##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527296_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 489202 Sequences flagged as poor quality 0 Sequence length 52 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.12624641763525 31.0 31.0 33.0 28.0 33.0 2 31.119331073871326 31.0 31.0 34.0 28.0 34.0 3 32.12271413444753 33.0 31.0 34.0 30.0 34.0 4 35.945445848545184 37.0 35.0 37.0 35.0 37.0 5 36.003021246846906 37.0 35.0 37.0 35.0 37.0 6 33.10272852523089 35.0 33.0 35.0 28.0 35.0 7 35.275434278682425 35.0 35.0 36.0 35.0 37.0 8 36.27438563211107 37.0 35.0 37.0 35.0 37.0 9 38.44840168274046 39.0 39.0 39.0 37.0 39.0 10 37.38270898320121 39.0 37.0 39.0 34.0 39.0 11 37.38750045993271 39.0 37.0 39.0 34.0 39.0 12 37.152658819874 39.0 37.0 39.0 34.0 39.0 13 36.91005760401634 39.0 37.0 39.0 33.0 39.0 14 37.93132693652111 40.0 38.0 40.0 33.0 40.0 15 37.87223069406912 40.0 38.0 40.0 33.0 40.0 16 32.49172938786023 39.0 32.0 40.0 8.0 40.0 17 34.6545394336082 39.0 34.0 40.0 17.0 40.0 18 36.7003528194897 40.0 34.0 40.0 31.0 40.0 19 36.70993577295268 39.0 36.0 40.0 31.0 40.0 20 37.6084480439573 39.0 37.0 40.0 32.0 40.0 21 37.935073854971975 40.0 38.0 40.0 33.0 40.0 22 38.048063989926455 40.0 38.0 40.0 33.0 40.0 23 38.039439740638834 40.0 38.0 40.0 33.0 40.0 24 37.70117456592573 39.0 38.0 40.0 33.0 40.0 25 36.819961897130426 38.0 36.0 40.0 32.0 40.0 26 35.88566890568722 37.0 35.0 40.0 31.0 40.0 27 35.43539682993937 35.0 35.0 40.0 30.0 40.0 28 35.369550819497874 35.0 35.0 40.0 30.0 40.0 29 34.993487352872634 35.0 35.0 39.0 30.0 40.0 30 34.362424928761534 35.0 34.0 39.0 25.0 40.0 31 34.035502716669185 35.0 34.0 39.0 25.0 40.0 32 33.0141005147158 35.0 33.0 38.0 20.0 40.0 33 32.69171426118454 35.0 33.0 38.0 19.0 40.0 34 32.23662004652475 35.0 33.0 38.0 16.0 40.0 35 32.37666444536204 35.0 33.0 38.0 16.0 40.0 36 31.811051467491957 35.0 31.0 38.0 15.0 40.0 37 30.474039353886532 35.0 25.0 38.0 10.0 40.0 38 30.233063233592667 35.0 25.0 38.0 10.0 40.0 39 29.386124750103228 35.0 23.0 38.0 9.0 40.0 40 28.848447062767526 35.0 19.0 37.0 8.0 40.0 41 28.410028985981253 35.0 18.0 37.0 8.0 40.0 42 28.13390174202068 35.0 16.0 36.0 8.0 40.0 43 28.26303449290886 35.0 17.0 36.0 8.0 40.0 44 27.877843917236643 35.0 15.0 35.0 8.0 40.0 45 27.482242509229316 35.0 15.0 35.0 8.0 40.0 46 27.06420865000552 34.0 14.0 35.0 8.0 40.0 47 26.873275252349746 34.0 13.0 35.0 8.0 40.0 48 26.9991373706567 34.0 13.0 35.0 8.0 39.0 49 26.93533346143311 34.0 13.0 35.0 8.0 39.0 50 26.057926991304207 33.0 10.0 35.0 8.0 39.0 51 26.05852592589564 33.0 10.0 35.0 8.0 39.0 52 25.562822719449226 33.0 10.0 35.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 11.0 16 47.0 17 117.0 18 316.0 19 588.0 20 1107.0 21 2039.0 22 3541.0 23 5900.0 24 9198.0 25 13398.0 26 19250.0 27 25734.0 28 29517.0 29 27898.0 30 22770.0 31 19705.0 32 19993.0 33 23931.0 34 32656.0 35 51598.0 36 96363.0 37 49769.0 38 31313.0 39 2441.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.56500586669719 0.17947596289467335 0.0932130285648873 0.16230514184324676 8 98.30213286127203 0.8959489127190813 0.35097975887261296 0.450938467136275 9 94.80194275575325 3.1308130383767847 0.7078875392986946 1.3593566665712733 10 33.93526600463612 47.3256446212403 10.564756480962874 8.174332893160699 11 18.041218147104875 65.31964301045376 9.272652196843021 7.366486645598341 12 35.43771284663595 51.01880204905132 6.465427369471098 7.07805773484164 13 14.967641178899513 53.38367381981267 7.8219222325338 23.826762768754012 14 15.624833913189235 70.87563010780823 6.572949415578841 6.926586563423697 15 29.18201479143585 54.73546714853986 7.806386727772985 8.2761313322513 16 14.883831219005646 58.055976876627646 21.66998499597303 5.39020690839367 17 31.040347341180123 54.025739878414235 7.209905110772237 7.724007669633402 18 26.78361903671694 55.14450063572921 9.535733705095236 8.536146622458617 19 14.403661473174681 54.71809191295212 23.165072914665107 7.713173699208098 20 11.23564498918647 66.79735569355807 9.953761431882944 12.013237885372504 21 11.281229430787281 54.53146144128601 24.259712756693556 9.92759637123315 22 10.539000249385735 57.15553084410938 7.447843631056291 24.857625275448587 23 10.811689240845295 72.99602209312309 7.514891598971387 8.677397067060234 24 11.29778700822973 71.4214169198 8.855237713664293 8.425558358305976 25 12.168797347516977 58.55086446907413 8.65879534425452 20.621542839154376 26 27.840442189524982 56.273277705324176 8.914109100126328 6.972171005024509 27 15.076389712225216 56.431494556440896 9.94170097423968 18.550414757094206 28 18.774453088908057 67.50013286944862 7.344818704747732 6.380595336895597 29 30.738835900098525 54.882441200158624 8.172697576870085 6.20602532287276 30 19.05123037109415 66.73071655471564 8.310677388890479 5.9073756852997334 31 29.711039611448847 54.85586731043618 9.516109909607891 5.9169831685070795 32 17.493591604286163 55.89879027477402 19.838226335951205 6.769391784988614 33 27.239463452725047 55.61772028732507 8.588476743758203 8.554339516191675 34 15.387099807441507 57.75180804657381 9.24178560185772 17.619306544126967 35 14.32107800049877 69.56124463922878 8.831116798377767 7.286560561894677 36 24.88256384888042 58.21950850568886 9.542479384794012 7.3554482606367095 37 15.841717736231658 58.12956610970519 17.56983822633595 8.458877927727197 38 25.59126904632442 56.39490435443846 9.077231900114882 8.936594699122244 39 17.12114831909927 53.9807686804224 9.798815213347451 19.099267787130877 40 17.910801672928564 53.21257885290739 19.43757384475125 9.439045629412798 41 18.108470529556296 53.037804424348224 10.334994542131879 18.5187305039636 42 18.224373571653427 62.24770135853901 10.07518366646089 9.452741403346675 43 17.755037796247766 64.00157808022044 9.517131982289524 8.726252141242268 44 18.082101054370177 63.55084402762049 10.037571391776812 8.329483526232517 45 25.984358199680297 55.21625013797981 9.712961108090319 9.086430554249574 46 18.20842923781996 55.62139974897895 16.850299058466646 9.319871954734445 47 26.073687352054982 53.94438289295629 9.962755671481311 10.019174083507426 48 25.904432115976633 54.70337406633661 9.957236479000494 9.434957338686269 49 26.09228907486069 54.447447066855815 9.428007244451168 10.032256613832322 50 17.896697069922034 60.347872657920455 10.923912821288548 10.831517450868965 51 16.233580402369576 62.02754690291536 11.900401061320274 9.838471633394793 52 23.857629363739314 53.83195489797671 11.778161168597022 10.532254569686959 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.0 4 10.0 5 206.0 6 402.0 7 1091.5 8 1781.0 9 31758.0 10 61735.0 11 47251.0 12 32767.0 13 22892.0 14 9567.0 15 6117.0 16 5883.5 17 5650.0 18 5639.0 19 5628.0 20 6207.5 21 6787.0 22 8028.0 23 9269.0 24 10934.0 25 12599.0 26 13598.5 27 14598.0 28 15567.5 29 16537.0 30 18298.5 31 20060.0 32 20025.5 33 19991.0 34 18832.0 35 17673.0 36 17302.0 37 16931.0 38 16142.0 39 13704.5 40 12056.0 41 11966.0 42 11876.0 43 12720.0 44 13564.0 45 12320.0 46 11076.0 47 11064.0 48 11052.0 49 13669.5 50 16287.0 51 30812.0 52 45337.0 53 41317.5 54 37298.0 55 31572.5 56 25847.0 57 19878.0 58 13909.0 59 10575.5 60 7242.0 61 5115.0 62 2988.0 63 2148.5 64 1060.0 65 811.0 66 663.5 67 516.0 68 472.5 69 429.0 70 454.0 71 479.0 72 288.0 73 97.0 74 84.0 75 71.0 76 45.5 77 20.0 78 18.0 79 16.0 80 11.0 81 6.0 82 5.5 83 5.0 84 3.5 85 2.0 86 3.0 87 4.0 88 2.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 489202.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.985276969883515 #Duplication Level Percentage of deduplicated Percentage of total 1 84.02201990694992 31.075776778276087 2 7.313555411717412 5.409877450739178 3 2.7959739780930013 3.1022961594107 4 1.497327767430131 2.215163287724029 5 0.8975145711478328 1.659741249920441 6 0.598641880171496 1.3284561446348755 7 0.4688635067781875 1.2138732661483485 8 0.3351673906817924 0.9917007020511397 9 0.2504704364060661 0.8337346616921353 >10 1.508899800074932 10.456220045761635 >50 0.15198309782887193 3.8952317212079284 >100 0.1373693384222496 10.200417818633028 >500 0.012860108277827622 3.4124625346920094 >1k 0.007014604515178704 4.838934139095068 >5k 0.0 0.0 >10k+ 0.0023382015050595678 19.366114040013397 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 43343 8.859939247999804 No Hit CAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15962 3.2628648288437088 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 15678 3.204811100526981 No Hit CAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14593 2.9830213286127205 No Hit CAAAGTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4048 0.8274700430497014 No Hit CAAAGTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3540 0.7236274585958357 No Hit CAAAGTGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2879 0.5885094500840145 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAA 1759 0.3595651693983262 No Hit CAAAGTGGGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1443 0.2949701759191499 No Hit CAAAGTGGGAAGCAGAGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 1406 0.28740683807506917 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAA 1379 0.2818876455942535 No Hit CAAAGTGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1332 0.27228016238690766 No Hit CAAAGTGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 1275 0.26062853381629675 Illumina Single End Adapter 2 (97% over 34bp) CAAAGTGGGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAA 1124 0.22976193883099413 No Hit CAAAGTGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1111 0.22710454985874956 No Hit CAAAGTGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 1086 0.22199418645058688 Illumina Single End Adapter 2 (97% over 34bp) CAAAGTGGGGCAGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAA 976 0.1995085874546711 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGAGGGAAG 974 0.19909975838201804 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGGAG 966 0.19746444209140598 No Hit CAAAGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 922 0.18847020249303967 No Hit CAAAGTGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGG 880 0.17988479196732637 No Hit CAAAGTGGGCAGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAA 861 0.17600091577712274 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 811 0.16578018896079738 Illumina Single End Adapter 2 (100% over 25bp) CAAAGTGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 807 0.16496253081549136 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAAAAA 792 0.16189631277059374 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTCGAGATCGGAAGAGCTCGTA 744 0.15208441502692138 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGGGGGGAG 743 0.15188000049059489 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTCGATCGGAAGAGCTCGTATG 651 0.1330738631485562 No Hit CAAAGTGGGAGAGTGCAGTGCTCAAAGTGGGAGAGTGCAGTGCTCAAAGTGG 615 0.12571493984080195 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAA 605 0.12367079447753689 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGGATCGGAAGAGCTCGTATGCCGT 600 0.12264872179590434 Illumina Single End Adapter 2 (95% over 24bp) CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGTAAAAAAAAAAAAAAAAAAAAA 596 0.12183106365059831 No Hit CAAAGTGGGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 574 0.11733394385141517 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAA 570 0.11651628570610914 No Hit CAAAGTGGGGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 537 0.1097706060073344 No Hit CAAAGTGGGGCAGAGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAA 533 0.10895294786202837 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGCGGGAAG 514 0.10506907167182472 No Hit CAAAGTGGGAAGCAGGGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 513 0.10486465713549822 No Hit CAAAGTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 500 0.10220726816325362 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.004088290726530145 0.0 0.0 0.0 0.0 8 0.026982718795098958 0.0 0.0 0.0 0.0 9 0.04701534335509667 0.0 0.0 0.0 0.0 10 0.254700512262828 0.0 0.0 0.0 0.0 11 0.48528010923912823 0.0 0.0 0.0 0.0 12 0.677020944313392 0.0 0.0 0.0 0.0 13 0.7824988450578697 0.0 0.0 0.0 0.0 14 0.9476657904096876 0.0 0.0 0.0 0.0 15 1.0555966655900835 0.0 0.0 0.0 0.0 16 1.1819248490398648 0.0 0.0 0.0 0.0 17 1.2737069758504667 0.0 0.0 0.0 0.0 18 1.3650802735884153 0.0 0.0 0.0 0.0 19 1.4603374475165678 0.0 0.0 0.0 0.0 20 1.578080220440636 0.0 0.0 0.0 0.0 21 1.6751771251957268 0.0 0.0 0.0 0.0 22 1.7963949452373458 0.0 0.0 0.0 0.0 23 1.9441866550014104 0.0 0.0 0.0 0.0 24 2.092796022910781 0.0 0.0 0.0 0.0 25 2.2324111512217857 0.0 0.0 0.0 0.0 26 2.37263952314177 0.0 0.0 0.0 0.0 27 2.513481138670733 0.0 0.0 0.0 0.0 28 2.841362054938451 0.0 0.0 0.0 0.0 29 2.9480664429008874 0.0 0.0 0.0 0.0 30 3.0966758108102583 0.0 0.0 0.0 0.0 31 3.175170992759637 0.0 0.0 0.0 0.0 32 3.251622029345751 0.0 0.0 0.0 0.0 33 3.3256200914959466 0.0 0.0 0.0 0.0 34 3.4251699706869556 0.0 0.0 0.0 0.0 35 3.8417667957203774 0.0 0.0 0.0 0.0 36 3.929869460877102 0.0 0.0 0.0 0.0 37 4.002436621273012 0.0 0.0 0.0 0.0 38 4.079705316004432 0.0 0.0 0.0 0.0 39 4.1524768909366685 0.0 0.0 0.0 0.0 40 4.225044051332579 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATGTA 55 1.8189894E-12 46.000004 16 TTCATCG 35 1.01796104E-7 46.000004 35 CCAACAG 55 1.8189894E-12 46.000004 24 TTACTGG 55 1.8189894E-12 46.000004 32 AGGATTA 35 1.01796104E-7 46.000004 42 TTATCGA 55 1.8189894E-12 46.000004 44 TTACACC 35 1.01796104E-7 46.000004 46 GGATTAC 35 1.01796104E-7 46.000004 43 CAACAGG 55 1.8189894E-12 46.000004 25 CTGACGC 35 1.01796104E-7 46.000004 20 GCAATGT 55 1.8189894E-12 46.000004 15 GATTGCG 35 1.01796104E-7 46.000004 40 GCGTGCG 35 1.01796104E-7 46.000004 22 ATTACAC 35 1.01796104E-7 46.000004 45 GGTTACT 55 1.8189894E-12 46.000004 30 TCTCGTT 35 1.01796104E-7 46.000004 44 ATTGCGC 35 1.01796104E-7 46.000004 41 CGGGAGT 35 1.01796104E-7 46.000004 17 GTCTCGT 35 1.01796104E-7 46.000004 43 TCGTTGC 35 1.01796104E-7 46.000004 46 >>END_MODULE