##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527305_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2799703 Sequences flagged as poor quality 0 Sequence length 52 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40858798236813 33.0 31.0 34.0 31.0 34.0 2 32.081950478318596 31.0 31.0 34.0 30.0 34.0 3 32.78719314155823 34.0 31.0 34.0 31.0 34.0 4 36.20812350452887 37.0 37.0 37.0 35.0 37.0 5 36.279974697316106 37.0 37.0 37.0 35.0 37.0 6 36.45962696757478 37.0 37.0 37.0 35.0 37.0 7 36.47085565861808 37.0 37.0 37.0 35.0 37.0 8 36.573736928524205 37.0 37.0 37.0 35.0 37.0 9 38.617000088938006 39.0 39.0 39.0 38.0 39.0 10 38.053416023056734 39.0 38.0 39.0 37.0 39.0 11 37.81425851242078 39.0 38.0 39.0 35.0 39.0 12 37.3417055309081 39.0 37.0 39.0 35.0 39.0 13 37.250375486256935 39.0 37.0 39.0 35.0 39.0 14 38.03267668034788 40.0 38.0 40.0 34.0 40.0 15 37.923488670048215 40.0 38.0 40.0 34.0 40.0 16 32.77433606350388 39.0 34.0 40.0 3.0 40.0 17 34.38703498192487 39.0 34.0 40.0 17.0 40.0 18 36.41421750807139 39.0 34.0 40.0 30.0 40.0 19 37.251859215066744 39.0 36.0 40.0 32.0 40.0 20 37.56592217103029 39.0 37.0 40.0 33.0 40.0 21 37.796968106974205 40.0 37.0 40.0 33.0 40.0 22 37.782167608492756 40.0 37.0 40.0 34.0 40.0 23 37.694809056532065 40.0 37.0 40.0 33.0 40.0 24 37.62920959830382 40.0 36.0 40.0 33.0 40.0 25 37.55068019714948 40.0 36.0 40.0 33.0 40.0 26 37.446750958941 40.0 36.0 40.0 33.0 40.0 27 37.272995028401226 39.0 35.0 40.0 33.0 40.0 28 37.130518487139526 39.0 35.0 40.0 33.0 40.0 29 36.88006870728788 39.0 35.0 40.0 32.0 40.0 30 36.83331874845296 39.0 35.0 40.0 32.0 40.0 31 36.779479109034064 39.0 35.0 40.0 32.0 40.0 32 36.60585712127322 39.0 35.0 40.0 31.0 40.0 33 36.125481881470996 38.0 35.0 40.0 30.0 40.0 34 35.94588747449283 38.0 35.0 40.0 30.0 40.0 35 35.93301003713608 38.0 34.0 40.0 30.0 40.0 36 35.85665836697678 38.0 34.0 40.0 30.0 40.0 37 35.45212224296649 37.0 34.0 40.0 29.0 40.0 38 35.45029133447369 37.0 34.0 40.0 29.0 40.0 39 34.99693681794105 37.0 34.0 40.0 28.0 40.0 40 34.80436639172083 36.0 34.0 40.0 27.0 40.0 41 34.71865765761583 36.0 33.0 39.0 27.0 40.0 42 34.581229866167945 36.0 33.0 39.0 27.0 40.0 43 34.51095419764168 35.0 33.0 39.0 27.0 40.0 44 34.7900966638247 35.0 34.0 39.0 28.0 40.0 45 34.870280883365126 35.0 34.0 39.0 29.0 40.0 46 34.79200579490039 35.0 34.0 39.0 29.0 40.0 47 34.49339769254096 35.0 34.0 39.0 28.0 40.0 48 34.41027994755158 35.0 34.0 39.0 28.0 40.0 49 34.33442047245726 35.0 34.0 38.0 28.0 40.0 50 33.81163251959226 35.0 33.0 38.0 27.0 40.0 51 33.900543736246306 35.0 33.0 37.0 27.0 40.0 52 33.52459028689829 35.0 33.0 37.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 2.0 14 14.0 15 29.0 16 66.0 17 132.0 18 392.0 19 804.0 20 1535.0 21 2879.0 22 4633.0 23 7058.0 24 10274.0 25 14373.0 26 20283.0 27 26827.0 28 34329.0 29 43310.0 30 55354.0 31 71402.0 32 97453.0 33 145118.0 34 230568.0 35 305126.0 36 421008.0 37 569646.0 38 560713.0 39 176374.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 98.67807406714212 0.5243413319198501 0.3310351133673822 0.4665494875706459 8 98.174306346066 1.2093068443331312 0.3013891116307694 0.3149976979701061 9 93.90163885240685 3.4729040901838517 1.232380720383555 1.3930763370257488 10 54.88182139319778 29.38704569734718 6.611451286082845 9.119681623372193 11 37.06521727483237 20.325691689439914 18.803994566566526 23.805096469161192 12 30.194809949483925 16.2381152572255 27.96714508646096 25.599929706829617 13 28.170809546584046 15.181503180873113 28.252246756173783 28.395440516369057 14 26.257392301969173 16.804961097659287 32.71704177193081 24.22060482844073 15 29.54931290926216 15.482570829834449 29.041401891557783 25.926714369345603 16 32.14215936476119 24.65247206578698 21.374160044833328 21.831208524618503 17 31.40665277709814 17.383486748415812 22.240644811253194 28.969215663232852 18 32.35814656054588 18.372948844931052 21.101452546930872 28.16745204759219 19 34.827265606387535 19.149924116950974 21.06201979281374 24.96079048384775 20 33.638960989790704 21.38223232964354 21.262612498540022 23.716194182025735 21 34.3329631750225 18.024911928158094 24.911320950829428 22.730803945989987 22 33.02557449843787 16.81717667909775 24.147597084405025 26.009651738059357 23 31.12083674589769 20.32708469434079 22.11756032693468 26.434518232826836 24 31.276103215233903 19.267508017814748 21.840459505883302 27.61592926106805 25 28.32336144226727 17.97083476354456 23.85660193241926 29.849201861768908 26 27.91906855834351 17.17478603980494 24.02186946258228 30.884275939269273 27 27.974181547114103 17.847035917738417 21.885642869975854 32.29313966517163 28 29.220206571911376 22.262182810105216 20.44141825043585 28.07619236754756 29 31.20870320887608 19.234290208639987 22.03569450045237 27.521312082031557 30 30.259316791816847 19.822888356372086 21.974973774003885 27.942821077807185 31 34.51866144373171 19.317656194246318 20.535106759538422 25.62857560248355 32 35.53598363826449 18.05077181401027 22.170744539688673 24.242500008036565 33 34.435402612348526 18.36037608274878 23.318366269565022 23.885855035337677 34 29.019542430036328 21.71519621902752 26.39472829796589 22.870533052970263 35 29.069261989575324 25.530529488306435 23.487491351761243 21.912717170357 36 31.43694170417362 24.161562851488174 19.965403473154115 24.436091971184087 37 30.86020195713617 23.784308549871184 20.529749048381206 24.825740444611448 38 32.67743042744177 22.754306438932986 19.847533827695298 24.72072930592995 39 32.131515378595516 20.48349414205721 19.48631694147558 27.898673537871694 40 29.253888716053094 21.29600889808669 21.871998565562134 27.578103820298082 41 27.549315052346625 21.5558936072862 21.628365580206186 29.266425760160992 42 26.64871952489246 18.712734886521893 24.037263952640693 30.601281635944954 43 26.360010329667112 18.265008824150275 24.942252803243772 30.43272804293884 44 28.90574464505699 18.3628406298811 23.789094771838297 28.94231995322361 45 27.381190076233086 20.640725105484403 22.976937196552637 29.001147621729878 46 26.162560814486397 21.348550185501818 23.16949333554309 29.319395664468693 47 27.43812468679713 20.285866036504586 25.19006480330235 27.08594447339593 48 29.511987521533534 20.16006697853308 24.63372007673671 25.694225423196677 49 28.822950148640768 19.209573301168017 23.32247384811889 28.645002702072325 50 25.536565842876907 20.92275502080042 24.464023505350387 29.076655630972287 51 25.74473078037206 21.584110886047554 24.84588543856259 27.825272895017793 52 27.083087027445412 20.036482441173227 24.894676328167666 27.9857542032137 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 65.0 8 130.0 9 205.5 10 281.0 11 360.5 12 440.0 13 1023.5 14 2044.5 15 2482.0 16 2567.5 17 2653.0 18 2489.0 19 2325.0 20 2957.0 21 3589.0 22 3778.5 23 3968.0 24 3949.0 25 3930.0 26 4135.0 27 4340.0 28 5867.5 29 7395.0 30 7849.5 31 8304.0 32 9921.0 33 11538.0 34 15233.0 35 18928.0 36 20919.0 37 22910.0 38 23841.5 39 26493.5 40 28214.0 41 29356.0 42 30498.0 43 35521.0 44 40544.0 45 43855.0 46 47166.0 47 53715.5 48 60265.0 49 68633.5 50 77002.0 51 80019.5 52 83037.0 53 95906.5 54 108776.0 55 122651.5 56 136527.0 57 160534.5 58 184542.0 59 218257.5 60 251973.0 61 269653.0 62 287333.0 63 293195.5 64 297753.5 65 296449.0 66 264479.5 67 232510.0 68 197844.0 69 163178.0 70 137494.5 71 111811.0 72 98778.5 73 85746.0 74 73575.0 75 61404.0 76 57531.5 77 53659.0 78 40597.0 79 27535.0 80 17811.0 81 8087.0 82 5578.0 83 3069.0 84 2049.0 85 1029.0 86 679.0 87 329.0 88 257.5 89 128.5 90 71.0 91 59.0 92 47.0 93 39.0 94 31.0 95 32.5 96 34.0 97 17.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2799703.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.336671981052898 #Duplication Level Percentage of deduplicated Percentage of total 1 69.97713423891508 5.833764143239407 2 10.303561550126599 1.7179482575998872 3 4.408303608808508 1.1025174353858478 4 2.34475973523746 0.7818997114822057 5 1.3373780583524306 0.5574641093570818 6 0.8255275462546199 0.41292914186689444 7 0.5366899352520319 0.31319455620100956 8 0.39783976301708884 0.26533276842346315 9 0.29706300677051223 0.2228865160635951 >10 3.6571784673346937 8.035961939151097 >50 2.808054568774441 17.263426921229946 >100 2.9205948913394972 43.41593490606454 >500 0.12592617592942323 7.026710066585881 >1k 0.05255186869495616 7.752026281175029 >5k 0.006445040500324811 3.9067633408071463 >10k+ 9.915446923576632E-4 1.39123990536699 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 22254 0.7948700272850371 No Hit GTTGCCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 11407 0.40743607446932767 No Hit GTTGCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 9539 0.3407147115247582 No Hit GTTGCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 9491 0.33900024395444806 No Hit GTTGCCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 8421 0.30078190436628455 No Hit GTTGCCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 7555 0.2698500519519392 No Hit GTTGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 7433 0.2654924468774009 No Hit GTTGCCGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTGC 7393 0.2640637239021425 No Hit GTTGCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6961 0.24863351576935125 No Hit GTTGCCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 6934 0.2476691277610518 No Hit GTTGCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6804 0.24302577809146184 No Hit GTTGCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTTGCCGGGAAG 6733 0.24048979481037808 No Hit GTTGCCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 6203 0.22155921538820367 No Hit GTTGCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 5915 0.21127240996634283 No Hit GTTGCCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 5142 0.18366233846947336 No Hit GTTGCCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 4790 0.17108957628719904 No Hit GTTGCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4788 0.1710181401384361 No Hit GTTGCCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 4119 0.1471227483772386 No Hit GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 3629 0.1296208919303226 No Hit GTTGCCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3599 0.12854934969887877 No Hit GTTGCCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 3582 0.12794214243439392 No Hit GTTGCCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 3498 0.1249418241863512 No Hit GTTGCCGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 3421 0.12219153245897868 No Hit GTTGCCGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACT 3309 0.11819110812825502 No Hit GTTGCCGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACTCG 3294 0.11765533701253311 No Hit GTTGCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2897 0.10347526148309302 No Hit GTTGCCGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 2830 0.10108215049953514 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 8.929518595365294E-4 0.0 0.0 0.0 0.0 8 0.0019287760165989036 0.0 0.0 0.0 0.0 9 0.0023573929091764375 0.0 0.0 0.0 0.0 10 0.0052148388596933316 0.0 0.0 0.0 0.0 11 0.009179545116035522 0.0 0.0 0.0 0.0 12 0.013179969446759175 0.0 0.0 0.0 0.0 13 0.02035930239743287 0.0 0.0 0.0 0.0 14 0.0353251755632651 0.0 0.0 0.0 0.0 15 0.04261166273708318 0.0 0.0 0.0 0.0 16 0.053005622382088384 0.0 0.0 0.0 0.0 17 0.06018495533276208 0.0 0.0 0.0 0.0 18 0.06693567139085825 0.0 0.0 0.0 0.0 19 0.07707960451519322 0.0 0.0 0.0 0.0 20 0.08440180976339276 0.0 0.0 0.0 0.0 21 0.0893309040280344 0.0 0.0 0.0 0.0 22 0.09433143444143896 0.0 0.0 0.0 0.0 23 0.10218941080536043 0.0 0.0 0.0 0.0 24 0.10951161605355997 0.0 0.0 0.0 0.0 25 0.1150836356570679 0.0 0.0 0.0 0.0 26 0.12308448431851521 0.0 0.0 0.0 0.0 27 0.13401421507924233 0.0 0.0 0.0 0.0 28 0.1712324485847249 0.0 0.0 0.0 0.0 29 0.17834034538663565 0.0 0.0 0.0 0.0 30 0.18937723037050716 0.0 0.0 0.0 0.0 31 0.19852105741216122 0.0 0.0 0.0 0.0 32 0.20684336874304168 0.0 0.0 0.0 0.0 33 0.21341549442923052 0.0 0.0 0.0 0.0 34 0.2283456495206813 0.0 0.0 0.0 0.0 35 0.2704929772908055 0.0 0.0 0.0 0.0 36 0.27970824048122245 0.0 0.0 0.0 0.0 37 0.28756621684514394 0.0 0.0 0.0 0.0 38 0.2950670124652508 0.0 0.0 0.0 0.0 39 0.304067967209379 0.0 0.0 0.0 0.0 40 0.31039006637489763 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAATA 55 1.8189894E-12 46.000004 13 ACGTAAC 55 1.8189894E-12 46.000004 11 AATTTCG 25 3.418423E-5 46.0 34 CGTATAC 40 5.6170393E-9 46.0 38 CGATTTA 20 6.313015E-4 46.0 39 TACGGTA 20 6.313015E-4 46.0 38 TATGCGA 30 1.8623687E-6 46.0 37 CATTACG 20 6.313015E-4 46.0 40 ATATCGC 20 6.313015E-4 46.0 12 ATAACGA 40 5.6170393E-9 46.0 30 ATACGCA 75 0.0 46.0 14 GCCGGAT 2155 0.0 43.65197 4 CGGGATA 2430 0.0 43.444443 6 GTTGCCG 294990 0.0 43.08709 1 TTGCCGG 290765 0.0 43.01154 2 TCCGATA 75 0.0 42.93333 31 CCGGGAC 13950 0.0 42.867386 5 TGCCGGG 275665 0.0 42.80946 3 GCCGGGA 81295 0.0 42.576664 4 ACGTTAT 65 0.0 42.46154 26 >>END_MODULE