##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527284_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5267709 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06557309828618 33.0 31.0 34.0 30.0 34.0 2 32.029162582823005 33.0 31.0 34.0 30.0 34.0 3 32.747982092404875 34.0 31.0 34.0 31.0 34.0 4 36.4588040075866 37.0 37.0 37.0 35.0 37.0 5 36.14843340814764 37.0 37.0 37.0 35.0 37.0 6 35.18250799351293 35.0 35.0 37.0 33.0 37.0 7 36.329500167909806 37.0 35.0 37.0 35.0 37.0 8 36.607267789469766 37.0 37.0 37.0 35.0 37.0 9 38.66798697498286 39.0 39.0 39.0 38.0 39.0 10 38.08597228890206 39.0 38.0 39.0 37.0 39.0 11 37.73846467221329 39.0 38.0 39.0 35.0 39.0 12 37.44722421075272 39.0 37.0 39.0 35.0 39.0 13 37.275697841319634 39.0 37.0 39.0 34.0 39.0 14 38.16639586583086 40.0 38.0 40.0 35.0 40.0 15 38.07595123420827 40.0 38.0 40.0 34.0 40.0 16 33.008845591128896 40.0 34.0 40.0 3.0 40.0 17 34.75957574725559 40.0 35.0 40.0 17.0 40.0 18 36.758451919041086 40.0 34.0 40.0 31.0 40.0 19 37.64618015156115 40.0 37.0 40.0 33.0 40.0 20 37.906614241599144 40.0 38.0 40.0 34.0 40.0 21 38.1144005866687 40.0 38.0 40.0 34.0 40.0 22 38.16983037597559 40.0 38.0 40.0 34.0 40.0 23 38.09335101844084 40.0 38.0 40.0 34.0 40.0 24 38.04476974715194 40.0 38.0 40.0 34.0 40.0 25 37.930073775905235 40.0 37.0 40.0 34.0 40.0 26 37.763577866582985 40.0 37.0 40.0 34.0 40.0 27 37.62651012043376 40.0 37.0 40.0 33.0 40.0 28 37.52466470718105 40.0 37.0 40.0 33.0 40.0 29 37.32813961439404 40.0 36.0 40.0 33.0 40.0 30 37.302159439710884 40.0 36.0 40.0 33.0 40.0 31 37.223557527570335 40.0 36.0 40.0 33.0 40.0 32 37.11430035334146 39.0 36.0 40.0 32.0 40.0 33 36.79214189698026 39.0 35.0 40.0 31.0 40.0 34 36.710889686579115 39.0 35.0 40.0 31.0 40.0 35 36.66194298128465 39.0 35.0 40.0 31.0 40.0 36 36.563822337186814 39.0 35.0 40.0 31.0 40.0 37 36.183412940995794 39.0 35.0 40.0 30.0 40.0 38 36.14906461233907 38.0 35.0 40.0 30.0 40.0 39 35.71431926099183 38.0 35.0 40.0 29.0 40.0 40 35.58941904345893 38.0 35.0 40.0 28.0 40.0 41 35.481514639476096 38.0 34.0 40.0 29.0 40.0 42 35.37557522634603 38.0 34.0 40.0 29.0 40.0 43 35.21399112973021 37.0 34.0 40.0 28.0 40.0 44 35.48054875468633 37.0 35.0 40.0 29.0 40.0 45 35.49356807674835 37.0 35.0 40.0 30.0 40.0 46 35.376211935777015 37.0 35.0 40.0 29.0 40.0 47 35.04360909078311 37.0 34.0 40.0 28.0 40.0 48 34.95831565487008 36.0 34.0 40.0 28.0 40.0 49 34.83129554043323 36.0 34.0 40.0 28.0 40.0 50 34.326877965354576 35.0 34.0 40.0 26.0 40.0 51 34.34635417408213 35.0 34.0 39.0 26.0 40.0 52 33.890343221313096 35.0 33.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 8.0 14 19.0 15 62.0 16 133.0 17 394.0 18 876.0 19 1658.0 20 3086.0 21 5245.0 22 8612.0 23 13394.0 24 19225.0 25 26753.0 26 36476.0 27 48636.0 28 62496.0 29 75220.0 30 91704.0 31 117001.0 32 156148.0 33 220798.0 34 328566.0 35 448574.0 36 699101.0 37 1115360.0 38 1323268.0 39 464891.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.6403370041891 0.22039941841889898 0.1187992730805745 0.020464304311418872 8 98.95130881375566 0.7581474223424263 0.18770968555780132 0.10283407834411507 9 96.02206575951709 2.1476129376167137 0.6658492335092921 1.1644720693569064 10 55.48618953704542 27.65969038912362 7.200075023126752 9.654045050704205 11 31.33436186395262 28.538231705661797 20.070262043708183 20.057144386677397 12 32.20838508733113 18.807720775767987 25.992874701317024 22.991019435583855 13 24.164261921074228 18.829248160822857 30.353176304917373 26.653313613185542 14 27.409315890456366 20.33128633339465 27.888689371413644 24.370708404735343 15 25.665293963656687 18.95085700443969 27.716394356635877 27.66745467526775 16 27.178703303466463 29.77637906725675 22.633311748997524 20.411605880279264 17 31.85003195886485 19.199769767084703 23.4748920261161 25.47530624793435 18 28.8006797642011 20.67242135053398 25.952325764388274 24.574573120876646 19 30.83270165455229 18.775486648939797 24.54685708720812 25.84495460929979 20 25.46125839525304 20.642617122547964 27.112108888323178 26.78401559387582 21 29.074840694503056 19.982140243510035 28.36768318067684 22.57533588131007 22 28.086593241957747 19.35000585643588 28.38305988428746 24.180341017318916 23 28.22980540496827 22.25240612190233 26.02136906195843 23.496419411170965 24 29.425562421918144 20.106691542756064 27.203514848675205 23.26423118665059 25 28.503415811313797 18.532534731891985 27.05079190972774 25.913257547066475 26 30.893980665978322 18.13344283064991 25.033045675074305 25.939530828297464 27 29.94835136109455 17.492519043857584 26.044604969636705 26.514524625411163 28 32.219680320230296 21.28747051137411 21.39432910967557 25.098520058720027 29 33.38253878488732 20.419465084346914 22.235434797176534 23.962561333589232 30 31.419712060783922 21.520588931545003 22.535052714567186 24.524646293103892 31 31.560475341367567 23.076844222032765 21.106537965555805 24.256142471043866 32 31.94588007803772 23.69470295340916 22.30166852421043 22.057748444342693 33 31.727796656952766 23.320460564545233 22.36363094468582 22.58811183381618 34 28.340460720210626 25.268499076163852 24.179923378455413 22.21111682517011 35 29.102101122138674 27.779761562379395 22.63353955201398 20.484597763467953 36 29.57980404764196 27.063415993556212 20.879380390982114 22.47739956781971 37 29.055059799241 27.798175639542734 20.981094437828666 22.165670123387603 38 29.909226193018633 26.96211958557316 20.774477101905212 22.354177119502992 39 29.270048896019123 25.804500590294566 20.828181663034158 24.097268850652153 40 27.64131427912969 26.59898259376135 21.92157919125753 23.838123935851428 41 26.189829392625903 25.956900808302052 23.106401663417625 24.746868135654417 42 25.658934462780692 25.04257543459595 23.05469037868265 26.243799723940715 43 25.17690327996478 24.585906320945217 25.159495332790783 25.07769506629922 44 25.67457693657717 24.73094090808737 24.392615461484297 25.20186669385116 45 26.24040166227861 24.882866536477245 23.463122203599326 25.41360959764482 46 26.21424228255585 25.363606835533247 23.510771001207544 24.911379880703358 47 26.57593652193012 25.836222160335737 23.39867293352765 24.189168384206493 48 27.58354723087399 25.705064573612553 23.848280153668323 22.863108041845138 49 26.86815084128603 26.181533566110048 23.095429151458443 23.854886441145474 50 24.63344121704521 26.82771580586551 22.752281874340436 25.78656110274884 51 25.082516896814155 27.67123240862394 22.041479512250962 25.204771182310942 52 26.533299390683883 27.15873257235736 22.070296593832346 24.237671443126413 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 7.5 2 15.0 3 75.0 4 135.0 5 459.0 6 783.0 7 8474.5 8 16166.0 9 13276.5 10 10387.0 11 10321.5 12 10256.0 13 9867.5 14 9885.0 15 10291.0 16 12139.0 17 13987.0 18 14953.5 19 15920.0 20 19053.0 21 22186.0 22 28121.5 23 34057.0 24 41635.0 25 49213.0 26 67649.0 27 86085.0 28 97581.0 29 109077.0 30 101719.5 31 94362.0 32 91710.0 33 89058.0 34 92633.5 35 96209.0 36 100984.0 37 105759.0 38 102927.5 39 106065.0 40 112034.0 41 121838.5 42 131643.0 43 153247.5 44 174852.0 45 188519.5 46 202187.0 47 227508.0 48 252829.0 49 288453.0 50 324077.0 51 343618.5 52 363160.0 53 392261.0 54 421362.0 55 445517.0 56 469672.0 57 440182.0 58 410692.0 59 406993.0 60 403294.0 61 364081.5 62 324869.0 63 289641.0 64 211032.0 65 167651.0 66 151371.5 67 135092.0 68 117204.0 69 99316.0 70 92644.5 71 85973.0 72 61779.0 73 37585.0 74 25700.0 75 13815.0 76 10115.0 77 6415.0 78 4320.5 79 2226.0 80 1456.5 81 687.0 82 439.5 83 192.0 84 135.0 85 78.0 86 68.5 87 59.0 88 34.5 89 7.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5267709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.61799196762016 #Duplication Level Percentage of deduplicated Percentage of total 1 70.35348918359736 7.470127830454887 2 10.201778516697345 2.1664480469146463 3 4.27822912999819 1.3627860761387809 4 2.432506422481182 1.0331333462035857 5 1.4768688843865851 0.7840690975822453 6 1.017399983310567 0.6481646910389092 7 0.7046018578219123 0.5237019806706316 8 0.5193952896250393 0.44119480106067316 9 0.42226290500434166 0.403522572020405 >10 4.316073037282543 11.208285475403377 >50 2.240893944264137 17.212362837809376 >100 1.8976212125085763 35.697136854844636 >500 0.08971870097896195 6.4961920480652395 >1k 0.04260614110416458 8.128173226401241 >5k 0.0043015815537858475 2.9286705349191173 >10k+ 0.002253209385316396 3.4960305804721656 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATTGTGGGGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAA 25472 0.4835498695922649 No Hit TATTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 19075 0.362111878237769 No Hit TATTGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 18334 0.3480450419717566 No Hit TATTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 16879 0.3204239262267525 No Hit TATTGTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 14001 0.26578916944728725 No Hit TATTGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 12928 0.2454197830593907 No Hit TATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12131 0.23028986604992796 No Hit TATTGTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 10636 0.20190940691674503 No Hit TATTGTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 10519 0.199688327506322 No Hit TATTGTGGGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAA 10464 0.19864423034757617 No Hit TATTGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 10301 0.19554990604074748 No Hit TATTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 9970 0.1892663395035679 No Hit TATTGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTATTGTGGGAAG 8996 0.1707763280014139 No Hit TATTGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 8226 0.15615896777897184 No Hit TATTGTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 7722 0.14659124108791888 No Hit TATTGTGGGGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAA 7279 0.13818151306383858 No Hit TATTGTGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGCAG 6696 0.12711408318113246 No Hit TATTGTGGGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAA 6515 0.12367805434962333 No Hit TATTGTGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 6449 0.1224251377591283 No Hit TATTGTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 6272 0.11906504326643708 No Hit TATTGTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 6231 0.1182867162935538 No Hit TATTGTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 6165 0.11703379970305877 No Hit TATTGTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 5996 0.1138255738880033 No Hit TATTGTGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 5583 0.1059853534050571 No Hit TATTGTGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 5551 0.10537787869451405 No Hit TATTGTGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 5442 0.10330866796172682 No Hit TATTGTGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 5416 0.10281509475941059 No Hit TATTGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5343 0.10142929307598426 No Hit TATTGTGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 5330 0.10118250647482616 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.2272093997599334E-4 0.0 0.0 0.0 0.0 8 0.002107177902196192 0.0 0.0 0.0 0.0 9 0.005030649946684602 0.0 0.0 0.0 0.0 10 0.033468059833980955 0.0 0.0 0.0 0.0 11 0.06067153671548675 0.0 0.0 0.0 0.0 12 0.07247932640166721 0.0 0.0 0.0 0.0 13 0.08500849230661754 0.0 0.0 0.0 0.0 14 0.10328968437702235 0.0 0.0 0.0 0.0 15 0.12075458230513493 0.0 0.0 0.0 0.0 16 0.14448406318572268 0.0 0.0 0.0 1.89835847044702E-5 17 0.15815224417294121 0.0 0.0 0.0 1.89835847044702E-5 18 0.1710800653566854 0.0 0.0 0.0 1.89835847044702E-5 19 0.18533673746974255 0.0 0.0 0.0 1.89835847044702E-5 20 0.1987391482710985 0.0 0.0 0.0 1.89835847044702E-5 21 0.21187578888659186 0.0 0.0 0.0 1.89835847044702E-5 22 0.22795488513127812 0.0 0.0 0.0 1.89835847044702E-5 23 0.24200273781258608 0.0 0.0 0.0 1.89835847044702E-5 24 0.259562553664221 0.0 0.0 0.0 1.89835847044702E-5 25 0.272319522585625 0.0 0.0 0.0 1.89835847044702E-5 26 0.286006687157548 0.0 0.0 0.0 1.89835847044702E-5 27 0.29988368757651573 0.0 0.0 0.0 1.89835847044702E-5 28 0.3259481493757533 0.0 0.0 0.0 1.89835847044702E-5 29 0.3410021320463982 0.0 0.0 0.0 1.89835847044702E-5 30 0.3600047003355728 0.0 0.0 0.0 1.89835847044702E-5 31 0.3805829061552185 0.0 0.0 0.0 1.89835847044702E-5 32 0.4006105880184346 0.0 0.0 0.0 1.89835847044702E-5 33 0.41921450102881536 0.0 0.0 0.0 1.89835847044702E-5 34 0.4424693922917914 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 35 0.48603671918855046 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 36 0.5100319702550008 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 37 0.5309708641840314 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 38 0.552270446222447 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 39 0.5734371431679313 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 40 0.5971666240485191 0.0 1.89835847044702E-5 0.0 1.89835847044702E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGTC 20 6.3135254E-4 46.0 24 GTGGGAT 33975 0.0 41.50493 5 GTGGGGG 90095 0.0 41.445694 5 GTGGGGC 71320 0.0 41.217472 5 TGTGGGG 316880 0.0 40.915585 4 TGGGGCT 35755 0.0 40.886032 6 TCGTATA 40 2.9132207E-7 40.25 31 TGGGATT 12810 0.0 40.200626 6 TGGGGGT 19160 0.0 40.08194 6 GTGGGAC 24605 0.0 39.96139 5 GTGGGGT 59425 0.0 39.81893 5 TGGGGGC 24600 0.0 39.586178 6 TGGGGCC 14995 0.0 39.48116 6 TGGGATA 5375 0.0 39.410233 6 TTGTGGG 582710 0.0 39.39812 3 GTGGGCT 18005 0.0 39.395725 5 TGGGGTC 13865 0.0 39.348 6 ATTGTGG 607720 0.0 39.326923 2 TGGGGGG 33925 0.0 39.281357 6 TATTGTG 616770 0.0 39.152245 1 >>END_MODULE