##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527299_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2919457 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41592083733379 33.0 31.0 34.0 31.0 34.0 2 32.713020263699725 34.0 31.0 34.0 31.0 34.0 3 33.02968394465135 34.0 31.0 34.0 31.0 34.0 4 35.96518325154301 37.0 35.0 37.0 35.0 37.0 5 36.34118433667631 37.0 37.0 37.0 35.0 37.0 6 36.352924876098534 37.0 37.0 37.0 35.0 37.0 7 36.5173431223683 37.0 37.0 37.0 35.0 37.0 8 36.61593542908835 37.0 37.0 37.0 35.0 37.0 9 38.69686588978704 39.0 39.0 39.0 39.0 39.0 10 38.13095825696354 39.0 39.0 39.0 37.0 39.0 11 37.917971389885174 39.0 38.0 39.0 35.0 39.0 12 37.353971988626654 39.0 37.0 39.0 35.0 39.0 13 37.22095444461076 39.0 37.0 39.0 35.0 39.0 14 37.96225428221755 40.0 38.0 40.0 34.0 40.0 15 37.85191321536848 40.0 37.0 40.0 34.0 40.0 16 32.70863520168305 39.0 34.0 40.0 3.0 40.0 17 34.39266617045567 39.0 34.0 40.0 17.0 40.0 18 36.40813788317485 39.0 34.0 40.0 30.0 40.0 19 37.166568646155774 39.0 36.0 40.0 32.0 40.0 20 37.500880129421326 39.0 36.0 40.0 33.0 40.0 21 37.76017663558669 40.0 37.0 40.0 33.0 40.0 22 37.79763291598403 40.0 37.0 40.0 34.0 40.0 23 37.77978815923646 40.0 37.0 40.0 34.0 40.0 24 37.771703094102776 40.0 36.0 40.0 34.0 40.0 25 37.7166952621669 40.0 36.0 40.0 34.0 40.0 26 37.5971737210036 40.0 36.0 40.0 34.0 40.0 27 37.510323666353024 40.0 36.0 40.0 34.0 40.0 28 37.35778708163881 40.0 35.0 40.0 33.0 40.0 29 37.16835664988387 40.0 35.0 40.0 33.0 40.0 30 37.14820255958557 39.0 35.0 40.0 33.0 40.0 31 37.10151476798597 39.0 35.0 40.0 32.0 40.0 32 36.94918609864779 39.0 35.0 40.0 32.0 40.0 33 36.600324991941996 39.0 35.0 40.0 31.0 40.0 34 36.399377007436655 39.0 35.0 40.0 30.0 40.0 35 36.38246050549811 39.0 35.0 40.0 30.0 40.0 36 36.4199383652508 39.0 35.0 40.0 31.0 40.0 37 36.1474548177966 38.0 35.0 40.0 30.0 40.0 38 36.18987674762807 38.0 35.0 40.0 30.0 40.0 39 35.82925591985085 38.0 35.0 40.0 30.0 40.0 40 35.72866118596712 38.0 35.0 40.0 29.0 40.0 41 35.68675407789873 38.0 35.0 40.0 29.0 40.0 42 35.70163938019981 38.0 35.0 40.0 30.0 40.0 43 35.59989957036531 38.0 34.0 40.0 30.0 40.0 44 35.87363437789973 38.0 35.0 40.0 30.0 40.0 45 35.96991084300951 38.0 35.0 40.0 31.0 40.0 46 35.8890112099613 38.0 35.0 40.0 31.0 40.0 47 35.59573338466708 37.0 35.0 40.0 30.0 40.0 48 35.56345580702165 37.0 35.0 40.0 30.0 40.0 49 35.5140123659982 37.0 35.0 40.0 30.0 40.0 50 34.99005842524826 36.0 34.0 40.0 28.0 40.0 51 35.092351420144226 36.0 34.0 40.0 29.0 40.0 52 34.72865296526032 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 9.0 15 25.0 16 69.0 17 147.0 18 341.0 19 650.0 20 1347.0 21 2318.0 22 4064.0 23 6401.0 24 9421.0 25 13459.0 26 18658.0 27 24676.0 28 32030.0 29 39708.0 30 50810.0 31 66144.0 32 91372.0 33 141826.0 34 219563.0 35 259120.0 36 307544.0 37 527339.0 38 748189.0 39 354222.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.54025697244386 0.3489690034824969 0.07559624957654797 0.03517777449710682 8 99.26164351795556 0.5779499406910258 0.07590452608139117 0.08450201527201805 9 97.6199683708306 1.2914387846781097 0.4485765674918315 0.6400162769994557 10 54.546753043459795 28.19990155703612 4.885292025195096 12.368053374308989 11 35.71099009165061 21.004042875096292 19.817075572615046 23.467891460638057 12 31.99851890265895 14.563701400637175 28.66577586174415 24.772003834959722 13 26.564939987127744 18.312275193640463 26.966315996433583 28.156468822798214 14 28.85019371753035 16.007531537542768 31.105818650523027 24.036456094403857 15 33.230597333682255 16.76709059253142 27.674701151618265 22.327610922168063 16 32.325531768407615 27.43075167745235 21.262412839099873 18.98130371504016 17 33.744425761365896 19.191479785453254 21.420387421359518 25.64370703182133 18 33.53736670894622 19.13626403814134 25.77153902249631 21.554830230416137 19 33.54421729794274 21.132970960010713 23.278643939609317 22.044167802437233 20 33.892329977800664 23.282617281227296 21.405864172686904 21.41918856828513 21 34.597940644441756 19.910791630087378 24.52325894849624 20.96800877697462 22 31.659449000276425 18.395955138232896 25.686317695379657 24.258278166111026 23 32.302239765819465 20.769478707855605 23.45302568251562 23.47525584380931 24 32.739067573182275 20.260411439524542 22.401151995045655 24.59936899224753 25 28.082037173351072 18.698066112979227 21.960761881404657 31.25913483226504 26 27.69391705375349 19.044911433872805 25.413321723868513 27.84784978850519 27 26.161680065847857 18.036264962970854 24.105818307993577 31.69623666318771 28 25.813909915439755 24.663867287649722 21.77829644348247 27.74392635342805 29 32.27394683326386 21.166949881433432 21.349826354695413 25.2092769306073 30 29.837740374323037 20.367451892595096 24.462699741767047 25.33210799131482 31 34.47839786645257 18.784760316730132 22.370838138736072 24.36600367808123 32 36.120038760632546 17.930320604139744 23.685568926002336 22.26407170922538 33 36.15093491700683 18.041060375268415 23.91715308702954 21.890851620695216 34 29.15018100968776 20.83709402125121 27.665247338803074 22.347477630257956 35 26.869859703362646 27.404102886255906 25.868166580292158 19.857870830089293 36 29.83332174442028 28.022539807916335 20.928686396134623 21.21545205152876 37 31.427214033294547 27.108671235781173 19.638035429191113 21.826079301733163 38 31.664552689078825 25.958765619771075 19.603439954758713 22.77324173639139 39 30.831486814157564 23.15574437301183 19.503524114244534 26.50924469858607 40 28.207539963767235 23.10535829094246 20.636680040158154 28.050421705132152 41 24.474996549015792 24.341204545913847 20.81736432494125 30.366434580129116 42 25.07969803973821 21.496600223945755 22.594064581187528 30.829637155128502 43 26.110095130704096 19.108587658595415 24.954572031716857 29.82674517898363 44 26.80772486116425 20.33641872444088 23.144338142332632 29.711518272062236 45 27.93238605672219 20.274009858682625 22.133636494731725 29.659967589863456 46 25.576982294995265 22.233004288126182 24.63393021373495 27.5560832031436 47 27.70720719640673 20.22259618826378 25.376534060957223 26.693662554372267 48 27.898578400024387 20.269180193440082 26.188431615879253 25.643809790656274 49 29.56988234455928 19.47132634596091 24.614645805709763 26.34414550377005 50 25.934754305338288 20.41444693311119 25.097030029899397 28.553768731651125 51 24.38854211587977 21.774254595974526 26.265466489145073 27.571736799000636 52 25.082643793006714 20.97489361891612 25.76732591026345 28.175136677813718 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 4.0 6 8.0 7 6.5 8 5.0 9 40.0 10 75.0 11 309.5 12 544.0 13 869.0 14 1824.5 15 2455.0 16 2594.5 17 2734.0 18 3182.0 19 3630.0 20 3906.0 21 4182.0 22 4416.5 23 4651.0 24 4102.5 25 3554.0 26 5724.5 27 7895.0 28 9414.0 29 10933.0 30 11601.5 31 12270.0 32 15330.5 33 18391.0 34 20633.5 35 22876.0 36 25827.5 37 28779.0 38 35273.0 39 39369.5 40 36972.0 41 46648.0 42 56324.0 43 58198.5 44 60073.0 45 70186.5 46 80300.0 47 88210.0 48 96120.0 49 110484.5 50 124849.0 51 125316.0 52 125783.0 53 137009.0 54 148235.0 55 181171.5 56 214108.0 57 244502.5 58 274897.0 59 293993.5 60 313090.0 61 303209.5 62 293329.0 63 304159.0 64 266799.0 65 218609.0 66 179747.5 67 140886.0 68 113917.5 69 86949.0 70 74591.0 71 62233.0 72 54427.5 73 46622.0 74 39777.0 75 32932.0 76 24530.5 77 16129.0 78 11044.0 79 5959.0 80 4630.5 81 3302.0 82 1909.5 83 517.0 84 364.0 85 211.0 86 132.0 87 53.0 88 36.0 89 15.5 90 12.0 91 9.0 92 6.0 93 6.0 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2919457.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.105812657784512 #Duplication Level Percentage of deduplicated Percentage of total 1 69.56574677038435 5.638869107196135 2 10.399879516583558 1.6859895004991374 3 4.449404481479946 1.0819811749674983 4 2.260455024965451 0.7329129981487023 5 1.3431157193557643 0.5443522199411651 6 0.8198292309282205 0.3987229294367828 7 0.5690439138042446 0.3228794351544779 8 0.3880493133009828 0.2516364028479755 9 0.29146037148309123 0.21262708515691953 >10 3.968512259680131 8.608529335475911 >50 2.887288607355793 17.08419868432294 >100 2.8533033706237227 41.080414903283476 >500 0.13933947037076883 7.7476602547104285 >1k 0.05728939896777255 8.34898929094215 >5k 0.004855033810828182 2.7376606286295644 >10k+ 0.002427516905414091 3.5225760492867435 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGGACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 32043 1.0975671160767226 No Hit AGGACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 18059 0.6185739334403624 No Hit AGGACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 14935 0.5115677333147911 No Hit AGGACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 12517 0.4287441123469193 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAGGACTGGGAAG 11956 0.4095282102116935 No Hit AGGACTGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 9361 0.32064181798190555 No Hit AGGACTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 8630 0.29560291519964155 No Hit AGGACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 8392 0.2874507142937882 No Hit AGGACTGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTC 7285 0.24953270419807522 No Hit AGGACTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 7017 0.2403529149427445 No Hit AGGACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6227 0.21329308840650846 No Hit AGGACTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 5934 0.20325697552661331 No Hit AGGACTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 5862 0.20079076348786776 No Hit AGGACTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5525 0.18924752102873926 No Hit AGGACTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 5332 0.18263670264710186 No Hit AGGACTGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGAA 4809 0.16472241242121394 No Hit AGGACTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4482 0.15352169941191118 No Hit AGGACTGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 4315 0.14780145759982077 No Hit AGGACTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 4299 0.14725341048009954 No Hit AGGACTGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 4075 0.13958075080400226 No Hit AGGACTGGGGGGCTGATGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3764 0.12892808491442073 No Hit AGGACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 3725 0.12759222006010024 No Hit AGGACTGGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGA 3620 0.1239956608369296 No Hit AGGACTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 3450 0.11817266018989148 No Hit AGGACTGGGCATATATCTCCTAACCTTTGACGACTCTGTATTTCATTTTTGA 3444 0.117967142519996 No Hit AGGACTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 3331 0.11409655973696478 No Hit AGGACTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 3295 0.11286345371759199 No Hit AGGACTGGGGGGGCTGGAGAGTTGGCTCAGCAGTTAGGAACACTGACTGCTC 3169 0.10854758264978728 No Hit AGGACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 2991 0.10245055844288853 No Hit AGGACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 2951 0.10108044064358543 No Hit AGGACTGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTC 2949 0.10101193475362027 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.425294498257724E-4 0.0 0.0 0.0 0.0 8 5.480471197212358E-4 0.0 0.0 0.0 0.0 9 0.0011303471844250489 0.0 0.0 0.0 0.0 10 0.010960942394424716 0.0 0.0 0.0 0.0 11 0.01921590213522583 0.0 0.0 0.0 0.0 12 0.025484191067037466 0.0 0.0 0.0 0.0 13 0.03257455067843096 0.0 0.0 0.0 0.0 14 0.048502170095329374 0.0 0.0 0.0 0.0 15 0.05610632388146152 0.0 0.0 0.0 0.0 16 0.06614243676135664 0.0 0.0 0.0 0.0 17 0.07124612556376066 0.0 0.0 0.0 0.0 18 0.07634981436616467 0.0 0.0 0.0 0.0 19 0.08453626821700062 0.0 0.0 0.0 0.0 20 0.09172938666334185 0.0 0.0 0.0 0.0 21 0.09806618148511864 0.0 0.0 0.0 0.0 22 0.10402619391208708 0.0 0.0 0.0 0.0 23 0.11207563598299272 0.0 0.0 0.0 0.0 24 0.12067312517361961 0.0 0.0 0.0 0.0 25 0.1267358964355358 0.0 0.0 0.0 0.0 26 0.13557315624104072 0.0 0.0 0.0 0.0 27 0.14321156297215543 0.0 0.0 0.0 0.0 28 0.17852634924919258 0.0 0.0 0.0 0.0 29 0.18832269151420966 0.0 0.0 0.0 0.0 30 0.20198961656225797 0.0 0.0 0.0 0.0 31 0.20846342316396507 0.0 0.0 0.0 0.0 32 0.21514274743556763 0.0 0.0 0.0 0.0 33 0.2204862068528497 0.0 0.0 0.0 0.0 34 0.23045381384277966 0.0 0.0 0.0 0.0 35 0.27354401863086186 0.0 0.0 0.0 0.0 36 0.2876562319636837 0.0 0.0 0.0 0.0 37 0.2982746449082826 0.0 0.0 0.0 0.0 38 0.30680362820894436 0.0 0.0 0.0 0.0 39 0.3146132996649719 0.0 0.0 0.0 0.0 40 0.3231422829656337 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 40 5.6170393E-9 46.0 14 CGTATAG 20 6.313061E-4 46.0 25 TAACGTT 20 6.313061E-4 46.0 30 ATATGCG 20 6.313061E-4 46.0 14 ACGATTT 50 1.6370905E-11 46.0 39 CTAACGT 20 6.313061E-4 46.0 27 ATTTTCG 30 1.862396E-6 46.0 10 CGTACTC 25 3.418458E-5 46.0 13 GTATCGC 20 6.313061E-4 46.0 18 TATACGC 30 1.862396E-6 46.0 32 CGATCAA 40 5.6170393E-9 46.0 10 TATAACG 20 6.313061E-4 46.0 42 CGATAGC 20 6.313061E-4 46.0 41 TAATGCG 20 6.313061E-4 46.0 40 TAATCGA 55 1.8189894E-12 46.0 36 TGGGATA 2720 0.0 43.71691 6 ACTGGGC 36980 0.0 43.064358 4 AGGACTG 316420 0.0 42.255104 1 CTGGGAT 24055 0.0 42.118065 5 GACTGGG 308480 0.0 42.07297 3 >>END_MODULE