##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527259_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2932954 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.388760273771766 33.0 31.0 34.0 31.0 34.0 2 32.82473642614238 34.0 31.0 34.0 31.0 34.0 3 32.34847529146383 34.0 31.0 34.0 31.0 34.0 4 36.30511763907651 37.0 37.0 37.0 35.0 37.0 5 36.02110875247276 37.0 35.0 37.0 35.0 37.0 6 36.227984823491944 37.0 37.0 37.0 35.0 37.0 7 36.527189311526875 37.0 37.0 37.0 35.0 37.0 8 36.63013091920296 37.0 37.0 37.0 35.0 37.0 9 38.60550318893512 39.0 39.0 39.0 38.0 39.0 10 38.05928255267556 39.0 38.0 39.0 35.0 39.0 11 37.742516589077084 39.0 38.0 39.0 35.0 39.0 12 37.28601641894145 39.0 37.0 39.0 35.0 39.0 13 37.12346630734747 39.0 37.0 39.0 34.0 39.0 14 37.95951624198675 40.0 38.0 40.0 34.0 40.0 15 38.06772455347066 40.0 38.0 40.0 34.0 40.0 16 38.009397692565244 40.0 38.0 40.0 34.0 40.0 17 38.02450771474766 40.0 38.0 40.0 34.0 40.0 18 38.037754768741685 40.0 38.0 40.0 34.0 40.0 19 37.8245679952703 40.0 37.0 40.0 34.0 40.0 20 37.92083067105723 40.0 37.0 40.0 34.0 40.0 21 33.705580448926234 40.0 34.0 40.0 10.0 40.0 22 34.49871290173661 39.0 34.0 40.0 17.0 40.0 23 36.48377301519219 39.0 34.0 40.0 30.0 40.0 24 37.24425374554119 39.0 36.0 40.0 32.0 40.0 25 37.450771474765716 39.0 36.0 40.0 33.0 40.0 26 37.432886775585295 40.0 36.0 40.0 33.0 40.0 27 37.36344143140329 40.0 36.0 40.0 33.0 40.0 28 37.24557528007599 40.0 35.0 40.0 33.0 40.0 29 37.21266716082148 40.0 35.0 40.0 33.0 40.0 30 36.98125303022141 39.0 35.0 40.0 32.0 40.0 31 36.846792005602545 39.0 35.0 40.0 32.0 40.0 32 36.62112327707833 39.0 35.0 40.0 31.0 40.0 33 36.32144384126038 39.0 35.0 40.0 30.0 40.0 34 36.05803568688769 39.0 35.0 40.0 30.0 40.0 35 36.00502564990791 38.0 35.0 40.0 30.0 40.0 36 35.877590988471006 38.0 35.0 40.0 30.0 40.0 37 35.60606167024781 38.0 35.0 40.0 29.0 40.0 38 35.515582242339974 38.0 35.0 40.0 28.0 40.0 39 35.29067758989742 38.0 34.0 40.0 28.0 40.0 40 30.435294246005903 36.0 26.0 40.0 8.0 40.0 41 31.30445789466865 35.0 26.0 40.0 12.0 40.0 42 32.95448479587474 35.0 30.0 40.0 21.0 40.0 43 33.74153396200554 36.0 32.0 40.0 23.0 40.0 44 34.4201474008798 37.0 33.0 40.0 25.0 40.0 45 34.71067974472153 37.0 34.0 40.0 26.0 40.0 46 34.66938451813428 37.0 34.0 40.0 26.0 40.0 47 34.60611622275699 36.0 34.0 40.0 26.0 40.0 48 34.45749677628766 36.0 34.0 40.0 25.0 40.0 49 34.285075729111334 36.0 34.0 40.0 25.0 40.0 50 34.10688541313638 35.0 34.0 40.0 24.0 40.0 51 33.91867823361703 35.0 34.0 39.0 24.0 40.0 52 33.47467433856787 35.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 10.0 15 38.0 16 130.0 17 396.0 18 807.0 19 1513.0 20 2697.0 21 4439.0 22 7203.0 23 10784.0 24 15778.0 25 22580.0 26 31297.0 27 40857.0 28 50843.0 29 59985.0 30 67643.0 31 83641.0 32 110930.0 33 128022.0 34 231031.0 35 301597.0 36 364972.0 37 391269.0 38 678212.0 39 326279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.53255318699168 0.3672065773960314 0.04950640207790507 0.05073383353438206 8 99.15419744053266 0.6698366220540793 0.10194500152406072 0.0740209358892093 9 96.86841321070838 1.6261762032408282 0.6293313839903387 0.8760792020604483 10 58.016661700115314 28.378590322248492 5.511371811491077 8.093376166145122 11 35.25565010566139 27.797435622924876 18.245632219257445 18.70128205215629 12 31.74304813508838 18.392071611078798 25.31290978310604 24.551970470726783 13 24.391927046929478 18.53441956471189 27.20141536485059 29.87223802350804 14 24.151930101869993 22.194449691335084 29.37403723345133 24.279582973343597 15 28.326526771302923 18.642672200109516 27.67254447222834 25.358256556359223 16 29.65078893156865 19.985720880722983 26.49386932082808 23.869620866880283 17 33.81969168285626 20.825761331408536 21.309880755034 24.044666230701196 18 31.487606010868223 20.665786098247704 21.94715634817321 25.899451542710867 19 28.58070736874837 22.434037492575744 24.059395408178922 24.925859730496967 20 29.04505150779726 24.472630665192842 22.16570733806258 24.316610488947322 21 34.86089451113109 20.56997825400603 23.624373242812535 20.944753992050337 22 30.41012576399084 21.122629267284793 22.06325090676499 26.403994061959374 23 29.69115778835945 24.86257881985193 21.062553316553892 24.38371007523473 24 30.022257423744115 23.699144275702928 20.757502504301126 25.521095796251835 25 27.87169522604173 20.69858579439023 21.481755254259017 29.947963725309023 26 30.05843255639195 21.20254869322874 21.20554908123346 27.53346966914585 27 27.73490480928102 19.77777353480484 22.29694021795091 30.190381437963225 28 28.51630131260156 25.1034281478673 20.146002971747937 26.2342675677832 29 32.84732730209884 22.389133958459627 19.409203144679392 25.35433559476214 30 28.833115009645567 24.112890962490376 21.880806858886977 25.17318716897708 31 33.87540343285302 22.342627944386447 19.68343178924729 24.098536833513243 32 33.47488572954093 22.111223019522296 21.85857671139745 22.555314539539317 33 35.03805378468261 20.960540124393358 21.121538217101257 22.879867873822775 34 30.300031981408505 22.727052657491388 23.784007522791015 23.18890783830909 35 28.727249046524427 28.60276703964672 22.600286264291906 20.069697649536952 36 31.37100002250291 26.43447527646189 20.212284270397696 21.982240430637507 37 30.29924778908909 26.273920422891052 21.151746669057886 22.275085118961975 38 32.80123043184448 26.13453876194444 19.724107503902207 21.340123302308868 39 30.62874494451669 24.119062215091 19.89622067035487 25.355972170037443 40 29.307858220756277 28.037227996074947 20.20365815488412 22.45125562828466 41 29.08412474249511 23.938561600352408 20.773459113235326 26.203854543917153 42 28.035898278663762 22.660157643113394 21.453081091622987 27.850862986599857 43 26.707510584891548 22.777172775297533 23.808522056602317 26.706794583208605 44 26.474366798797387 21.25222557189782 23.654615790087398 28.61879183921739 45 27.41826158882819 24.298164921781932 22.35636835763534 25.927205131754537 46 27.840804867720394 23.155664903029503 23.955063734378378 25.048466494871725 47 27.928361644949085 22.348969673578242 23.276362329583076 26.446306351889596 48 29.98584362386863 21.987763872191653 23.517688992053746 24.50870351188597 49 28.95135757328618 22.780650497757552 23.779881989284522 24.488109939671745 50 25.724542560162895 23.32426625170391 24.1408832187617 26.810307969371493 51 25.756319396758354 24.56404021338214 23.39515041831546 26.284489971544044 52 28.16443762841149 22.985631550989208 23.204830351925057 25.645100468674244 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 11.0 6 22.0 7 64.0 8 106.0 9 337.5 10 569.0 11 7571.5 12 14574.0 13 13662.5 14 12478.5 15 12206.0 16 10752.5 17 9299.0 18 8678.5 19 8058.0 20 8993.0 21 9928.0 22 9782.0 23 9636.0 24 10985.5 25 12335.0 26 14646.0 27 16957.0 28 18867.5 29 20778.0 30 21415.0 31 22052.0 32 24434.5 33 26817.0 34 28982.0 35 31147.0 36 33156.5 37 35166.0 38 38124.0 39 41188.0 40 41294.0 41 46357.5 42 51421.0 43 52536.5 44 53652.0 45 58259.0 46 62866.0 47 69990.0 48 77114.0 49 85969.5 50 94825.0 51 96150.5 52 97476.0 53 119785.0 54 142094.0 55 175098.0 56 208102.0 57 224239.0 58 240376.0 59 273208.0 60 306040.0 61 281871.0 62 257702.0 63 261462.0 64 247906.5 65 230591.0 66 196691.0 67 162791.0 68 138201.0 69 113611.0 70 101666.5 71 89722.0 72 73290.0 73 56858.0 74 55474.0 75 54090.0 76 40464.0 77 26838.0 78 18644.0 79 10450.0 80 7375.0 81 4300.0 82 2931.0 83 1562.0 84 892.0 85 222.0 86 221.5 87 221.0 88 117.5 89 11.5 90 9.0 91 7.0 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2932954.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.280258247700429 #Duplication Level Percentage of deduplicated Percentage of total 1 75.55040142771247 9.277784402497446 2 9.172464854535596 2.252804743633061 3 3.8433555388798974 1.4159219566552497 4 2.064045669366641 1.013880554194802 5 1.1868839815991885 0.7287620902048481 6 0.7307974494740193 0.5384628843781057 7 0.50732045211998 0.4361018316461447 8 0.35146422903361374 0.34528571978893663 9 0.27365817084382904 0.30245337085999907 >10 2.6563833865505737 8.118390858954736 >50 1.7164220572872475 15.413329084627472 >100 1.8066407153295967 39.712412077724785 >500 0.0976301296137799 8.075915050192496 >1k 0.038987609515733886 8.613135523668554 >5k 0.0025776931911229016 2.160435873299903 >10k+ 9.666349466710882E-4 1.594923977673489 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGGACATGGGAAG 18279 0.6232283220261893 No Hit GGACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 11946 0.40730267164094625 No Hit GGACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10083 0.3437830937682623 No Hit GGACATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 9772 0.33317944979703057 No Hit GGACATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 8800 0.300038800472152 No Hit GGACATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8174 0.2786951312567466 No Hit GGACATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6356 0.21670984270465882 No Hit GGACATGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 5653 0.19274083398512215 No Hit GGACATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5497 0.18742196434038855 No Hit GGACATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 5204 0.17743203609739533 No Hit GGACATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5144 0.175386317003267 No Hit GGACATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4968 0.16938554099382397 No Hit GGACATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 4645 0.15837275320376656 No Hit GGACATGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTC 4192 0.14292757404309786 No Hit GGACATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3804 0.12969859056773478 No Hit GGACATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3562 0.1214475235547506 No Hit GGACATGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 3484 0.11878808873238379 No Hit GGACATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 3441 0.11732199004825851 No Hit GGACATGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 3425 0.11677646495649097 No Hit GGACATGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 3347 0.11411703013412416 No Hit GGACATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 3268 0.11142349999352189 No Hit GGACATGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3195 0.10893454176233244 No Hit GGACATGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 3148 0.10733206180526526 No Hit GGACATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3126 0.10658196480408488 No Hit GGACATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 3052 0.10405891125465998 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.7504850059018996E-4 0.0 0.0 0.0 0.0 8 0.0017388612300090625 0.0 0.0 0.0 0.0 9 0.00487563050767247 0.0 0.0 0.0 0.0 10 0.031333597458398595 0.0 0.0 0.0 0.0 11 0.05881442395618888 0.0 0.0 0.0 0.0 12 0.08148781058277764 0.0 0.0 0.0 0.0 13 0.09966061520228411 0.0 0.0 0.0 0.0 14 0.13576755721364878 0.0 0.0 0.0 0.0 15 0.15837275320376656 0.0 0.0 0.0 0.0 16 0.18725148774921122 0.0 0.0 0.0 0.0 17 0.20365133582047315 0.0 0.0 0.0 0.0 18 0.2191988009358483 0.0 0.0 0.0 0.0 19 0.24026970760536986 0.0 0.0 0.0 0.0 20 0.2635909052784326 0.0 0.0 0.0 0.0 21 0.28033170653204925 0.0 0.0 0.0 0.0 22 0.3007207068368614 0.0 0.0 0.0 0.0 23 0.3258830516946396 0.0 0.0 0.0 0.0 24 0.35206825609948195 0.0 0.0 0.0 0.0 25 0.37460526145312883 0.0 0.0 0.0 0.0 26 0.397960554444427 0.0 0.0 0.0 0.0 27 0.4237707103486792 0.0 0.0 0.0 0.0 28 0.49110896386373604 0.0 0.0 0.0 0.0 29 0.5090431012555942 0.0 0.0 0.0 0.0 30 0.5360806886163233 0.0 0.0 0.0 0.0 31 0.5504689129116924 0.0 0.0 0.0 0.0 32 0.5643798027517649 0.0 0.0 0.0 0.0 33 0.5756653530877062 0.0 0.0 0.0 0.0 34 0.5926789168872065 0.0 0.0 0.0 0.0 35 0.6570849730340128 0.0 0.0 0.0 0.0 36 0.6731779632411555 0.0 0.0 0.0 0.0 37 0.6859978028976929 0.0 0.0 0.0 0.0 38 0.6976584017342242 0.0 0.0 0.0 0.0 39 0.7115692915742967 0.0 0.0 0.0 0.0 40 0.7268098988255527 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAC 35 1.02028935E-7 46.000004 11 TTAATCG 25 3.418462E-5 46.0 34 CGCATAT 20 6.313064E-4 46.0 39 CGAATTA 25 3.418462E-5 46.0 34 CGTGTAA 45 3.110472E-10 46.0 31 GCGTAAA 20 6.313064E-4 46.0 23 ATGGGGC 36830 0.0 43.539505 5 ATGGGCT 10510 0.0 43.48335 5 ATGGGGT 24840 0.0 43.37963 5 CATGGGG 176640 0.0 43.295574 4 TGGGATT 6945 0.0 43.284374 6 ATGGGAG 29465 0.0 43.283558 5 ATGGGGG 66495 0.0 43.225956 5 ATGGGAT 17525 0.0 43.15207 5 ACATGGG 302115 0.0 42.881714 3 GGACATG 313625 0.0 42.834084 1 CGTATAG 145 0.0 42.827587 31 TGGGGGG 29380 0.0 42.75119 6 GACATGG 312355 0.0 42.71591 2 ATGGGAC 12565 0.0 42.503784 5 >>END_MODULE