##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527261_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2810149 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4568231079562 34.0 31.0 34.0 31.0 34.0 2 32.88937027894251 34.0 31.0 34.0 31.0 34.0 3 32.455327101872534 34.0 31.0 34.0 31.0 34.0 4 36.337635833544766 37.0 37.0 37.0 35.0 37.0 5 35.98232584820236 37.0 35.0 37.0 35.0 37.0 6 36.20746408820315 37.0 37.0 37.0 35.0 37.0 7 36.53671638051932 37.0 37.0 37.0 35.0 37.0 8 36.653252549953756 37.0 37.0 37.0 35.0 37.0 9 38.698447662383735 39.0 39.0 39.0 39.0 39.0 10 38.18629795074923 39.0 39.0 39.0 37.0 39.0 11 37.91399993381134 39.0 38.0 39.0 35.0 39.0 12 37.38393480203363 39.0 37.0 39.0 35.0 39.0 13 37.22963052848799 39.0 37.0 39.0 34.0 39.0 14 38.04029074614905 40.0 38.0 40.0 34.0 40.0 15 38.05161327744543 40.0 38.0 40.0 34.0 40.0 16 37.814790603629916 40.0 37.0 40.0 34.0 40.0 17 37.920735163864975 40.0 38.0 40.0 34.0 40.0 18 37.92235607435762 40.0 38.0 40.0 34.0 40.0 19 37.721520460303 40.0 37.0 40.0 33.0 40.0 20 37.61144088800985 40.0 37.0 40.0 33.0 40.0 21 37.79688799419532 40.0 37.0 40.0 33.0 40.0 22 37.63897181252667 40.0 37.0 40.0 33.0 40.0 23 37.67310274295064 40.0 37.0 40.0 33.0 40.0 24 37.71697265874514 40.0 37.0 40.0 34.0 40.0 25 37.57951553458553 40.0 37.0 40.0 33.0 40.0 26 37.365164267090464 40.0 36.0 40.0 33.0 40.0 27 37.19143931513952 39.0 35.0 40.0 33.0 40.0 28 36.996248597494294 39.0 35.0 40.0 32.0 40.0 29 37.22041784972968 40.0 35.0 40.0 33.0 40.0 30 37.145032523186494 40.0 35.0 40.0 33.0 40.0 31 37.11916521152437 40.0 35.0 40.0 33.0 40.0 32 36.25051198352828 40.0 35.0 40.0 30.0 40.0 33 36.438121252645324 39.0 35.0 40.0 30.0 40.0 34 36.28141675049971 39.0 35.0 40.0 30.0 40.0 35 36.310899172962 39.0 35.0 40.0 30.0 40.0 36 36.08681603715675 39.0 35.0 40.0 30.0 40.0 37 35.89505787771396 39.0 35.0 40.0 29.0 40.0 38 35.666762153892904 39.0 35.0 40.0 28.0 40.0 39 35.57580968126601 39.0 35.0 40.0 28.0 40.0 40 35.2930317929761 38.0 35.0 40.0 27.0 40.0 41 35.16081709546362 38.0 35.0 40.0 26.0 40.0 42 34.99554044999037 38.0 35.0 40.0 26.0 40.0 43 34.85601154956552 38.0 34.0 40.0 25.0 40.0 44 34.690108602782274 37.0 34.0 40.0 24.0 40.0 45 34.620150034749045 37.0 34.0 40.0 24.0 40.0 46 34.25693868901613 37.0 34.0 40.0 23.0 40.0 47 34.182650813177524 36.0 34.0 40.0 23.0 40.0 48 34.048882817245634 36.0 33.0 40.0 23.0 40.0 49 33.71465819072227 35.0 33.0 40.0 22.0 40.0 50 33.26112458805565 35.0 33.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 15.0 15 26.0 16 137.0 17 317.0 18 750.0 19 1538.0 20 2368.0 21 3813.0 22 5904.0 23 8799.0 24 12832.0 25 18348.0 26 24781.0 27 32562.0 28 42333.0 29 52155.0 30 60970.0 31 67939.0 32 79425.0 33 101141.0 34 180100.0 35 221240.0 36 257508.0 37 424792.0 38 799995.0 39 410356.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.50319360290149 0.38410774659991337 0.058502236002432616 0.054196414496170846 8 99.14054379322947 0.6729892258382029 0.10647122270029097 0.0799957582320368 9 96.91051969130461 1.6364612694914045 0.5862678455839886 0.8667511936199823 10 57.9487778050203 28.359385925799664 5.599596320337462 8.09223994884257 11 35.165323973924515 27.68529355560862 18.390056897338898 18.75932557312797 12 31.5581842813317 18.462330645101023 25.42285124383084 24.55663382973643 13 24.11331214109999 18.621147846608846 27.384526585600977 29.881013426690185 14 24.04370729096571 22.14259813269688 29.60166880830874 24.21202576802867 15 28.227577968285665 18.65691107482201 27.709918584388234 25.405592372504092 16 29.74493523297163 20.077191636457712 26.32803456329184 23.849838567278816 17 33.60163464641911 20.831671203199544 21.424451158995485 24.142242991385864 18 31.342003573475996 20.75181778617433 21.905208585025207 26.00097005532447 19 28.504716297961423 22.55567231488437 23.97502765867575 24.964583728478456 20 29.063014096405563 24.497348717096497 22.193840967151566 24.245796219346378 21 30.525534411164674 21.494981226974087 24.89255907782826 23.086925284032983 22 30.460306553140065 21.11727883468101 22.160212857040676 26.26220175513825 23 29.584054083964944 24.866581807583866 21.158344272848165 24.39101983560302 24 29.773937253860915 23.69625240512158 20.811423166529604 25.7183871744879 25 27.652946516359094 20.853200310730855 21.591630906403893 29.90222226650615 26 29.963642497248365 21.371642571265795 21.26673710184051 27.39797782964533 27 27.69703670517115 19.859836613645754 22.329670063758186 30.113456617424912 28 28.36725027747639 25.104860987798155 20.28066839160486 26.2472203431206 29 32.651542676206844 22.34020331306276 19.64643155932301 25.361822451407377 30 28.734882029387055 23.992001847588863 21.97289182886744 25.300224294156642 31 33.699423055503466 22.42436255159424 19.826528771250207 24.04968562165209 32 33.367945970124715 22.3458613760338 21.809555294043125 22.47663735979836 33 34.70100695728234 21.069950383413833 21.115997763819642 23.11304489548419 34 30.2153017509036 22.787047946567956 23.872755501576606 23.124894800951836 35 28.555283011683724 28.63912198249986 22.684135254038132 20.121459751778286 36 31.092408267319634 26.498594914362194 20.29878131017252 22.110215508145654 37 30.18971591897796 26.236437996704087 21.24819715965239 22.32564892466556 38 32.78142902742879 26.14847113089021 19.76162118094094 21.308478660740054 39 30.679013817416802 24.007374697925272 19.924566277446498 25.38904520721143 40 29.173897896517232 23.608000856894066 21.8783416822382 25.3397595643505 41 28.89046096843975 23.898412504105654 20.85177689866267 26.35934962879192 42 27.901581019369438 22.611256556147023 21.572735111198728 27.91442731328481 43 26.624388955888108 22.61090070312998 23.96246604717401 26.80224429380791 44 26.612681391627273 21.171439663875475 23.71657161239493 28.49930733210232 45 27.563734164985558 24.02861912304294 22.47816752777166 25.929479184199845 46 28.173452724392906 23.06084125788348 23.7585266831047 25.00717933461891 47 27.85233096181021 22.143203082825856 23.406018684418513 26.598447270945417 48 29.927345489509634 21.81233094757609 23.55145581248539 24.708867750428894 49 28.93430206013987 22.678512776368798 23.77980669352408 24.60737846996725 50 25.872613872075824 23.175105661657085 24.202595663076938 26.74968480319015 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 18.0 6 36.0 7 74.0 8 112.0 9 370.5 10 629.0 11 8348.0 12 16067.0 13 14449.0 14 12831.0 15 12271.5 16 11712.0 17 10419.0 18 9126.0 19 8964.0 20 8802.0 21 9701.5 22 10601.0 23 11112.5 24 11624.0 25 13159.0 26 14694.0 27 17646.5 28 20599.0 29 22202.0 30 23805.0 31 23785.0 32 23765.0 33 26838.5 34 29912.0 35 29243.5 36 28575.0 37 35430.5 38 42286.0 39 41533.0 40 40780.0 41 42852.0 42 44924.0 43 49607.5 44 54291.0 45 56175.5 46 58060.0 47 66506.0 48 74952.0 49 86019.5 50 97087.0 51 97126.5 52 97166.0 53 118534.5 54 139903.0 55 172596.5 56 205290.0 57 232400.5 58 259511.0 59 269886.0 60 280261.0 61 272077.0 62 263893.0 63 265294.5 64 266696.0 65 238679.0 66 210662.0 67 176314.5 68 141967.0 69 123276.0 70 104585.0 71 90029.5 72 75474.0 73 61622.0 74 47770.0 75 48731.0 76 49692.0 77 34927.0 78 20162.0 79 13516.0 80 6870.0 81 5240.0 82 3610.0 83 2194.5 84 779.0 85 583.5 86 388.0 87 286.5 88 185.0 89 98.0 90 11.0 91 6.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2810149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.474611579946494 #Duplication Level Percentage of deduplicated Percentage of total 1 73.31010406950215 7.678948650134898 2 9.59535541938666 2.010152419792197 3 4.150637994845196 1.3042896241491415 4 2.2809543463310042 0.955684432376321 5 1.3441649754834317 0.7039803008778623 6 0.8766875845215892 0.5509777154895096 7 0.5828535725168051 0.4273615346068398 8 0.40296318600055586 0.3376706283498845 9 0.33892158236029774 0.3195064738156468 >10 2.918657069774799 7.445442892020636 >50 1.8296925853708148 14.16406369232684 >100 2.202025973454388 42.35996657693267 >500 0.1115579470255967 8.014489272332122 >1k 0.05080505230783544 9.461973147019881 >5k 0.003197520774619014 2.242788736009027 >10k+ 0.0014211203442751172 2.02270390376655 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGGACATGGGA 19855 0.7065461653456809 No Hit GGACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 13387 0.4763804339200519 No Hit GGACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11030 0.3925058778022091 No Hit GGACATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 10081 0.35873542648450313 No Hit GGACATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 9389 0.33411039770489037 No Hit GGACATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 9051 0.3220825657287211 No Hit GGACATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 7321 0.26051999377968926 No Hit GGACATGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCT 6194 0.22041535875855692 No Hit GGACATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 6004 0.2136541514346748 No Hit GGACATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 5924 0.2108073272983034 No Hit GGACATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 5695 0.2026582932079402 No Hit GGACATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5428 0.19315701765280063 No Hit GGACATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 5261 0.1872142722681253 No Hit GGACATGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTC 4954 0.1762895846448 No Hit GGACATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 4146 0.14753666086744865 No Hit GGACATGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 3955 0.1407398682418619 No Hit GGACATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 3834 0.13643404673560014 No Hit GGACATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 3755 0.13362280790093337 No Hit GGACATGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3750 0.13344488139241015 No Hit GGACATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 3659 0.13020661893728766 No Hit GGACATGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 3610 0.1284629391537602 No Hit GGACATGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 3569 0.1270039417838698 No Hit GGACATGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 3508 0.12483323837988662 No Hit GGACATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3312 0.11785851924577666 No Hit GGACATGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 3289 0.11704005730656987 No Hit GGACATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 3278 0.11664861898781881 No Hit GGACATGGGGACACTTGTGAAACTCCGAGACGTGCCGTGGTCTCAGCAAT 3030 0.1078234641650674 No Hit GGACATGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 2874 0.10227215709914313 No Hit GGACATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2834 0.10084874503095743 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.2026771534178434E-4 0.0 0.0 0.0 0.0 8 0.0014234120681857084 0.0 0.0 0.0 0.0 9 0.004412577411375696 0.0 0.0 0.0 0.0 10 0.033165501188727006 0.0 0.0 0.0 0.0 11 0.066829196601319 0.0 0.0 0.0 0.0 12 0.09116954296729461 0.0 0.0 0.0 0.0 13 0.11013650877586918 0.0 0.0 0.0 0.0 14 0.14903124353904365 0.0 0.0 0.0 0.0 15 0.17394095473229357 0.0 0.0 0.0 0.0 16 0.20176866066532415 0.0 0.0 0.0 0.0 17 0.21995274983639657 0.0 0.0 0.0 0.0 18 0.23742513297337614 0.0 0.0 0.0 0.0 19 0.2598082877455964 0.0 0.0 0.0 0.0 20 0.2827963926467956 0.0 0.0 0.0 0.0 21 0.30137192013661906 0.0 0.0 0.0 0.0 22 0.32126410378951437 0.0 0.0 0.0 0.0 23 0.34489274412139714 0.0 0.0 0.0 0.0 24 0.3716884763049931 0.0 0.0 0.0 0.0 25 0.3935378515516437 0.0 0.0 0.0 0.0 26 0.41734441839204967 0.0 0.0 0.0 0.0 27 0.44556356264383135 0.0 0.0 0.0 0.0 28 0.5175170426906189 0.0 0.0 0.0 0.0 29 0.5387258825065859 0.0 0.0 0.0 0.0 30 0.5690445595589415 0.0 0.0 0.0 0.0 31 0.5856984807567144 0.0 0.0 0.0 0.0 32 0.6021033048425546 0.0 0.0 0.0 0.0 33 0.6159815725073653 0.0 0.0 0.0 0.0 34 0.6367633887028766 0.0 0.0 0.0 0.0 35 0.7129871049542212 0.0 0.0 0.0 0.0 36 0.7330216298139351 0.0 0.0 0.0 0.0 37 0.7472557504957922 0.0 0.0 0.0 0.0 38 0.7606002386350332 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 20 7.858426E-4 44.000004 11 TAATTCG 20 7.858426E-4 44.000004 15 ATACGTT 20 7.858426E-4 44.000004 40 CAATCGC 20 7.858426E-4 44.000004 31 GGCGTAA 30 2.5290283E-6 44.0 25 CGCCTAT 25 4.444489E-5 44.0 22 CGTACGA 25 4.444489E-5 44.0 43 CGTAACC 30 2.5290283E-6 44.0 31 CCTATCG 35 1.4470788E-7 44.0 40 TATCGTC 35 1.4470788E-7 44.0 18 ATCGCTA 45 4.802132E-10 44.0 35 TAATCGA 205 0.0 42.92683 26 CGTATAG 135 0.0 42.370373 31 ATGGGGC 35325 0.0 41.814014 5 ATGGGCT 10265 0.0 41.771065 5 CATGGGG 168070 0.0 41.582317 4 ATGGGAG 27435 0.0 41.538177 5 ATGGGGT 23340 0.0 41.492714 5 ATGGGGG 63045 0.0 41.459595 5 TGGGATT 6570 0.0 41.42161 6 >>END_MODULE