##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527295_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 487005 Sequences flagged as poor quality 0 Sequence length 52 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14670280592602 31.0 31.0 33.0 28.0 33.0 2 31.19173109105656 31.0 31.0 34.0 28.0 34.0 3 32.13870904816172 33.0 31.0 34.0 30.0 34.0 4 35.971437664911036 37.0 35.0 37.0 35.0 37.0 5 36.03593392264966 37.0 35.0 37.0 35.0 37.0 6 33.14093079126498 35.0 33.0 35.0 28.0 35.0 7 35.3045143273683 35.0 35.0 36.0 35.0 37.0 8 36.31888994979518 37.0 35.0 37.0 35.0 37.0 9 38.39336557119537 39.0 39.0 39.0 37.0 39.0 10 37.3958460385417 39.0 37.0 39.0 34.0 39.0 11 37.327657826921694 39.0 37.0 39.0 34.0 39.0 12 37.12589193129434 39.0 37.0 39.0 33.0 39.0 13 36.829576698391186 39.0 37.0 39.0 33.0 39.0 14 37.86127452490221 40.0 38.0 40.0 33.0 40.0 15 37.946860915185674 40.0 38.0 40.0 33.0 40.0 16 37.43162801203273 40.0 37.0 40.0 32.0 40.0 17 37.879861603063624 40.0 38.0 40.0 33.0 40.0 18 37.98509666225193 40.0 38.0 40.0 34.0 40.0 19 37.20596297779284 40.0 37.0 40.0 32.0 40.0 20 37.82202030779971 40.0 38.0 40.0 33.0 40.0 21 33.736374369873 40.0 34.0 40.0 10.0 40.0 22 34.70253282820505 40.0 34.0 40.0 18.0 40.0 23 36.67413270910976 40.0 34.0 40.0 30.0 40.0 24 37.12076672724099 39.0 37.0 40.0 32.0 40.0 25 36.564786809170336 37.0 36.0 40.0 32.0 40.0 26 35.77640681307174 37.0 35.0 40.0 31.0 40.0 27 35.395710516319134 35.0 35.0 40.0 30.0 40.0 28 35.344891736224476 35.0 35.0 40.0 30.0 40.0 29 35.18940051950185 35.0 35.0 40.0 30.0 40.0 30 34.518896109896204 35.0 35.0 39.0 26.0 40.0 31 34.069615301690945 35.0 34.0 39.0 25.0 40.0 32 33.06262358702683 35.0 33.0 38.0 20.0 40.0 33 32.75657539450314 35.0 33.0 38.0 19.0 40.0 34 32.265305284339995 35.0 33.0 38.0 16.0 40.0 35 32.42142277800023 35.0 33.0 38.0 17.0 40.0 36 31.799012330468887 35.0 31.0 38.0 15.0 40.0 37 30.635761439820946 35.0 27.0 38.0 10.0 40.0 38 30.347865011652857 35.0 25.0 38.0 10.0 40.0 39 29.74635784026858 35.0 24.0 38.0 9.0 40.0 40 25.47901150912208 33.0 10.0 35.0 6.0 40.0 41 25.927811829447336 33.0 12.0 35.0 8.0 40.0 42 27.004788451863945 33.0 15.0 35.0 8.0 40.0 43 27.85202615989569 34.0 16.0 35.0 8.0 39.0 44 27.80795885052515 35.0 15.0 35.0 8.0 40.0 45 27.54072956129814 35.0 15.0 35.0 8.0 40.0 46 27.158546626831345 35.0 14.0 35.0 8.0 40.0 47 27.153840309647745 35.0 14.0 35.0 8.0 40.0 48 27.18198786460098 34.0 14.0 35.0 8.0 40.0 49 27.0487633597191 34.0 13.0 35.0 8.0 39.0 50 26.47053521011078 33.0 11.0 35.0 8.0 39.0 51 26.251576472520817 33.0 10.0 35.0 8.0 39.0 52 25.709124136302503 33.0 10.0 35.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 3.0 15 12.0 16 55.0 17 147.0 18 343.0 19 677.0 20 1240.0 21 2137.0 22 3516.0 23 6005.0 24 9028.0 25 13537.0 26 19044.0 27 25702.0 28 30244.0 29 28186.0 30 22642.0 31 20451.0 32 21319.0 33 26213.0 34 41088.0 35 42411.0 36 91122.0 37 46220.0 38 33107.0 39 2553.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.57556903933225 0.17556287923121938 0.09630291270110163 0.15256516873543394 8 98.29036662867938 0.9248365006519441 0.3295654048726399 0.455231465796039 9 94.79183991950802 3.1297419944353755 0.7057422408394165 1.372675845217195 10 33.862896684838965 47.373024917608646 10.624531575651174 8.139546821901213 11 18.092216712354084 65.03834662888471 9.458219114793483 7.411217543967721 12 35.30107493762898 51.083253765361746 6.4405909590250605 7.175080337984209 13 15.198406587201363 53.265572222051105 7.819221568567059 23.71679962218047 14 15.595527766655373 70.7239145388651 6.634223467931541 7.046334226547982 15 29.032556133920593 54.895945626841616 7.760905945524173 8.310592293713617 16 13.752014866377142 56.248909148776704 24.196260818677427 5.802815166168726 17 30.942187451874208 54.17870453075431 7.192944630958614 7.686163386412871 18 26.72375026950442 55.246250038500634 9.50092914857137 8.529070543423579 19 14.335376433506845 54.80539214176445 23.117832465785774 7.741398958942927 20 11.3306844898923 66.70978737384627 9.960267348384514 11.99926078787692 21 18.638617673329843 48.46623751296188 23.056642128930914 9.838502684777364 22 10.721861171856553 57.23000790546299 7.452284884138767 24.595846038541698 23 11.038490364575312 72.84771203581072 7.42805515343785 8.685742446176118 24 11.607478362645148 71.06785351279761 8.948368086569953 8.37630003798729 25 12.431289206476318 58.50001540025257 8.678144988244474 20.39055040502664 26 27.677949918378665 56.265130748144266 8.947136066364822 7.109783267112248 27 15.139885627457625 56.45321916612765 9.984702415786286 18.422192790628433 28 18.81808194987731 67.35680331824109 7.33852835186497 6.4865863800166315 29 30.338908224761553 55.189782445765445 8.151867023952526 6.319442305520477 30 19.185018634305603 66.68494163304278 8.238519111713433 5.891520620938183 31 29.58101046190491 54.878081333867215 9.587170562930565 5.953737641297317 32 17.556903933224504 56.00414780135728 19.73408897239248 6.704859293025739 33 27.08699089331732 55.63864847383498 8.654120594244413 8.6202400386033 34 15.39943121733863 57.86573033131077 9.293333744006734 17.441504707343867 35 14.482808184720897 69.48943029332348 8.709150830073613 7.3186106918820135 36 24.74594716686687 58.284822537756284 9.563146168930505 7.4060841264463395 37 15.840289114074805 58.3521729756368 17.472715885873864 8.334822024414535 38 25.59809447541606 56.46102196076016 9.010174433527377 8.930709130296403 39 16.72508495805998 54.496976417079914 9.653288980605948 19.124649644254166 40 20.099588299914785 52.19761604090307 18.532663935688547 9.170131723493599 41 18.151353682200387 53.15284237328159 10.263344318846828 18.432459625671193 42 18.13923881684993 62.44514943378405 10.018582971427398 9.397028777938624 43 17.72836007843862 64.22131189618176 9.449594973357563 8.600733052022052 44 17.92158191394339 63.807147770556774 10.0107801767949 8.260490138704942 45 26.01862403876757 55.34481165491114 9.601749468691287 9.034814837630003 46 18.045194607858235 55.77273333949343 16.871490025769756 9.310582026878574 47 25.878584408784306 54.405806921900194 9.743021118879684 9.972587550435827 48 25.845114526544904 54.80785618217472 9.810987566862764 9.536041724417615 49 25.980636749109355 54.681368774447904 9.3921006971181 9.945893779324647 50 17.71706655989158 61.13900267964395 10.749170953070298 10.394759807394175 51 16.222626051067238 62.08806891099681 11.860247841397932 9.829057196538022 52 23.78209669305243 54.029835422634264 11.748750012833543 10.439317871479759 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 4.0 4 8.0 5 187.5 6 367.0 7 1004.5 8 1642.0 9 29348.5 10 57055.0 11 44572.5 12 32090.0 13 23930.5 14 11649.5 15 7528.0 16 6767.0 17 6006.0 18 5743.5 19 5481.0 20 6057.5 21 6634.0 22 7879.5 23 9125.0 24 10643.0 25 12161.0 26 13359.0 27 14557.0 28 15517.0 29 16477.0 30 18071.5 31 19666.0 32 19687.5 33 19709.0 34 18793.5 35 17878.0 36 17481.0 37 17084.0 38 16440.0 39 14175.5 40 12555.0 41 12309.5 42 12064.0 43 12857.0 44 13650.0 45 12483.5 46 11317.0 47 11114.5 48 10912.0 49 13483.0 50 16054.0 51 29832.5 52 43611.0 53 39864.0 54 36117.0 55 31299.0 56 26481.0 57 20559.5 58 14638.0 59 11029.5 60 7421.0 61 5356.0 62 3291.0 63 2350.0 64 1137.0 65 865.0 66 701.5 67 538.0 68 462.5 69 387.0 70 422.5 71 458.0 72 274.0 73 90.0 74 79.0 75 68.0 76 43.0 77 18.0 78 16.0 79 14.0 80 10.0 81 6.0 82 4.0 83 2.0 84 2.0 85 2.0 86 1.5 87 1.0 88 0.5 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 487005.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.812648398609134 #Duplication Level Percentage of deduplicated Percentage of total 1 84.15594518214141 31.821591658249375 2 7.279576287212159 5.505201172784117 3 2.817658308629597 3.19629368794892 4 1.4546055571727596 2.2000995396814598 5 0.885503945795168 1.6741624678966867 6 0.6155988597571749 1.3966453943149653 7 0.4235626210597307 1.121121712544744 8 0.33816172489726903 1.02294323243261 9 0.26002185555635493 0.8848903500095741 >10 1.4769665896816735 10.524322225386614 >50 0.141751272363316 3.7452656931474246 >100 0.12692373341317836 9.634079260253118 >500 0.01423443739213215 3.7098314428769283 >1k 0.007117218696066075 4.781381112449287 >5k 0.0 0.0 >10k+ 0.0023724062320220254 18.782171050024175 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 39712 8.15433106436279 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 16034 3.292368661512716 No Hit CAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14500 2.977382162400797 No Hit CAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13503 2.772661471648135 No Hit CAAAGTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3747 0.7693966181045369 No Hit CAAAGTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3219 0.6609788400529768 No Hit CAAAGTGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2720 0.5585158263262184 No Hit CAAAGTGGGAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1939 0.3981478629582858 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAA 1669 0.3427069537273745 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAA 1378 0.2829539737785033 No Hit CAAAGTGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 1212 0.24886808143653555 Illumina Single End Adapter 2 (97% over 34bp) CAAAGTGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1208 0.24804673463311466 No Hit CAAAGTGGGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAA 1089 0.2236116672313426 No Hit CAAAGTGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 1075 0.22073695341936944 Illumina Single End Adapter 2 (97% over 34bp) CAAAGTGGGGCAGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAA 1055 0.21663021940226487 No Hit CAAAGTGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1009 0.2071847311629244 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGGAG 931 0.19116846849621666 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGAGGGAAG 915 0.18788308128253303 No Hit CAAAGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 869 0.17843759304319257 No Hit CAAAGTGGGCAGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAA 868 0.17823225634233736 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGGGGGGAG 868 0.17823225634233736 No Hit CAAAGTGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGG 863 0.1772055728380612 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 749 0.1537971889405653 Illumina Single End Adapter 2 (100% over 25bp) CAAAGTGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 747 0.15338651553885482 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAAAAA 733 0.15051180172688167 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTCGATCGGAAGAGCTCGTATG 725 0.14886910812003984 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTCGAGATCGGAAGAGCTCGTA 697 0.14311968049609347 No Hit CAAAGTGGGGAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 693 0.14229833369267256 No Hit CAAAGTGGGTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 676 0.1388076097781337 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAA 651 0.13367419225675303 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGGATCGGAAGAGCTCGTATGCCGT 620 0.12730875453024096 Illumina Single End Adapter 2 (95% over 24bp) CAAAGTGGGAGAGTGCAGTGCTCAAAGTGGGAGAGTGCAGTGCTCAAAGTGG 616 0.12648740772682004 No Hit CAAAGTGGGAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 570 0.1170419194874796 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGCGGGAAG 567 0.11642590938491391 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGTAAAAAAAAAAAAAAAAAAAAA 552 0.1133458588720855 No Hit CAAAGTGGGGCAGAGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAA 543 0.11149782856438846 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAA 540 0.11088181846182277 No Hit CAAAGTGGGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 524 0.10759643124813914 No Hit CAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA 514 0.10554306423958687 No Hit CAAAGTGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 511 0.10492705413702118 Illumina Single End Adapter 2 (100% over 34bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.005544090923091139 0.0 0.0 0.0 0.0 8 0.030595168427428876 0.0 0.0 0.0 0.0 9 0.0540035523249248 0.0 0.0 0.0 0.0 10 0.28418599398363464 0.0 0.0 0.0 0.0 11 0.5065656410098459 0.0 0.0 0.0 0.0 12 0.7160090758821778 0.0 0.0 0.0 0.0 13 0.8221681502243303 0.0 0.0 0.0 0.0 14 0.9716532684469359 0.0 0.0 0.0 0.0 15 1.0813030667036272 0.0 0.0 0.0 0.0 16 1.1907475282594635 0.0 0.0 0.0 0.0 17 1.2763729325160933 0.0 0.0 0.0 0.0 18 1.3605609798667364 0.0 0.0 0.0 0.0 19 1.4492664346361948 0.0 0.0 0.0 0.0 20 1.5531668052689398 0.0 0.0 0.0 0.0 21 1.641050913234977 0.0 0.0 0.0 0.0 22 1.7585035061241672 0.0 0.0 0.0 0.0 23 1.9042925637313786 0.0 0.0 0.0 0.0 24 2.0562417223642466 0.0 0.0 0.0 0.0 25 2.201825443270603 0.0 0.0 0.0 0.0 26 2.347409164176959 0.0 0.0 0.0 0.0 27 2.4977156292029856 0.0 0.0 0.0 0.0 28 2.823174300058521 0.0 0.0 0.0 0.0 29 2.916397162246794 0.0 0.0 0.0 0.0 30 3.0515087114095336 0.0 0.0 0.0 0.0 31 3.1239925668114292 0.0 0.0 0.0 0.0 32 3.1977084424184556 0.0 0.0 0.0 0.0 33 3.2650588802989704 0.0 0.0 0.0 0.0 34 3.359924436094085 0.0 0.0 0.0 0.0 35 3.7215223663001407 0.0 0.0 0.0 0.0 36 3.7972916089157196 0.0 0.0 0.0 0.0 37 3.856428578762025 0.0 0.0 0.0 0.0 38 3.921520312933132 0.0 0.0 0.0 0.0 39 3.9993429225572634 0.0 0.0 0.0 0.0 40 4.071826777959158 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGACA 20 6.3078554E-4 46.0 43 TGTTGTT 40 5.6006684E-9 46.0 31 TAGAAGA 25 3.4142362E-5 46.0 18 CGCTGGA 20 6.3078554E-4 46.0 37 CAAGATT 20 6.3078554E-4 46.0 46 CGACAAT 40 5.6006684E-9 46.0 30 GAGAATT 20 6.3078554E-4 46.0 46 TGTGACT 20 6.3078554E-4 46.0 28 TGTTGGT 40 5.6006684E-9 46.0 36 TGTGAAC 20 6.3078554E-4 46.0 26 ACTGTGT 20 6.3078554E-4 46.0 22 ATGGGCG 20 6.3078554E-4 46.0 11 AACGTGC 25 3.4142362E-5 46.0 23 AAGTACG 25 3.4142362E-5 46.0 24 GGTGAAC 25 3.4142362E-5 46.0 9 GGTTGCG 20 6.3078554E-4 46.0 35 GGGTCGC 30 1.8591782E-6 46.0 7 GTGTTGT 40 5.6006684E-9 46.0 30 CATGAAA 20 6.3078554E-4 46.0 39 CCGTGGA 20 6.3078554E-4 46.0 15 >>END_MODULE