##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527281_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1091403 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21372032145779 33.0 31.0 34.0 31.0 34.0 2 32.57684008565122 34.0 31.0 34.0 31.0 34.0 3 32.73208521508554 34.0 31.0 34.0 31.0 34.0 4 36.33374839541398 37.0 37.0 37.0 35.0 37.0 5 36.34061845166268 37.0 37.0 37.0 35.0 37.0 6 35.326597049852346 37.0 35.0 37.0 33.0 37.0 7 36.290537042687255 37.0 35.0 37.0 35.0 37.0 8 36.563563596581645 37.0 37.0 37.0 35.0 37.0 9 38.66501558086243 39.0 39.0 39.0 38.0 39.0 10 37.94722847564098 39.0 38.0 39.0 35.0 39.0 11 37.55651761998089 39.0 37.0 39.0 35.0 39.0 12 36.97317031380709 39.0 35.0 39.0 34.0 39.0 13 36.90745673229779 39.0 37.0 39.0 33.0 39.0 14 37.61572031596028 40.0 37.0 40.0 33.0 40.0 15 37.53144896981225 40.0 37.0 40.0 33.0 40.0 16 32.59475555775456 39.0 33.0 40.0 3.0 40.0 17 34.182171938321595 39.0 33.0 40.0 17.0 40.0 18 36.15474393968131 39.0 34.0 40.0 30.0 40.0 19 37.05973137328741 39.0 36.0 40.0 32.0 40.0 20 37.34806941157391 39.0 36.0 40.0 33.0 40.0 21 37.510020588178705 40.0 36.0 40.0 33.0 40.0 22 37.565026850759985 40.0 36.0 40.0 33.0 40.0 23 37.588582769151266 40.0 36.0 40.0 33.0 40.0 24 37.54972911014538 40.0 36.0 40.0 33.0 40.0 25 37.50183937555605 40.0 36.0 40.0 33.0 40.0 26 37.39327177953515 40.0 36.0 40.0 33.0 40.0 27 37.261076797479944 39.0 35.0 40.0 33.0 40.0 28 37.14816433526388 39.0 35.0 40.0 33.0 40.0 29 37.01950516903472 39.0 35.0 40.0 32.0 40.0 30 36.97282122185847 39.0 35.0 40.0 32.0 40.0 31 36.90785438559359 39.0 35.0 40.0 32.0 40.0 32 36.833347535236754 39.0 35.0 40.0 32.0 40.0 33 36.534144582706844 39.0 35.0 40.0 31.0 40.0 34 36.33643209703473 38.0 35.0 40.0 30.0 40.0 35 36.18714901828197 38.0 35.0 40.0 30.0 40.0 36 36.14869484507556 38.0 35.0 40.0 30.0 40.0 37 36.05996685000866 38.0 35.0 40.0 30.0 40.0 38 36.019047043117894 38.0 35.0 40.0 30.0 40.0 39 35.64574313979346 38.0 34.0 40.0 29.0 40.0 40 35.707125598885106 38.0 34.0 40.0 29.0 40.0 41 35.62798801176101 38.0 34.0 40.0 29.0 40.0 42 35.54016527350576 38.0 34.0 40.0 29.0 40.0 43 35.479633096115734 38.0 34.0 40.0 29.0 40.0 44 35.864254542089405 38.0 35.0 40.0 30.0 40.0 45 35.976506386733405 38.0 35.0 40.0 30.0 40.0 46 35.92638008141814 38.0 35.0 40.0 31.0 40.0 47 35.633557906657764 37.0 35.0 40.0 30.0 40.0 48 35.58848381395323 37.0 35.0 40.0 30.0 40.0 49 35.52774914490798 37.0 34.0 40.0 30.0 40.0 50 35.03292001213117 37.0 34.0 40.0 28.0 40.0 51 35.11459561683448 36.0 34.0 40.0 28.0 40.0 52 34.81038351553001 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 2.0 15 10.0 16 29.0 17 69.0 18 134.0 19 269.0 20 544.0 21 918.0 22 1479.0 23 2280.0 24 3430.0 25 4795.0 26 6841.0 27 9649.0 28 12657.0 29 16966.0 30 21925.0 31 28666.0 32 39251.0 33 56054.0 34 86590.0 35 92284.0 36 124635.0 37 195453.0 38 286617.0 39 99852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.55030360004507 0.35330670705504746 0.03829932664652745 0.05809036625334547 8 99.3317775377198 0.5110852728094023 0.1028034557354158 0.054333733735384644 9 98.05058259872843 1.3559610886171285 0.29649909336881064 0.29695721928563507 10 59.22642690188684 31.96491121977858 3.268361915809284 5.5402999625252995 11 35.64879334214768 24.921866624885585 22.55024037866856 16.879099654298184 12 31.691868173351185 16.793796608585463 28.25299179129982 23.261343426763535 13 27.259316677707503 16.39247830544721 30.7273298680689 25.62087514877639 14 24.620328146431703 20.545847867378043 31.98534363566895 22.848480350521303 15 25.61711851625843 21.266938060459793 31.435867411029655 21.68007601225212 16 28.60684824945506 29.04518312667273 23.75776867023455 18.590199953637658 17 30.640927320155797 21.333091442849252 24.966396464000923 23.059584772994025 18 27.921400252702256 21.562062776078132 27.204341567688562 23.312195403531053 19 28.40857135265342 22.341609836146684 26.473447479986767 22.776371331213127 20 27.717076093798532 23.182820644619813 26.698937056247786 22.40116620533387 21 27.719733224116116 22.151945706581344 28.220922977122108 21.907398092180433 22 26.342606718141692 21.310368397374756 28.72449498489559 23.622529899587963 23 27.490578640520503 21.65222195650919 28.598785233318946 22.25841416965136 24 26.901337086300842 22.441114785280963 27.153397965737682 23.504150162680514 25 28.076063562222203 23.98820600639727 23.45549719031375 24.480233241066774 26 26.09256159273889 23.01734556346281 25.81090577907519 25.07918706472311 27 23.896672448215735 22.210860699484975 26.150102207892047 27.742364644407246 28 24.39749570048827 24.127476285111914 25.407480096719542 26.067547917680272 29 27.41920262267925 22.861766002109214 25.14653157449631 24.572499800715224 30 27.9207588764187 21.380278412282173 26.270406073650154 24.42855663764897 31 27.261698932474985 23.417014613300495 25.47592410869312 23.84536234553139 32 29.19462380074088 22.3045016368839 25.518071693040977 22.982802869334243 33 31.100702490280856 21.67970951151866 25.806141269540216 21.413446728660265 34 27.55343351630882 23.123722401349454 28.00679492359834 21.31604915874338 35 25.106033243449026 25.276456084507736 28.93083489783334 20.686675774209892 36 24.88869830850749 26.750613659665586 27.01596019069033 21.344727841136592 37 27.241449766951348 26.042534242621652 24.73156111903669 21.98445487139031 38 25.979129615733143 25.932034271483584 25.824832806946656 22.264003305836617 39 27.066720542274485 25.42223175124129 25.775080332379513 21.73596737410471 40 26.46785834380151 24.875870782836405 24.882742671588773 23.773528201773313 41 24.504605539841837 25.384298925328224 25.36606551383861 24.74503002099133 42 24.376880034231167 24.59760510095721 25.1024598612978 25.923055003513827 43 23.186577277137776 23.772703575123032 26.5080817992987 26.532637348440492 44 23.95192243378477 22.921872122396586 26.438171784391283 26.68803365942736 45 24.97601710825424 23.117858389614103 26.36047362889785 25.54565087323381 46 25.22798636250771 25.409770726303666 24.834456199955472 24.52778671123316 47 24.03072009147858 25.45439219060237 25.87880003994858 24.636087677970465 48 24.679518014885428 24.43322952200058 25.80623289472358 25.08101956839041 49 25.79853637932093 23.53621897685823 26.032272222084785 24.63297242173606 50 24.579921440567784 24.252727910771732 27.082296823446516 24.08505382521397 51 23.410142724548127 24.787360855705913 27.51870757181353 24.283788847932435 52 22.663305854940845 25.081111193573776 27.698567806758824 24.557015144726556 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.0 8 2.0 9 3.0 10 4.0 11 24.5 12 45.0 13 203.0 14 890.0 15 1419.0 16 2258.5 17 3098.0 18 3225.0 19 3352.0 20 3067.5 21 2783.0 22 3303.0 23 3823.0 24 4555.0 25 5287.0 26 5320.0 27 5353.0 28 5822.5 29 6292.0 30 7576.5 31 8861.0 32 10323.0 33 11785.0 34 13858.0 35 15931.0 36 18008.0 37 20085.0 38 22589.0 39 26478.0 40 27863.0 41 31942.5 42 36022.0 43 37884.0 44 39746.0 45 40335.5 46 40925.0 47 44794.5 48 48664.0 49 49916.0 50 51168.0 51 50918.5 52 50669.0 53 54789.5 54 58910.0 55 60044.5 56 61179.0 57 66287.5 58 71396.0 59 78622.0 60 85848.0 61 88669.0 62 91490.0 63 85076.0 64 75343.5 65 72025.0 66 65685.5 67 59346.0 68 47346.0 69 35346.0 70 27851.5 71 20357.0 72 19442.0 73 18527.0 74 15663.0 75 12799.0 76 11128.5 77 9458.0 78 6780.0 79 4102.0 80 3246.5 81 2391.0 82 1504.5 83 618.0 84 448.5 85 279.0 86 147.5 87 16.0 88 17.0 89 9.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1091403.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.107377980638313 #Duplication Level Percentage of deduplicated Percentage of total 1 70.16305636675241 8.494906437091029 2 10.121185362094288 2.4508203358195835 3 4.166291596912631 1.5132860142413527 4 2.2639811019749523 1.096434997705312 5 1.309135668298273 0.7925100182011369 6 0.8744743995909389 0.6352555254143547 7 0.698149528969885 0.5916932163970098 8 0.5057541959992139 0.4898685773005053 9 0.43069366908332124 0.46931139409137557 >10 5.243272361189152 15.739967184462959 >50 2.3550942491013362 20.35823158492671 >100 1.789965426631948 38.002284656206626 >500 0.061749898997346675 4.958675438617538 >1k 0.016414530113218737 3.769376924635696 >5k 7.816442911056543E-4 0.6373776948888127 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 6735 0.6170956099625894 No Hit GCAGGAGGGATCAAGCAAGAGTACAATATGAAGATTCTTTTCTTGGCCCTTT 3962 0.3630189764917267 No Hit GCAGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3771 0.3455185664690311 No Hit GCAGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3611 0.33085853713064745 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3402 0.3117088738073837 No Hit GCAGGAGGATGCCAAATGTTAACTGCCAAGCTTGGAGTGACCTAAAGCCTTT 2604 0.23859197748219493 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 2318 0.21238717503983406 No Hit GCAGGAGGGGGTTAGGCTGGCCAGTACTTCTGGGTCTTGAGAACTGAGCCAA 2121 0.1943370139169491 No Hit GCAGGAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 1676 0.1535638073195694 No Hit GCAGGAGGGATTTCAGGGATCCTTAATATTTTGATTTGTTTTCCGAGATTGG 1528 0.14000328018156447 No Hit GCAGGAGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 1498 0.1372545246806175 No Hit GCAGGAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1450 0.1328565158791024 No Hit GCAGGAGGGACTTGTGAAACTCCGAGACGTGCCGTGGTCTCAGCAATGCACC 1391 0.1274506300605734 No Hit GCAGGAGGGATTCTCCTCCACCTCTGACATGCCCAGATATTTCTCTAGATCT 1327 0.12158661832521991 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGCT 1251 0.11462310438948767 No Hit GCAGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1217 0.11150784815508112 No Hit GCAGGAGAGGATGTTTCTGTGGGCCCCTTCACCCCTCCTCTGTCTGCACCTC 1165 0.10674333862010642 No Hit GCAGGAGGGGGTTTATTAAGTCCTGTGCCAGCACTTCGCTCATAAAGTTTTA 1164 0.10665171343674151 No Hit GCAGGAGGGGCCTTTTGTGACTGGCGGTGAACGAGTGCGCAGTGCCATGAAG 1162 0.10646846307001172 No Hit GCAGGAGGGATATTAAGGAAACAAACAAACTCATCTTACTGTGTGCTATTTT 1145 0.10491083495280844 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.006505388018907773 0.0 0.0 0.0 0.0 7 0.006505388018907773 0.0 0.0 0.0 0.0 8 0.006688638385637569 0.0 0.0 0.0 0.0 9 0.0071467643024620605 0.0 0.0 0.0 0.0 10 0.010903396820422887 0.0 0.0 0.0 0.0 11 0.01951616405672332 0.0 0.0 0.0 0.0 12 0.024922049875252313 0.0 0.0 0.0 0.0 13 0.028587057209848242 0.0 0.0 0.0 0.0 14 0.03655844816259438 0.0 0.0 0.0 0.0 15 0.044346588748610735 0.0 0.0 0.0 0.0 16 0.058181991436710365 0.0 0.0 0.0 0.0 17 0.06422925353879365 0.0 0.0 0.0 0.0 18 0.07027651564087693 0.0 0.0 0.0 0.0 19 0.08008041026092104 0.0 0.0 0.0 0.0 20 0.0865857982798288 0.0 0.0 0.0 0.0 21 0.09428231368248026 0.0 0.0 0.0 0.0 22 0.10124582761821252 0.0 0.0 0.0 0.0 23 0.10692658898683621 0.0 0.0 0.0 0.0 24 0.11553935622313664 0.0 0.0 0.0 0.0 25 0.11947923910782726 0.0 0.0 0.0 0.0 26 0.12415212345943707 0.0 0.0 0.0 0.0 27 0.13249001514564282 0.0 0.0 0.0 0.0 28 0.14091953201521346 0.0 0.0 0.0 0.0 29 0.14623379265037753 0.0 0.0 0.0 0.0 30 0.15108992736871715 0.0 0.0 0.0 0.0 31 0.1592445686881931 0.0 0.0 0.0 0.0 32 0.16410070340653268 0.0 0.0 0.0 0.0 33 0.1691400884916021 0.0 0.0 0.0 0.0 34 0.17784448091126742 0.0 0.0 0.0 0.0 35 0.1886562525483254 0.0 0.0 0.0 0.0 36 0.20203352931960056 0.0 0.0 0.0 0.0 37 0.209730044722252 0.0 0.0 0.0 0.0 38 0.21632705792452467 0.0 0.0 0.0 0.0 39 0.22246594520997284 0.0 0.0 0.0 0.0 40 0.23199496427992228 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAT 55 1.8189894E-12 46.000004 17 CGTCATA 55 1.8189894E-12 46.000004 36 TATTTCG 20 6.311314E-4 46.0 33 AGCGTTG 20 6.311314E-4 46.0 24 CTTCGCA 20 6.311314E-4 46.0 30 AATCCGG 30 1.8613155E-6 46.0 42 TCGCATC 30 1.8613155E-6 46.0 42 GATACGA 25 3.4170414E-5 46.0 26 CGTATTA 25 3.4170414E-5 46.0 22 CGTATAC 20 6.311314E-4 46.0 30 TACCACG 30 1.8613155E-6 46.0 36 CAAAACG 20 6.311314E-4 46.0 38 ACGCATG 30 1.8613155E-6 46.0 31 CTATCGC 25 3.4170414E-5 46.0 25 GCGCGTA 25 3.4170414E-5 46.0 30 TAGCGTT 20 6.311314E-4 46.0 23 ACCGATA 25 3.4170414E-5 46.0 30 ACCGAAA 20 6.311314E-4 46.0 44 TTCGTTA 25 3.4170414E-5 46.0 28 CATTCGG 20 6.311314E-4 46.0 31 >>END_MODULE