0 20 935.0 21 1542.0 22 2633.0 23 4046.0 24 5933.0 25 8473.0 26 11569.0 27 15761.0 28 21013.0 29 27464.0 30 36270.0 31 48571.0 32 71483.0 33 90152.0 34 155758.0 35 209992.0 36 250811.0 37 290694.0 38 403396.0 39 181114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.18801289693762 0.3553837317576211 0.12618461243919207 0.3304187588655568 8 98.72314225792135 0.9789641548676802 0.14843008937351515 0.1494634978374568 9 94.83415425851311 2.6571107204706252 1.0982956374933643 1.4104393835229003 10 53.64407019345406 31.300582624813988 5.762013645342918 9.293333536389031 11 36.63650564349801 20.276616250837602 21.483854896398082 21.6030232092663 12 30.366598933087346 15.055782301085188 28.313053145477806 26.26456562034966 13 25.750907223851506 16.08440445214122 30.843979253509236 27.32070907049804 14 25.53568631375586 16.643641600891122 31.00421195533935 26.816460130013663 15 27.91094847316619 17.355714422466082 28.787278850588716 25.946058253779015 16 31.213069244893877 19.085857750781038 25.69439609784964 24.006676906475448 17 32.40540505260593 18.640132363307256 23.895612691561297 25.05884989252552 18 31.444443960978496 19.656734342230074 23.297377970777383 25.601443726014043 19 30.75630270383166 20.85053867775931 22.293503232936796 26.099655385472236 20 29.005817545752798 21.629783049490474 24.580599333397153 24.783800071359575 21 34.668297639042386 18.8368063109711 24.834926595365108 21.659969454621404 22 30.129295715814848 18.501438069462452 25.699508750250192 25.669757464472504 23 30.197772624030772 20.025878723533864 24.428307559763642 25.348041092671718 24 30.25085718512588 20.280369155259287 22.215725648545394 27.253048011069435 25 27.303249906449338 19.17946280164649 23.532614371121998 29.984672920782167 26 26.459988599872947 19.573789715518966 23.743484087685253 30.222737596922837 27 27.10189842573818 19.16129656864878 23.62485967400858 30.11194533160446 28 28.773898930476633 21.289356545500432 21.63489570189103 28.30184882213191 29 30.278976773328925 20.210423719226185 22.380200764069585 27.130398743375306 30 29.68389666785599 19.478716136836336 22.61162987007336 28.225757325234312 31 32.20503259043956 19.27187127429054 21.783217011426235 26.739879123843668 32 33.996473357641996 18.73634813029214 23.056920138193906 24.210258373871955 33 32.69454186283298 20.028217490057525 23.93129247852686 23.34594816858264 34 28.251810096509473 21.569627798905238 27.149163265483722 23.029398839101567 35 28.393767785503567 25.725670301363664 24.839984857846506 21.040577055286263 36 30.788719095647938 24.354010930198154 21.846472487403297 23.010797486750615 37 30.27973823219709 25.151530314765342 21.20880507523214 23.359926377805433 38 31.035649328610837 24.080647196526005 21.587141352873093 23.29656212199006 39 30.71322588786104 22.170636405566047 20.63112974388875 26.485007962684165 40 29.120797834846098 26.887330194672398 20.248768612230332 23.74310335825117 41 25.841466439244286 23.3617756350567 22.548972683207 28.247785242492014 42 26.96760971534492 20.550795833297073 23.524782222763704 28.956812228594302 43 25.940020972752826 19.656190443038525 25.50811062474437 28.895677959464283 44 27.07084178190077 20.572116681605763 24.878438530688967 27.47860300580449 45 27.231944722437362 20.345201938891837 24.135635404791532 28.287217933879262 46 27.705191409003486 21.221967435667604 24.090165432378104 26.982675722950805 47 27.007477526085406 21.595571790342092 25.241328071289953 26.15562261228255 48 29.045522186735823 20.7743384010234 24.688291373323704 25.491848038917077 49 27.995470407532785 21.852455378510324 23.8325203853417 26.319553828615188 50 25.753300380294313 22.43486263282018 25.123410726562295 26.688426260323205 51 26.360346267981306 21.645991245398612 24.694654993864816 27.299007492755262 52 26.946832766227775 22.10944774651687 24.508151961082923 26.435567526172427 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 18.5 6 37.0 7 47.5 8 58.0 9 159.5 10 261.0 11 540.5 12 820.0 13 1454.0 14 2716.0 15 3344.0 16 3088.5 17 2833.0 18 3606.0 19 4379.0 20 4277.5 21 4176.0 22 4322.5 23 4469.0 24 4808.0 25 5147.0 26 7402.5 27 9658.0 28 9268.0 29 8878.0 30 9804.5 31 10731.0 32 11450.5 33 12170.0 34 14580.0 35 16990.0 36 20391.0 37 23792.0 38 24278.5 39 26369.5 40 27974.0 41 29640.5 42 31307.0 43 37366.0 44 43425.0 45 44099.5 46 44774.0 47 51787.5 48 58801.0 49 62029.5 50 65258.0 51 71833.5 52 78409.0 53 92143.5 54 105878.0 55 118171.5 56 130465.0 57 141952.5 58 153440.0 59 166963.0 60 180486.0 61 176958.5 62 173431.0 63 171289.5 64 147900.5 65 126653.0 66 113958.0 67 101263.0 68 83717.5 69 66172.0 70 61309.5 71 56447.0 72 47571.5 73 38696.0 74 34017.0 75 29338.0 76 21856.5 77 14375.0 78 10034.5 79 5694.0 80 3775.0 81 1856.0 82 1166.0 83 476.0 84 321.0 85 166.0 86 97.0 87 28.0 88 19.0 89 9.0 90 8.0 91 4.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1838576.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.582646188793193 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28710262935742 6.927017285101142 2 9.352625298283202 1.7924579833960865 3 3.8582773886699027 1.1091752134153376 4 2.080970073454167 0.7976479977351304 5 1.1262316769131542 0.5396139843235 6 0.709192059846385 0.4077561953645613 7 0.4993301695436077 0.33494330422885576 8 0.34190360202156245 0.26210729990772724 9 0.24833028076581262 0.2141695096688212 >10 4.014735961866518 10.573565663893891 >50 2.9123308913352854 20.304775518443993 >100 2.417313422429333 40.8130718915553 >500 0.1089826257803556 6.998160528787645 >1k 0.04070435420712076 7.5512213737274765 >5k 0.0019695655261510047 1.3743162504505344 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 9090 0.49440436511735164 No Hit TCTACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6998 0.38062065424545954 No Hit TCTACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5757 0.31312276457432275 No Hit TCTACCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4434 0.24116490153249037 No Hit TCTACCGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 4003 0.21772284637676115 No Hit TCTACCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3939 0.2142418915508524 No Hit TCTACCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3542 0.19264909364638722 No Hit TCTACCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 3485 0.18954886825456224 No Hit TCTACCGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGAACG 3365 0.18302207795598333 No Hit TCTACCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3301 0.17954112313007456 No Hit TCTACCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3245 0.1764952876574044 No Hit TCTACCGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 3104 0.16882630905657423 No Hit TCTACCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3073 0.16714022156277467 No Hit TCTACCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2930 0.15936246312363483 No Hit TCTACCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2839 0.1544129804805458 No Hit TCTACCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCTACCGGGAAG 2792 0.1518566542802691 No Hit TCTACCGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 2775 0.15093202565463706 No Hit TCTACCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2722 0.14804935993943139 No Hit TCTACCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2709 0.14734229099041868 No Hit TCTACCGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 2472 0.13445188015072534 No Hit TCTACCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2444 0.13292896241439026 No Hit TCTACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCTGACTGCT 2317 0.1260214426817276 No Hit TCTACCGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2141 0.11644881691047855 No Hit TCTACCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2127 0.115687358042311 No Hit TCTACCGGCCCAACCTACACTAACCTAAACAGGTTGATAGGTCAAATTGTGT 2013 0.10948690725866106 No Hit TCTACCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1887 0.1026337774451532 No Hit TCTACCGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACACTGGCTGC 1871 0.10176353873867602 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.631697574644725E-4 0.0 0.0 0.0 0.0 8 3.26339514928945E-4 0.0 0.0 0.0 0.0 9 6.5267902985789E-4 0.0 0.0 0.0 0.0 10 0.00456875320900523 0.0 0.0 0.0 0.0 11 0.007342639085901262 0.0 0.0 0.0 0.0 12 0.011313103184203427 0.0 0.0 0.0 0.0 13 0.016806485018840668 0.0 0.0 0.0 0.0 14 0.02714056965825726 0.0 0.0 0.0 0.0 15 0.03508149785486159 0.0 0.0 0.0 0.0 16 0.04710166998807773 0.0 0.0 0.0 0.0 17 0.05395479980158557 0.0 0.0 0.0 0.0 18 0.058360383253126334 0.0 0.0 0.0 0.0 19 0.06717155015620785 0.0 0.0 0.0 0.0 20 0.07522125819112183 0.0 0.0 0.0 0.0 21 0.0816936585705459 0.0 0.0 0.0 0.0 22 0.08876434806067304 0.0 0.0 0.0 0.0 23 0.09594381738910983 0.0 0.0 0.0 0.0 24 0.10431986493895276 0.0 0.0 0.0 0.0 25 0.11013958628851894 0.0 0.0 0.0 0.0 26 0.1179173447276588 0.0 0.0 0.0 0.0 27 0.12683729146904996 0.0 0.0 0.0 0.0 28 0.14532986398169018 0.0 0.0 0.0 0.0 29 0.15049690630139848 0.0 0.0 0.0 0.0 30 0.15702369659997736 0.0 0.0 0.0 0.0 31 0.16246268851545978 0.0 0.0 0.0 0.0 32 0.17002288727798034 0.0 0.0 0.0 0.0 33 0.17595138846585617 0.0 0.0 0.0 0.0 34 0.1856871839945697 0.0 0.0 0.0 0.0 35 0.20532194480946123 0.0 0.0 0.0 0.0 36 0.21598236896380676 0.0 0.0 0.0 0.0 37 0.22185648023252777 0.0 0.0 0.0 0.0 38 0.22870961004603563 0.0 0.0 0.0 0.0 39 0.23578029953616278 0.0 0.0 0.0 0.0 40 0.24268781926882543 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCAA 20 6.3124485E-4 46.0 19 CGTTATA 20 6.3124485E-4 46.0 36 CGTTAGA 20 6.3124485E-4 46.0 23 TATTCGC 20 6.3124485E-4 46.0 22 CACGTTA 30 1.8620158E-6 46.0 43 CGTCATA 20 6.3124485E-4 46.0 38 TATAACG 25 3.4179604E-5 46.0 45 CGATATC 30 1.8620158E-6 46.0 33 AATACGC 30 1.8620158E-6 46.0 36 ACCGGGG 96720 0.0 44.711124 4 TCTACCG 187795 0.0 44.68463 1 TACCGGG 176375 0.0 44.659447 3 CTACCGG 185820 0.0 44.650845 2 CGGGATA 1685 0.0 44.635014 6 CCGGGAT 14115 0.0 44.533474 5 CGGGATT 5095 0.0 44.23945 6 CCGGGGG 37720 0.0 44.22561 5 ACCGGGA 55870 0.0 44.20512 4 ACCGGGC 15580 0.0 44.139923 4 CGGGGGG 17740 0.0 43.990417 6 >>END_MODULE