##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527288_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 907018 Sequences flagged as poor quality 0 Sequence length 50 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47315929783091 34.0 31.0 34.0 31.0 34.0 2 32.884185319365216 34.0 31.0 34.0 31.0 34.0 3 32.901987612153235 34.0 31.0 34.0 31.0 34.0 4 36.44650933057558 37.0 37.0 37.0 35.0 37.0 5 36.124267655107175 37.0 37.0 37.0 35.0 37.0 6 36.13620236864097 37.0 37.0 37.0 35.0 37.0 7 36.50931183284124 37.0 37.0 37.0 35.0 37.0 8 36.635353432897695 37.0 37.0 37.0 35.0 37.0 9 38.71971118544505 39.0 39.0 39.0 39.0 39.0 10 38.052877671666934 39.0 38.0 39.0 37.0 39.0 11 37.72467249823047 39.0 38.0 39.0 35.0 39.0 12 36.999007737442916 39.0 35.0 39.0 33.0 39.0 13 36.794152927505294 39.0 35.0 39.0 33.0 39.0 14 37.5467146186735 40.0 36.0 40.0 33.0 40.0 15 37.49130557497205 40.0 36.0 40.0 33.0 40.0 16 37.15077650057661 39.0 35.0 40.0 33.0 40.0 17 37.07469201272742 39.0 35.0 40.0 32.0 40.0 18 37.086074366771115 39.0 35.0 40.0 32.0 40.0 19 36.707692680850876 39.0 35.0 40.0 31.0 40.0 20 36.57277694599225 39.0 35.0 40.0 31.0 40.0 21 36.78622915973001 39.0 35.0 40.0 32.0 40.0 22 36.612788279835684 38.0 35.0 40.0 32.0 40.0 23 36.63283859857246 38.0 35.0 40.0 32.0 40.0 24 36.65190547486378 38.0 35.0 40.0 32.0 40.0 25 36.56240449472888 38.0 35.0 40.0 32.0 40.0 26 36.37018339217083 38.0 35.0 40.0 32.0 40.0 27 36.132428463382205 38.0 35.0 40.0 31.0 40.0 28 35.884822572429655 37.0 34.0 40.0 31.0 40.0 29 36.11423036808531 37.0 35.0 40.0 31.0 40.0 30 36.041270404776974 37.0 35.0 40.0 31.0 40.0 31 35.9007814618894 37.0 35.0 40.0 31.0 40.0 32 34.94272550269124 36.0 34.0 40.0 28.0 40.0 33 35.145678476061114 36.0 34.0 40.0 29.0 40.0 34 34.83856549704637 35.0 34.0 40.0 28.0 40.0 35 34.90254107415729 35.0 34.0 40.0 28.0 40.0 36 34.7591348793519 35.0 34.0 39.0 29.0 40.0 37 34.656227329556856 35.0 34.0 39.0 28.0 40.0 38 34.421219865537395 35.0 34.0 39.0 28.0 40.0 39 34.377198688449404 35.0 34.0 39.0 28.0 40.0 40 34.204759993737724 35.0 34.0 39.0 28.0 40.0 41 34.16200891272279 35.0 34.0 38.0 28.0 40.0 42 34.00684661164387 35.0 34.0 38.0 27.0 40.0 43 33.76182721842345 35.0 34.0 37.0 26.0 40.0 44 33.718175383509475 35.0 33.0 37.0 26.0 40.0 45 33.544821602217375 35.0 33.0 37.0 26.0 40.0 46 33.22326899796917 35.0 33.0 36.0 24.0 40.0 47 33.15525711727882 35.0 33.0 36.0 24.0 39.0 48 32.97795302849558 35.0 33.0 36.0 24.0 39.0 49 32.77395817944076 35.0 33.0 36.0 24.0 39.0 50 32.41533464605995 35.0 32.0 35.0 23.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 3.0 15 6.0 16 40.0 17 100.0 18 211.0 19 412.0 20 712.0 21 1220.0 22 1973.0 23 3015.0 24 4137.0 25 6116.0 26 8266.0 27 11381.0 28 14420.0 29 17590.0 30 22425.0 31 26018.0 32 32600.0 33 46617.0 34 97872.0 35 130071.0 36 134908.0 37 143759.0 38 157928.0 39 45215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.43198481176779 0.3994408049233863 0.07067114434333166 0.09790323896548911 8 99.23518607127974 0.5856554114692322 0.043328798325942816 0.135829718925093 9 98.51601622018526 0.7811311352145162 0.35710426915452614 0.34574837544569126 10 54.15239829860047 34.79159178759407 3.2216560200569337 7.834353893748526 11 37.22186329267997 23.81055282254597 21.062206042217465 17.905377842556597 12 37.955145322364054 12.920471258563776 24.483527339038474 24.640856080033693 13 23.177048305546307 13.783298677644765 28.391388043015688 34.64826497379324 14 21.316004754040165 20.404776972452588 33.936592217574514 24.342626055932737 15 29.59665629568542 18.545828197455837 29.316176746216723 22.541338760642017 16 31.853502356072315 18.77250506605161 28.793474881424626 20.580517696451448 17 35.334910663294444 18.178691051335257 24.055531422750153 22.430866862620146 18 32.774763014625954 19.36179877356348 23.81132458231259 24.05211362949798 19 28.03924508664657 22.816305740349144 25.837193969689686 23.307255203314597 20 29.890366012581886 25.722312015858563 22.08181094531751 22.305511026242037 21 27.56229755087551 21.466608159926263 29.984741206899972 20.986353082298255 22 27.56042327715657 18.69169079334699 26.950843312922125 26.797042616574313 23 28.295248826373896 24.257070973233166 25.576228917176948 21.87145128321599 24 29.486294649058785 24.234359185815496 23.0955725244703 23.18377364065542 25 26.682160662743186 22.390625103360684 20.73597216372773 30.1912420701684 26 29.397652527292735 21.631213493006754 24.045939551365024 24.92519442833549 27 23.390936012295235 19.176245675389023 22.357990690372187 35.074827621943555 28 24.790908228943636 27.06737903768172 21.495053019895966 26.646659713478677 29 31.574456074741626 21.588987208633124 22.255236390016517 24.581320326608733 30 26.87024954300797 24.075376673891807 25.183292944572212 23.871080838528012 31 34.117625008544486 20.82737057037457 22.41951096891131 22.635493452169637 32 33.71377414781184 19.57734025124088 25.43235084639996 21.27653475454732 33 37.05736821099471 18.900617187310505 23.05268473172528 20.989329869969506 34 27.099792947879752 21.841352652317816 28.204291425307986 22.854562974494442 35 23.98177323934034 30.85539647504239 25.339519171615116 19.82331111400215 36 28.11675181749425 28.327221730991003 22.59624395546726 20.959782496047488 37 29.69599280278892 25.91425969495644 23.56469221117993 20.825055291074708 38 30.91570398823397 27.701324560262307 21.171134420706096 20.211837030797625 39 29.93601009020769 23.967550809355494 21.097596740086747 24.99884236035007 40 26.18713189815417 21.946863237554272 23.780123437462102 28.085881426829456 41 23.761270448877532 25.85307017060301 24.589258427065396 25.796400953454068 42 23.08730366982794 23.51265355263071 25.499163191910196 27.900879585631156 43 23.09678528981784 21.134420706094037 24.395436474248584 31.37335752983954 44 24.311865916663177 20.29441532582595 23.05444875404898 32.3392700034619 45 29.262925322319955 22.4907333702308 22.3647160254813 25.881625281967946 46 25.77633519952195 24.71020420763425 22.41157286845465 27.10188772438915 47 26.481613374817258 22.457106694685223 25.55528115208298 25.50599877841454 48 27.40111001104719 21.110055147747893 26.585029183544318 24.903805657660598 49 29.911754783256782 21.161983554901887 24.465225607430064 24.46103605441127 50 23.535916597024535 22.216097144709366 24.49962404274226 29.748362215523837 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.0 8 2.0 9 5.5 10 9.0 11 6.5 12 4.0 13 75.0 14 146.0 15 617.0 16 1088.0 17 1705.5 18 2323.0 19 2248.5 20 2174.0 21 2181.5 22 2189.0 23 2301.0 24 2413.0 25 2525.5 26 2638.0 27 3422.5 28 4207.0 29 5126.5 30 6046.0 31 6091.0 32 6136.0 33 6857.5 34 7579.0 35 9818.0 36 12057.0 37 12943.0 38 13829.0 39 15639.0 40 17449.0 41 19042.0 42 20635.0 43 21562.0 44 22489.0 45 23540.0 46 24591.0 47 27767.5 48 30944.0 49 32669.0 50 34394.0 51 37804.5 52 41215.0 53 42238.0 54 43261.0 55 45701.0 56 48141.0 57 58057.0 58 67973.0 59 74647.5 60 81322.0 61 79908.0 62 78494.0 63 76648.5 64 74803.0 65 88466.0 66 102129.0 67 79316.5 68 56504.0 69 42849.0 70 29194.0 71 25368.5 72 21543.0 73 19563.0 74 17583.0 75 14392.0 76 11201.0 77 11893.0 78 12585.0 79 8929.0 80 5273.0 81 3261.5 82 1250.0 83 1080.0 84 910.0 85 577.0 86 244.0 87 135.0 88 26.0 89 22.5 90 19.0 91 10.5 92 2.0 93 2.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 907018.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.059399889326027 #Duplication Level Percentage of deduplicated Percentage of total 1 71.21919776172042 7.876415878438592 2 11.583223250284702 2.5620699586447455 3 4.395902833250651 1.4584814192262066 4 2.263942816578496 1.001513957404347 5 1.2909673323078634 0.7138661986024551 6 0.781980211598206 0.5188939119362604 7 0.4879876512226001 0.37777954031465844 8 0.3579909408558707 0.3167331977344909 9 0.2799929146358759 0.2786898248222469 >10 3.020923553982075 8.725313932143182 >50 2.07794741647625 16.73178506216549 >100 2.1109465814154786 41.99203171989336 >500 0.08799777317127527 6.632707239569151 >1k 0.03799903841486887 6.497011836768795 >5k 9.99974695128128E-4 0.8529899281166631 >10k+ 0.001999949390256256 3.463716394219355 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTCCGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 20301 2.2382135745927867 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGA 11019 1.21486012405487 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 7713 0.8503690114198394 No Hit TTCCGCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3039 0.3350539901082448 No Hit TTCCGCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3033 0.3343924817368564 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTG 2868 0.31620100152367425 No Hit TTCCGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2828 0.311790945714418 No Hit TTCCGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2492 0.27474647691666537 No Hit TTCCGCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 2164 0.23858401928076398 No Hit TTCCGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2051 0.22612561161961506 No Hit TTCCGCGGGGTTCATAATTCTGAGGTCAGGAGGTGGAATCTAGAGATGGC 1899 0.20936739954444125 No Hit TTCCGCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1752 0.19316044444542446 No Hit TTCCGCGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGC 1679 0.18511209259353179 No Hit TTCCGCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 1672 0.18434033282691192 No Hit TTCCGCGAGGACCGTTGGGAAGGCAAAGGCCTACATTCTGTTTTATGTGG 1649 0.18180455073658958 No Hit TTCCGCGGGGGCTGGAGACAGTGGAGTCCGTCACGCTGGCGGTGGTGTAC 1586 0.17485871283701096 No Hit TTCCGCGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATG 1534 0.16912564028497779 No Hit TTCCGCGGGACCTTCTTAGATCTTGAAAATCCTTTCCTTTATGCCCTGTC 1511 0.16658985819465547 No Hit TTCCGCGGGGCTTCTTCCTCGGCGCTGCCTACGAGGTGGCTGCCATCTGT 1505 0.165928349823267 No Hit TTCCGCGGGACCCCATACTCTATCCCTCTTCCTGCTCCCAACACATACTT 1472 0.1622900537806306 No Hit TTCCGCGGGTGAATGTGGGAAGGACTGTAATCATAATAAGCTCACTACTT 1363 0.15027265170040727 No Hit TTCCGCGGGATGGCTACAGAAAACACGGGGTATGTAGGCTCCTGAGTCAT 1351 0.1489496349576304 No Hit TTCCGCGGGCTAACCATACGCCTTGCTTTGGGTGGCTGCACCAACCGGCC 1313 0.14476008193883694 No Hit TTCCGCGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 1305 0.14387807077698567 No Hit TTCCGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1287 0.14189354566282036 No Hit TTCCGCGGGGCTGATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGAC 1231 0.1357194675298616 No Hit TTCCGCGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 1212 0.13362469102046484 No Hit TTCCGCGGGGCCTTTTCCTGTGGGAGCAGCCGGGTAGAGAGGAGCGTGGC 1193 0.13152991451106813 No Hit TTCCGCGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1175 0.12954538939690283 No Hit TTCCGCGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1122 0.12370206544963826 No Hit TTCCGCGGGGCTTTTGTGACTGGCGGTGAACGAGTGCGCAGTGCCATGAA 1094 0.12061502638315888 No Hit TTCCGCAGGTACAGATCTGTATTGTTCTTACTGAAACACAGCATGGAATT 1085 0.11962276382607621 No Hit TTCCGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1073 0.11829974708329934 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGG 1051 0.11587421638820838 No Hit TTCCGCGGGGTGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGCCTGC 1042 0.11488195383112573 No Hit TTCCGCGGGGCTCTTTCTAAGCCGGCGATCCGTCAGGGTGAAGCCATGTT 1039 0.11455119964543152 No Hit TTCCGCGGGGCCCTTCGCGTCGTGCAGGGACGGATTCGGGGTGGCGGTGC 1036 0.1142204454597373 No Hit TTCCGCGGGCGTCTTTAAAATAAAGGGGAGGGGAGGGGGAGATGATGCAT 1020 0.1124564231360348 No Hit TTCCGCGGGGACTTTAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCA 1018 0.11223592034557198 No Hit TTCCGCGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGT 1003 0.11058214941710087 No Hit TTCCGCGGGGGGCAGGCAGCTTTTACATCCTGTAGTGCCTGATAGCACCA 1001 0.11036164662663805 No Hit TTCCGCGGGGAGCCTTTGCTGAGGAGCTGGGCTTCCACAGGGACTCAAGT 976 0.10760536174585289 No Hit TTCCGCGGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCT 960 0.10584133942215038 No Hit TTCCGCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 954 0.10517983105076195 No Hit TTCCGCGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 923 0.10176203779858833 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.3075418569422E-4 0.0 0.0 0.0 0.0 8 6.6150837138844E-4 0.0 0.0 0.0 0.0 9 0.003197290461710793 0.0 0.0 0.0 0.0 10 0.01907349137503335 0.0 0.0 0.0 0.0 11 0.04939262506367018 0.0 0.0 0.0 0.0 12 0.05424368645385207 0.0 0.0 0.0 0.0 13 0.06019726179634803 0.0 0.0 0.0 0.0 14 0.1210560319640845 0.0 0.0 0.0 0.0 15 0.13164016590629954 0.0 0.0 0.0 0.0 16 0.1476266182148535 0.0 0.0 0.0 0.0 17 0.15302893658119243 0.0 0.0 0.0 0.0 18 0.15677748401906025 0.0 0.0 0.0 0.0 19 0.17022815423729187 0.0 0.0 0.0 0.0 20 0.17970977422719284 0.0 0.0 0.0 0.0 21 0.1870966177076971 0.0 0.0 0.0 0.0 22 0.19305019305019305 0.0 0.0 0.0 0.0 23 0.20583935489703623 0.0 0.0 0.0 0.0 24 0.2268973713862349 0.0 0.0 0.0 0.0 25 0.23296119812396227 0.0 0.0 0.0 0.0 26 0.2437658348566401 0.0 0.0 0.0 0.0 27 0.2534679576370039 0.0 0.0 0.0 0.0 28 0.3576555261306832 0.0 0.0 0.0 0.0 29 0.36537312379688164 0.0 0.0 0.0 0.0 30 0.39690502283306395 0.0 0.0 0.0 0.0 31 0.40550463166111367 0.0 0.0 0.0 0.0 32 0.41377348630346916 0.0 0.0 0.0 0.0 33 0.42171158676013043 0.0 0.0 0.0 0.0 34 0.4310829553548 0.0 0.0 0.0 0.0 35 0.5445316410479175 0.0 0.0 0.0 0.0 36 0.559305328008926 0.0 0.0 0.0 0.0 37 0.5715432328796121 0.0 0.0 0.0 0.0 38 0.5803633444981247 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 20 7.855601E-4 44.000004 29 AACGTTG 20 7.855601E-4 44.000004 29 CGGAATT 40 8.309144E-9 44.000004 32 TAATAGG 65 0.0 44.000004 13 AACCGAA 20 7.855601E-4 44.000004 35 GATAATC 40 8.309144E-9 44.000004 13 CGTATAG 20 7.855601E-4 44.000004 26 CGTATAC 20 7.855601E-4 44.000004 18 GTACACG 40 8.309144E-9 44.000004 32 TTTACGC 20 7.855601E-4 44.000004 13 ACGCATA 20 7.855601E-4 44.000004 26 TCATTCG 20 7.855601E-4 44.000004 43 ACGCAAT 20 7.855601E-4 44.000004 18 ACGCAAC 20 7.855601E-4 44.000004 15 ACACCTA 20 7.855601E-4 44.000004 40 CTATACC 20 7.855601E-4 44.000004 28 CGCATAA 20 7.855601E-4 44.000004 27 ATATGTG 20 7.855601E-4 44.000004 12 GTAGGGT 20 7.855601E-4 44.000004 44 CGATTAT 20 7.855601E-4 44.000004 42 >>END_MODULE