##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527306_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2614194 Sequences flagged as poor quality 0 Sequence length 50 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.471382384015875 33.0 31.0 34.0 31.0 34.0 2 32.249867071839354 33.0 31.0 34.0 31.0 34.0 3 32.85415542993366 34.0 31.0 34.0 31.0 34.0 4 36.27456837556815 37.0 37.0 37.0 35.0 37.0 5 36.26708193806581 37.0 37.0 37.0 35.0 37.0 6 36.4191984221523 37.0 37.0 37.0 35.0 37.0 7 36.47240449637632 37.0 37.0 37.0 35.0 37.0 8 36.61098372959314 37.0 37.0 37.0 35.0 37.0 9 38.65118273548176 39.0 39.0 39.0 38.0 39.0 10 38.13795609660186 39.0 39.0 39.0 37.0 39.0 11 37.856260476460434 39.0 38.0 39.0 35.0 39.0 12 37.33973721919644 39.0 37.0 39.0 35.0 39.0 13 37.20362681576042 39.0 37.0 39.0 34.0 39.0 14 37.95942917778864 40.0 38.0 40.0 34.0 40.0 15 37.94785314326328 40.0 38.0 40.0 34.0 40.0 16 37.703590475687726 40.0 37.0 40.0 33.0 40.0 17 37.74360433846914 40.0 37.0 40.0 33.0 40.0 18 37.73261969081101 40.0 37.0 40.0 33.0 40.0 19 37.579181575659646 40.0 37.0 40.0 33.0 40.0 20 37.35266472189899 40.0 36.0 40.0 32.0 40.0 21 37.58259333469513 40.0 37.0 40.0 33.0 40.0 22 37.35961753412333 40.0 36.0 40.0 33.0 40.0 23 37.35128532924488 39.0 36.0 40.0 33.0 40.0 24 37.3485965463925 39.0 36.0 40.0 33.0 40.0 25 37.25779188537653 39.0 36.0 40.0 33.0 40.0 26 37.1063628024546 39.0 35.0 40.0 33.0 40.0 27 36.914914501372124 39.0 35.0 40.0 32.0 40.0 28 36.691128890969836 39.0 35.0 40.0 31.0 40.0 29 37.00150753922624 39.0 35.0 40.0 32.0 40.0 30 37.04664726489312 39.0 35.0 40.0 32.0 40.0 31 37.02024486323509 39.0 35.0 40.0 32.0 40.0 32 36.2292729613793 39.0 35.0 40.0 30.0 40.0 33 36.28820929127678 39.0 35.0 40.0 30.0 40.0 34 36.20668205955641 39.0 35.0 40.0 30.0 40.0 35 36.248033619540095 39.0 35.0 40.0 31.0 40.0 36 36.019557079543446 38.0 35.0 40.0 30.0 40.0 37 35.85505169088446 38.0 35.0 40.0 30.0 40.0 38 35.65843468388344 38.0 35.0 40.0 29.0 40.0 39 35.53246507336487 37.0 35.0 40.0 29.0 40.0 40 35.29276480628446 37.0 34.0 40.0 29.0 40.0 41 35.13378693394599 37.0 34.0 40.0 28.0 40.0 42 34.936787399863974 36.0 34.0 40.0 28.0 40.0 43 34.855107539838286 36.0 34.0 40.0 28.0 40.0 44 34.654098739420256 35.0 34.0 40.0 27.0 40.0 45 34.53408507555292 35.0 34.0 39.0 27.0 40.0 46 34.20860961351759 35.0 33.0 39.0 26.0 40.0 47 34.089549972190284 35.0 33.0 39.0 26.0 40.0 48 33.947959103264715 35.0 33.0 39.0 26.0 40.0 49 33.67221904724745 35.0 33.0 38.0 25.0 40.0 50 33.16079258081076 35.0 32.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 12.0 15 20.0 16 71.0 17 227.0 18 422.0 19 833.0 20 1662.0 21 2860.0 22 4515.0 23 6754.0 24 9519.0 25 13482.0 26 18285.0 27 24866.0 28 32869.0 29 41723.0 30 52629.0 31 64065.0 32 77835.0 33 106639.0 34 193782.0 35 241364.0 36 324619.0 37 499730.0 38 658450.0 39 236958.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 98.6580567471274 0.538330361097914 0.3310771886095676 0.4725357031651055 8 98.17951536879053 1.2124195832443958 0.29554042278423104 0.3125246251808397 9 93.94700622830592 3.477668451538027 1.243442529513877 1.3318827906421635 10 54.71124178236199 29.473902854952616 6.675174068948212 9.13968129373719 11 36.90992328801917 20.40349721558538 18.97602090740014 23.71055858899531 12 29.958832435542277 16.356475456679956 27.9911131308541 25.69357897692367 13 27.968620538491024 15.35398673549094 28.300807055635502 28.376585670382536 14 25.98976969574561 16.831000300666286 32.85953529080091 24.31969471278719 15 29.341739748465496 15.385965999462933 29.178553695708885 26.09374055636269 16 34.28743237877526 16.384782460674305 24.037389727005724 25.290395433544717 17 31.27308072775012 17.48236741420109 22.368959610495626 28.87559224755317 18 32.23593964334705 18.448822084359463 21.13454472009346 28.180693552200026 19 34.741721540176435 19.17539402201979 21.078198481061467 25.004685956742307 20 33.60305317814974 21.387968911259073 21.246701660244035 23.762276250347146 21 34.14027421071275 18.08813729968013 25.004379935077502 22.767208554529617 22 33.164294616237356 16.86646056107542 24.096375402896648 25.87286941979057 23 30.952790802824886 20.34263715699753 22.302132129444104 26.402439910733484 24 31.225494358873135 19.214258773449867 21.89160406610986 27.668642801567138 25 28.260182679632806 18.03997714018164 23.93116195661072 29.76867822357484 26 27.8687044649326 17.26907031383287 24.0924353739623 30.76978984727224 27 27.938898184296956 17.8331447474824 22.026330104039715 32.20162696418093 28 29.09275287143953 22.29023553722486 20.577279268485814 28.039732322849797 29 30.856776505492707 19.367996407305654 22.238058843375814 27.53716824382582 30 30.047234443962463 19.798836658641246 22.175515665631547 27.978413231764744 31 34.26272112934235 19.414167425982924 20.554518907166035 25.768592537508695 32 35.304801403415354 18.542579471913715 22.10742584521271 24.045193279458218 33 34.202052334295004 18.44029173045306 23.257570019669544 24.100085915582394 34 28.95726177934767 21.789239819233003 26.455687680409333 22.797810721009995 35 29.046849621718966 25.46945636016302 23.547028261865798 21.936665756252214 36 31.474825510271998 24.19579419124977 19.909080963386803 24.42029933509143 37 30.519655389003265 23.773254777571978 20.718470014084648 24.988619819340112 38 32.68456740394936 22.741808756350906 19.93723495654875 24.636388883150985 39 31.85245624463984 20.53883529684484 19.531603239851364 28.077105218663956 40 29.212369089669703 21.28021103254005 21.98662379303143 27.52079608475882 41 27.592825934112003 21.551575743804783 21.657535745243084 29.19806257684013 42 26.70031374871184 18.75201304876379 24.000246347440168 30.547426855084204 43 26.33565068239006 18.37759554187639 24.888741998489785 30.398011777243774 44 28.872646789029428 18.50562735588866 23.74104599735138 28.880679857730527 45 27.542064590462683 20.649882908460505 23.062710724605747 28.74534177647107 46 26.465786395347855 21.38452616753003 23.06362878960016 29.086058647521952 47 27.127979025275096 20.339079655144186 25.30875673343294 27.224184586147775 48 29.311864383439023 20.182855595261866 24.686461678054496 25.818818343244608 49 28.652349443078823 19.365548233987226 23.28912850385243 28.692973819081523 50 25.547109357606974 20.75764078717953 24.660947121751484 29.034302733462013 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 53.0 8 106.0 9 199.0 10 292.0 11 379.0 12 466.0 13 1026.0 14 1586.0 15 1994.5 16 2403.0 17 2495.0 18 2587.0 19 2366.5 20 2146.0 21 2799.5 22 3453.0 23 3836.0 24 4219.0 25 3870.0 26 3521.0 27 4484.5 28 5448.0 29 6686.5 30 7925.0 31 9402.0 32 10879.0 33 13241.0 34 15603.0 35 16879.5 36 18156.0 37 22748.0 38 27340.0 39 27205.0 40 27070.0 41 29714.0 42 32358.0 43 34315.0 44 36272.0 45 39256.5 46 42241.0 47 50551.5 48 58862.0 49 64004.5 50 69147.0 51 79057.5 52 88968.0 53 93550.5 54 98133.0 55 113719.5 56 129306.0 57 152006.5 58 174707.0 59 209164.0 60 243621.0 61 260163.0 62 276705.0 63 280260.5 64 283816.0 65 292459.0 66 301102.0 67 251973.5 68 202845.0 69 172065.0 70 141285.0 71 121382.0 72 101479.0 73 86330.0 74 71181.0 75 60721.0 76 50261.0 77 49661.5 78 49062.0 79 34242.0 80 19422.0 81 12741.0 82 6060.0 83 4310.5 84 2561.0 85 1577.5 86 594.0 87 478.5 88 363.0 89 426.0 90 489.0 91 284.0 92 79.0 93 60.5 94 42.0 95 37.5 96 33.0 97 16.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2614194.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.689770190045742 #Duplication Level Percentage of deduplicated Percentage of total 1 68.0531561120472 5.2331313120894976 2 10.697237647626705 1.6451859835710976 3 4.7203534047196 1.0889529869428112 4 2.6103878466047834 0.8029313058911663 5 1.4803324847789483 0.5691708306404749 6 0.9049199114330507 0.41751756955900227 7 0.6387771382912941 0.34384345772805835 8 0.4464786004059217 0.2746654265515841 9 0.3527756349416928 0.2441487205214179 >10 3.7847947362418033 7.542808752313608 >50 2.8938048936939245 16.478716446643936 >100 3.2106145675902336 44.665117389825085 >500 0.14414580907462612 7.439999646914765 >1k 0.05340654077225357 7.473891047051303 >5k 0.007777651568774791 4.351735522002461 >10k+ 0.001037020209169972 1.428183601753735 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 23536 0.9003157378526613 No Hit GTTGCCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 12283 0.46985801359807267 No Hit GTTGCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 9814 0.3754120772980123 No Hit GTTGCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 9231 0.35311074847543833 No Hit GTTGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 8847 0.33842170856485787 No Hit GTTGCCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 8528 0.32621909468080795 No Hit GTTGCCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 8109 0.310191209986711 No Hit GTTGCCGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 7712 0.29500488487082444 No Hit GTTGCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 7344 0.2809278882898515 No Hit GTTGCCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 7236 0.2767965958150007 No Hit GTTGCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 7064 0.2702171300217199 No Hit GTTGCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTTGCCGGGA 7035 0.26910780148680624 No Hit GTTGCCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 6763 0.25870306488347844 No Hit GTTGCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 5852 0.2238548478039503 No Hit GTTGCCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 5282 0.20205080418668242 No Hit GTTGCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 5172 0.1978430062956307 No Hit GTTGCCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 5153 0.19711620484172176 No Hit GTTGCCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 4521 0.17294049332222475 No Hit GTTGCCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 4012 0.15346986489908554 No Hit GTTGCCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 3804 0.14551330161418777 No Hit GTTGCCGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 3719 0.14226182142564783 No Hit GTTGCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 3682 0.14084647122593044 No Hit GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3666 0.14023442789632293 No Hit GTTGCCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 3551 0.13583536646476888 No Hit GTTGCCGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 3508 0.13419050001644867 No Hit GTTGCCGGGAGACTCCTCTCTCGCTCTCTCCGCGGCTACAGCTGGACCCT 3435 0.13139805232511437 No Hit GTTGCCGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACT 3355 0.12833783567707677 No Hit GTTGCCGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTA 3343 0.1278788031798711 No Hit GTTGCCGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCT 3061 0.11709153949553859 No Hit GTTGCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3055 0.11686202324693577 No Hit GTTGCCGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 2955 0.11303675243688877 No Hit GTTGCCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 2852 0.10909672350254036 No Hit GTTGCCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 2803 0.10722234080561732 No Hit GTTGCCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2716 0.10389435520087645 No Hit GTTGCCGGGGTCCGTGGTCGTTCCGCGCCGTCATGTCTGTCCTGACGCCA 2687 0.10278502666596283 No Hit GTTGCCGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 2679 0.10247900500115906 No Hit GTTGCCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 2670 0.10213473062825483 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0013005920754159792 0.0 0.0 0.0 0.0 8 0.0021038989455258485 0.0 0.0 0.0 0.0 9 0.002486426026530548 0.0 0.0 0.0 0.0 10 0.006273444128477076 0.0 0.0 0.0 0.0 11 0.011016779932935351 0.0 0.0 0.0 0.0 12 0.01545409407258987 0.0 0.0 0.0 0.0 13 0.022989877568382455 0.0 0.0 0.0 0.0 14 0.038367466224771385 0.0 0.0 0.0 0.0 15 0.0462475240934682 0.0 0.0 0.0 0.0 16 0.05512215237277723 0.0 0.0 0.0 0.0 17 0.06250492503616793 0.0 0.0 0.0 0.0 18 0.06782205146213326 0.0 0.0 0.0 0.0 19 0.07776775556825545 0.0 0.0 0.0 0.0 20 0.0844619794858377 0.0 0.0 0.0 0.0 21 0.08997036945230538 0.0 0.0 0.0 0.0 22 0.09494322150536648 0.0 0.0 0.0 0.0 23 0.10289978479026422 0.0 0.0 0.0 0.0 24 0.11074158995086057 0.0 0.0 0.0 0.0 25 0.11678551783073483 0.0 0.0 0.0 0.0 26 0.12336498362401566 0.0 0.0 0.0 0.0 27 0.1340374891840468 0.0 0.0 0.0 0.0 28 0.17087484708479936 0.0 0.0 0.0 0.0 29 0.17856364141299383 0.0 0.0 0.0 0.0 30 0.19099577154564656 0.0 0.0 0.0 0.0 31 0.1996408835763528 0.0 0.0 0.0 0.0 32 0.20893629164476699 0.0 0.0 0.0 0.0 33 0.215286241189445 0.0 0.0 0.0 0.0 34 0.22844517277600668 0.0 0.0 0.0 0.0 35 0.27102043689182975 0.0 0.0 0.0 0.0 36 0.28119565724655476 0.0 0.0 0.0 0.0 37 0.28926697865575396 0.0 0.0 0.0 0.0 38 0.29714703652445074 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAGAC 20 7.858324E-4 44.000004 42 TATTACG 20 7.858324E-4 44.000004 35 CGAATAG 20 7.858324E-4 44.000004 32 CGTAATA 20 7.858324E-4 44.000004 20 GTACGTA 20 7.858324E-4 44.000004 10 TATCACG 25 4.4444023E-5 44.0 25 AATTTCG 30 2.528961E-6 44.0 34 TTATCGC 30 2.528961E-6 44.0 29 CGTTATG 25 4.4444023E-5 44.0 39 ATATCGT 25 4.4444023E-5 44.0 17 TAAGGTA 30 2.528961E-6 44.0 33 ACCGTTA 60 0.0 44.0 32 ATAACGA 35 1.4470243E-7 44.0 30 ACGTAAC 50 2.7284841E-11 44.0 11 CGCAATA 50 2.7284841E-11 44.0 11 GACGAAT 25 4.4444023E-5 44.0 44 TATCGCG 25 4.4444023E-5 44.0 29 GCCGGAT 2125 0.0 42.239998 4 CGGGATA 2430 0.0 41.827164 6 TATCGGG 85 0.0 41.411762 11 >>END_MODULE