##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527260_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3024091 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38802469899219 33.0 31.0 34.0 31.0 34.0 2 32.824060850020714 34.0 31.0 34.0 31.0 34.0 3 32.3415512297745 34.0 31.0 34.0 31.0 34.0 4 36.29583765832444 37.0 37.0 37.0 35.0 37.0 5 35.99968254923546 37.0 35.0 37.0 35.0 37.0 6 36.22836812781097 37.0 37.0 37.0 35.0 37.0 7 36.52047474761837 37.0 37.0 37.0 35.0 37.0 8 36.60408135866282 37.0 37.0 37.0 35.0 37.0 9 38.657262297993014 39.0 39.0 39.0 38.0 39.0 10 38.06317931570181 39.0 38.0 39.0 35.0 39.0 11 37.80970810732878 39.0 38.0 39.0 35.0 39.0 12 37.32393337369808 39.0 37.0 39.0 35.0 39.0 13 37.213988600210776 39.0 37.0 39.0 34.0 39.0 14 38.03248645626074 40.0 38.0 40.0 34.0 40.0 15 37.95620105347359 40.0 38.0 40.0 34.0 40.0 16 32.827604724857814 39.0 34.0 40.0 3.0 40.0 17 34.56978708643358 40.0 34.0 40.0 17.0 40.0 18 36.62480494138569 40.0 34.0 40.0 31.0 40.0 19 37.30235366594458 40.0 36.0 40.0 32.0 40.0 20 37.68384549274476 40.0 37.0 40.0 33.0 40.0 21 37.89627461607471 40.0 37.0 40.0 34.0 40.0 22 37.94521428091946 40.0 37.0 40.0 34.0 40.0 23 37.88561951343395 40.0 37.0 40.0 34.0 40.0 24 37.85690245432429 40.0 37.0 40.0 34.0 40.0 25 37.73961530919539 40.0 37.0 40.0 34.0 40.0 26 37.553037921147215 40.0 36.0 40.0 33.0 40.0 27 37.405041713361136 40.0 36.0 40.0 33.0 40.0 28 37.28396533040838 40.0 35.0 40.0 33.0 40.0 29 37.05664677418768 40.0 35.0 40.0 32.0 40.0 30 36.91320267809401 39.0 35.0 40.0 32.0 40.0 31 36.87373296636907 39.0 35.0 40.0 32.0 40.0 32 36.61997968976463 39.0 35.0 40.0 31.0 40.0 33 36.2985826154041 39.0 35.0 40.0 30.0 40.0 34 36.05346796772981 39.0 35.0 40.0 30.0 40.0 35 36.0033742370848 38.0 35.0 40.0 30.0 40.0 36 35.94016780579685 38.0 35.0 40.0 30.0 40.0 37 35.45876397238046 38.0 35.0 40.0 28.0 40.0 38 35.44075161759352 38.0 35.0 40.0 28.0 40.0 39 35.00568402207473 38.0 34.0 40.0 26.0 40.0 40 34.81311508152367 38.0 34.0 40.0 25.0 40.0 41 34.76495284037418 37.0 34.0 40.0 26.0 40.0 42 34.64532912534709 37.0 34.0 40.0 25.0 40.0 43 34.493263264895134 37.0 34.0 40.0 25.0 40.0 44 34.721557320861045 37.0 34.0 40.0 26.0 40.0 45 34.83969662288602 37.0 34.0 40.0 26.0 40.0 46 34.71511604644172 37.0 34.0 40.0 26.0 40.0 47 34.41394587662871 36.0 34.0 40.0 24.0 40.0 48 34.35287661647748 36.0 34.0 40.0 24.0 40.0 49 34.24146528659356 36.0 34.0 40.0 25.0 40.0 50 33.695157652332554 35.0 33.0 40.0 23.0 40.0 51 33.74539754260041 35.0 33.0 39.0 23.0 40.0 52 33.35539274446437 35.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 1.0 13 0.0 14 4.0 15 39.0 16 130.0 17 323.0 18 780.0 19 1361.0 20 2499.0 21 4173.0 22 6951.0 23 10645.0 24 15929.0 25 22485.0 26 30546.0 27 39903.0 28 50087.0 29 57893.0 30 64939.0 31 75804.0 32 95215.0 33 137277.0 34 207776.0 35 266787.0 36 353901.0 37 555967.0 38 704869.0 39 317805.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.52382385318431 0.3711859200004233 0.05181722375417935 0.05317300306108513 8 99.12872992247918 0.6737892477441981 0.11911017227986857 0.07837065749674861 9 96.9336240212348 1.6207514919359238 0.5745858838242632 0.8710386030050022 10 58.02907386054189 28.371765267645717 5.507407019167082 8.091753852645308 11 35.19771726446063 27.80885231297603 18.252559198780723 18.74087122378262 12 31.786841070589478 18.300705898069864 25.304066577361596 24.608386453979065 13 24.255321681788015 18.48287634201484 27.199479116203847 30.0623228599933 14 24.139782830609263 22.16894266739989 29.38003519073996 24.311239311250883 15 28.44259646948455 18.70535641949928 27.570598900628323 25.281448210387847 16 28.245148707495904 27.795922807878465 23.32373595900388 20.635192525621747 17 33.82986821494459 20.710719353352793 21.36959502872103 24.089817402981588 18 31.54432191359321 20.55073739513791 21.980191733648226 25.924748957620654 19 28.62142706684422 22.327998727551517 24.089685131829697 24.960889073774567 20 29.107060601020272 24.40597852379442 22.130054948743275 24.35690592644203 21 30.592134958901703 21.340495375304513 24.896109277134848 23.17126038865894 22 30.28662166581627 21.057534313616884 22.118977239772217 26.536866780794625 23 29.645867138257415 24.818366907609594 21.15091774685352 24.38484820727948 24 29.916427779455052 23.612880697042517 20.78687446905533 25.683817054447104 25 27.78444828545173 20.64507979422577 21.541117644938595 30.029354275383906 26 30.099127308007596 21.097612472640538 21.23411630139437 27.569143917957494 27 27.776512016338135 19.68988367082869 22.26100338911759 30.272600923715586 28 28.582208670307875 24.991939726681505 20.159082514382007 26.266769088628617 29 32.978339606843846 22.251049984937623 19.464162950122862 25.306447458095672 30 28.833391587753148 24.044183855578417 21.91253503945483 25.2098895172136 31 33.850568650215884 22.221818060369213 19.792757559213662 24.13485573020124 32 33.543038222064084 22.00479416790037 21.901258923755933 22.550908686279612 33 35.11997489493537 20.85717658628659 21.123901364079323 22.898947154698718 34 30.283579429322728 22.591780472214626 23.8276229121412 23.29701718632144 35 28.672880544930692 28.56620386092879 22.64892160983251 20.111993984308015 36 31.29122106444548 26.40948966152143 20.244132865049366 22.055156408983727 37 30.35398074991791 26.157281642648982 21.203230987427297 22.285506620005812 38 32.894380493179604 26.035393776179355 19.732474981738314 21.337750748902728 39 30.909056638837917 23.992631174128025 19.880188790615097 25.218123396418957 40 29.154876622429683 23.656497109379316 21.925762154644158 25.262864113546847 41 29.050779225889695 23.88949274343927 20.851422791179232 26.208305239491803 42 28.134768431240992 22.58414181319279 21.47627171272293 27.804818042843287 43 26.662788917396995 22.683841193932324 23.940913153737768 26.71245673493291 44 26.47701408456293 21.183919399250883 23.692772472786036 28.64629404340015 45 27.481878025495927 24.154696402985227 22.361099583312804 26.002325988206042 46 27.85445279259123 23.030027866224927 23.97689090705273 25.138628434131117 47 28.103750846122022 22.21579972295807 23.344171851971385 26.33627757894852 48 30.07958424531537 21.87027440642494 23.508088876955092 24.5420524713046 49 28.973003788576467 22.64802877955723 23.811320492670358 24.567646939195946 50 25.825710932640582 23.262692822405146 24.118784785246213 26.79281145970806 51 25.71417328380661 24.485539621658212 23.473070089491355 26.327217005043828 52 28.192868534710097 22.82027888711021 23.30197735451744 25.684875223662253 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 17.5 6 35.0 7 77.0 8 119.0 9 361.0 10 603.0 11 8345.5 12 16088.0 13 14641.5 14 12687.5 15 12180.0 16 10697.0 17 9214.0 18 8712.0 19 8210.0 20 9129.0 21 10048.0 22 10034.0 23 10020.0 24 11449.0 25 12878.0 26 15204.5 27 17531.0 28 19347.5 29 21164.0 30 21805.0 31 22446.0 32 25204.5 33 27963.0 34 29914.5 35 31866.0 36 34094.5 37 36323.0 38 39439.5 39 42543.0 40 42530.0 41 47748.5 42 52967.0 43 54019.0 44 55071.0 45 59552.5 46 64034.0 47 72016.0 48 79998.0 49 89043.0 50 98088.0 51 99191.0 52 100294.0 53 123457.5 54 146621.0 55 182384.0 56 218147.0 57 234753.5 58 251360.0 59 282501.5 60 313643.0 61 291188.0 62 268733.0 63 270658.5 64 255060.0 65 237536.0 66 201835.0 67 166134.0 68 140585.0 69 115036.0 70 102926.0 71 90816.0 72 75058.5 73 59301.0 74 57514.0 75 55727.0 76 41264.5 77 26802.0 78 18433.0 79 10064.0 80 7091.0 81 4118.0 82 2835.0 83 1552.0 84 901.0 85 250.0 86 223.5 87 197.0 88 109.5 89 16.0 90 10.0 91 8.0 92 6.0 93 8.5 94 11.0 95 5.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3024091.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.2036629993827 #Duplication Level Percentage of deduplicated Percentage of total 1 75.45357950770628 9.208100564091758 2 9.239507300373205 2.2551166674818166 3 3.9246639111980097 1.4368582727429924 4 2.0552239825062677 1.003250434830228 5 1.2337671938498183 0.7528239526718625 6 0.7506842383325601 0.5496658478135309 7 0.5155355941305111 0.44039958584687067 8 0.36498503718971265 0.3563323514944332 9 0.2648979213139154 0.2909452464856817 >10 2.5755102753288015 7.722658713731893 >50 1.6472769692967106 14.769987371635619 >100 1.8328976008545075 40.38143324313279 >500 0.09638647264856831 7.973958918837999 >1k 0.04135290600728899 8.932617363208411 >5k 0.002798316947861661 2.3094315281282705 >10k+ 9.327723159538869E-4 1.6164199378658044 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGGACATGGGAAG 19018 0.6288831916764409 No Hit GGACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 12504 0.4134796208182889 No Hit GGACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11078 0.36632495516834646 No Hit GGACATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 9409 0.3111348170408893 No Hit GGACATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 8897 0.29420410959855375 No Hit GGACATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8632 0.2854411457856261 No Hit GGACATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6460 0.21361791030759325 No Hit GGACATGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 5622 0.1859071039859581 No Hit GGACATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5592 0.18491507034675875 No Hit GGACATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5479 0.18117841030577453 No Hit GGACATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 5406 0.17876446178372277 No Hit GGACATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 5367 0.17747481805276363 No Hit GGACATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4962 0.1640823639235724 No Hit GGACATGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTC 4313 0.14262136952889315 No Hit GGACATGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 3961 0.13098150816228746 No Hit GGACATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3839 0.1269472380295434 No Hit GGACATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 3654 0.12082969725448077 No Hit GGACATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3641 0.1203998160108277 No Hit GGACATGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3623 0.11980459582730811 No Hit GGACATGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 3559 0.11768825739701615 No Hit GGACATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 3409 0.1127280892010194 No Hit GGACATGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 3299 0.10909063252395515 No Hit GGACATGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 3282 0.10852848012840882 No Hit GGACATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 3233 0.10690815851771655 No Hit GGACATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3152 0.10422966769187833 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 4.2988124365305147E-4 0.0 0.0 0.0 0.0 8 0.0014880504587990243 0.0 0.0 0.0 0.0 9 0.00459642252829032 0.0 0.0 0.0 0.0 10 0.030157822631660225 0.0 0.0 0.0 0.0 11 0.05638057849449636 0.0 0.0 0.0 0.0 12 0.07645272579429653 0.0 0.0 0.0 0.0 13 0.09401172120812502 0.0 0.0 0.0 0.0 14 0.12780700051684954 0.0 0.0 0.0 0.0 15 0.1492349271235555 0.0 0.0 0.0 0.0 16 0.18064932569820155 0.0 0.0 0.0 0.0 17 0.20108521866570814 0.0 0.0 0.0 0.0 18 0.21950397656684273 0.0 0.0 0.0 0.0 19 0.2412625810532818 0.0 0.0 0.0 0.0 20 0.2622606264163347 0.0 0.0 0.0 0.0 21 0.27948894395043006 0.0 0.0 0.0 0.0 22 0.2977092951237248 0.0 0.0 0.0 0.0 23 0.32085674670504294 0.0 0.0 0.0 0.0 24 0.3458229266248932 0.0 0.0 0.0 0.0 25 0.3655974638329336 0.0 0.0 0.0 0.0 26 0.38821583080667876 0.0 0.0 0.0 0.0 27 0.413810298698022 0.0 0.0 0.0 0.0 28 0.48146699289141764 0.0 0.0 0.0 0.0 29 0.4974718022705005 0.0 0.0 0.0 0.0 30 0.5272989470224275 0.0 0.0 0.0 0.0 31 0.5424770617021776 0.0 0.0 0.0 0.0 32 0.5572914307142213 0.0 0.0 0.0 0.0 33 0.5705516136915192 0.0 0.0 0.0 0.0 34 0.5896647951400933 0.0 0.0 0.0 0.0 35 0.6606282681308201 0.0 0.0 0.0 0.0 36 0.6802705341869673 0.0 0.0 0.0 0.0 37 0.694456615227518 0.0 0.0 0.0 0.0 38 0.7069893068694031 0.0 0.0 0.0 0.0 39 0.719389727359395 0.0 0.0 0.0 0.0 40 0.732550706972773 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 25 3.418488E-5 46.0 11 CGTCTAT 20 6.313097E-4 46.0 15 CACGATT 20 6.313097E-4 46.0 12 TTATCCG 20 6.313097E-4 46.0 14 CGCCTAT 45 3.110472E-10 46.0 22 CCGTAAA 25 3.418488E-5 46.0 42 AATTCGC 20 6.313097E-4 46.0 38 ACGCTAA 65 0.0 46.0 18 TCATATC 20 6.313097E-4 46.0 16 ATAACGT 50 1.6370905E-11 46.0 38 CGCACTA 30 1.8624178E-6 46.0 37 TACGTAT 30 1.8624178E-6 46.0 30 CGTATAG 140 0.0 44.357143 31 ATGGGCT 10565 0.0 43.3876 5 ATGGGGC 37030 0.0 43.36646 5 ATGGGAG 30165 0.0 43.35422 5 CATGGGG 180970 0.0 43.276398 4 ATGGGGG 68850 0.0 43.193897 5 CTCATAA 245 0.0 43.183674 45 ATGGGGT 25015 0.0 43.14052 5 >>END_MODULE