##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527256_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1856580 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48254747977464 34.0 31.0 34.0 31.0 34.0 2 32.6810705706191 34.0 31.0 34.0 31.0 34.0 3 32.88221245515949 34.0 31.0 34.0 31.0 34.0 4 36.330360663154835 37.0 37.0 37.0 35.0 37.0 5 36.35591463874436 37.0 37.0 37.0 35.0 37.0 6 36.35495696387982 37.0 37.0 37.0 35.0 37.0 7 36.506282519471284 37.0 37.0 37.0 35.0 37.0 8 36.634403042152776 37.0 37.0 37.0 35.0 37.0 9 38.56147809413007 39.0 39.0 39.0 38.0 39.0 10 38.03427215633046 39.0 38.0 39.0 37.0 39.0 11 37.78599791013584 39.0 38.0 39.0 35.0 39.0 12 37.4310641071217 39.0 37.0 39.0 35.0 39.0 13 37.333355416949445 39.0 37.0 39.0 35.0 39.0 14 38.18761432311023 40.0 38.0 40.0 35.0 40.0 15 38.241949175365455 40.0 38.0 40.0 35.0 40.0 16 38.20337125251807 40.0 38.0 40.0 35.0 40.0 17 38.1371473354232 40.0 38.0 40.0 34.0 40.0 18 38.14775770502752 40.0 38.0 40.0 34.0 40.0 19 38.05202630643441 40.0 38.0 40.0 34.0 40.0 20 38.07133815941139 40.0 38.0 40.0 34.0 40.0 21 33.72674649085954 40.0 34.0 40.0 10.0 40.0 22 34.42669370563078 40.0 34.0 40.0 16.0 40.0 23 36.58224746577039 40.0 34.0 40.0 30.0 40.0 24 37.430122591000654 40.0 36.0 40.0 33.0 40.0 25 37.685782998847344 40.0 37.0 40.0 34.0 40.0 26 37.75993978174924 40.0 37.0 40.0 34.0 40.0 27 37.71385612254791 40.0 37.0 40.0 34.0 40.0 28 37.628506716651046 40.0 36.0 40.0 34.0 40.0 29 37.58950543472406 40.0 36.0 40.0 34.0 40.0 30 37.4890745348975 40.0 36.0 40.0 33.0 40.0 31 37.32624395393681 40.0 35.0 40.0 33.0 40.0 32 37.18567150351722 39.0 35.0 40.0 33.0 40.0 33 36.81588889247972 39.0 35.0 40.0 32.0 40.0 34 36.661247562722856 39.0 35.0 40.0 31.0 40.0 35 36.651783386657186 39.0 35.0 40.0 31.0 40.0 36 36.618314319878486 39.0 35.0 40.0 32.0 40.0 37 36.48107218649344 39.0 35.0 40.0 31.0 40.0 38 36.369738443805275 38.0 35.0 40.0 31.0 40.0 39 36.20869448125047 38.0 35.0 40.0 31.0 40.0 40 31.318059011731247 37.0 31.0 40.0 8.0 40.0 41 32.166155511747405 36.0 31.0 40.0 13.0 40.0 42 33.95595665147745 36.0 31.0 40.0 23.0 40.0 43 34.76535242219565 36.0 33.0 40.0 28.0 40.0 44 35.44934826401232 37.0 34.0 40.0 30.0 40.0 45 35.58843734177897 37.0 35.0 40.0 30.0 40.0 46 35.54518361718859 37.0 35.0 40.0 30.0 40.0 47 35.46605371166338 37.0 35.0 40.0 30.0 40.0 48 35.29797530943994 36.0 35.0 40.0 30.0 40.0 49 35.185355869394265 36.0 35.0 40.0 30.0 40.0 50 35.0592067134193 36.0 35.0 40.0 29.0 40.0 51 34.875981105042605 36.0 34.0 40.0 29.0 40.0 52 34.505285524997575 35.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 9.0 15 21.0 16 37.0 17 99.0 18 185.0 19 434.0 20 794.0 21 1513.0 22 2622.0 23 4037.0 24 5504.0 25 8033.0 26 11322.0 27 15946.0 28 21403.0 29 29274.0 30 36773.0 31 46626.0 32 65615.0 33 76156.0 34 144430.0 35 195995.0 36 233714.0 37 258037.0 38 443374.0 39 254625.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.14337114479311 0.4765213457001583 0.05289295371058613 0.3272145557961413 8 99.15796787641793 0.554244901916427 0.13831884432666516 0.1494683773389781 9 92.68596020640102 4.41769274687867 1.500770233439981 1.3955768132803326 10 42.04338084003921 40.07255275829751 6.155888784754764 11.72817761690851 11 31.407965183294014 19.195025261502334 28.553900182055177 20.843109373148476 12 29.06613235088173 14.185168427969707 29.463152678581046 27.285546542567516 13 23.254640252507297 14.912635060164389 33.13248015167674 28.700244535651574 14 22.519255835999527 19.67887190425406 33.424091609303126 24.377780650443288 15 27.403074470262528 20.219381874198795 29.74582296480626 22.631720690732422 16 29.701548007626926 21.69650647965614 27.515808637387025 21.08613687532991 17 29.730256708571673 21.206250201984293 25.679367439054605 23.384125650389425 18 28.948065798403515 21.954346163375668 26.456172101390727 22.641415936830086 19 26.4852039772054 22.68655269366254 28.01392883689364 22.814314492238417 20 27.963351969750832 23.08820519449741 26.63241013045492 22.316032705296838 21 31.084467138501974 20.93494489868468 27.392140387163494 20.58844757564985 22 25.485570242057975 20.303030303030305 29.99218994064355 24.21920951426817 23 27.0632022320611 22.72457960335671 27.054422648094885 23.157795516487305 24 26.467537084316323 21.854431266091414 26.6966680670911 24.98136358250116 25 24.96504325157009 23.588533755615163 24.357636083551476 27.08878690926327 26 24.64396901830247 23.090359693630226 26.033513234010925 26.23215805405638 27 21.715681521938187 22.04009522886167 25.97033254694115 30.273890702258992 28 24.509528272414872 24.512167533852566 25.8344375141389 25.143866679593664 29 27.49814174449795 21.793728253024376 25.658630384901272 25.049499617576405 30 26.020424651779077 23.11292807204645 26.701300240226654 24.165347035947818 31 30.052785228753947 21.117215525320752 25.82792015426214 23.002079091663166 32 29.996660526344137 21.292214717383576 27.317756304603087 21.393368451669197 33 29.07841299593877 21.52646263559879 27.126059744260957 22.26906462420149 34 24.241616305249437 23.46680455461117 30.456969266069873 21.834609874069525 35 23.934654041301748 27.949670900257463 28.264874123388168 19.85080093505262 36 25.671611242176475 28.472729427226405 25.96451539928255 19.891143931314566 37 27.335638647405446 27.497764707149706 24.62861821198117 20.53797843346368 38 27.479236014607505 26.56341229572655 25.16810479483782 20.789246894828125 39 26.83067791315214 25.553867864568186 24.14741083066714 23.468043391612532 40 25.41506425793664 29.187215202145882 22.826595137295456 22.571125402622023 41 22.55970655721811 25.818601945512714 24.766721606394555 26.85496989087462 42 22.324812289263054 25.428853052386646 24.75277122450958 27.493563433840716 43 22.73562141141238 23.727283499768394 26.54536836548923 26.991726723329997 44 24.129205312994863 23.05130939684797 25.737108015814027 27.082377274343145 45 26.42870223744735 24.321817535468444 24.279427765030327 24.970052462053886 46 24.129582350343103 25.442587984358333 25.646295877365908 24.78153378793265 47 24.328711932693448 23.95027416001465 26.515151515151516 25.20586239214039 48 24.98443374376542 24.101519999138198 27.00799319178274 23.90605306531364 49 25.224875846987473 23.819065162826274 27.923763048185375 23.032295942000882 50 23.558424630234086 23.63081580109664 27.507783128117293 25.302976440551983 51 22.257591916319253 23.675521658102532 28.26358142390848 25.803305001669735 52 22.632259315515626 23.636471361320275 28.023624082991304 25.707645240172788 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 30.5 10 61.0 11 64.5 12 68.0 13 299.0 14 983.0 15 1436.0 16 3848.5 17 6261.0 18 7125.0 19 7989.0 20 7120.0 21 6251.0 22 7501.0 23 8751.0 24 8964.0 25 9177.0 26 9071.0 27 8965.0 28 9568.0 29 10171.0 30 11458.0 31 12745.0 32 15520.5 33 18296.0 34 19879.0 35 21462.0 36 24109.5 37 26757.0 38 29498.5 39 35938.5 40 39637.0 41 42685.0 42 45733.0 43 49189.0 44 52645.0 45 58239.0 46 63833.0 47 67572.0 48 71311.0 49 73008.5 50 74706.0 51 82319.5 52 89933.0 53 89118.0 54 88303.0 55 91645.0 56 94987.0 57 97849.0 58 100711.0 59 110357.5 60 120004.0 61 132059.5 62 144115.0 63 157982.0 64 160585.0 65 149321.0 66 140092.0 67 130863.0 68 108774.0 69 86685.0 70 76124.0 71 65563.0 72 48557.5 73 31552.0 74 29146.0 75 26740.0 76 20775.5 77 14811.0 78 12971.0 79 11131.0 80 9358.5 81 7586.0 82 4755.5 83 1925.0 84 1515.0 85 1105.0 86 672.5 87 240.0 88 166.0 89 55.0 90 18.0 91 12.0 92 6.0 93 7.5 94 9.0 95 7.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1856580.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.99407222517426 #Duplication Level Percentage of deduplicated Percentage of total 1 72.25191323421697 7.2209083926978845 2 9.575908289881406 1.9140463814143942 3 3.9137093551478865 1.1734168189106446 4 1.9901064835487803 0.7955707172949633 5 1.1526535726220488 0.5759851527694951 6 0.7326929854138582 0.439355196906279 7 0.4708946793887619 0.32943088053830943 8 0.3620117819495386 0.28943775161341795 9 0.2780238976779042 0.2500731822345689 >10 4.054841410031598 10.900195100456118 >50 2.7866252045650066 20.085508469783335 >100 2.283954621105462 40.41806900694488 >500 0.1096849776875565 7.444448009017308 >1k 0.03447242155894632 5.636720926748551 >5k 0.0012535426021435027 0.8106865760671633 >10k+ 0.0012535426021435027 1.7161474366026945 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 17057 0.9187322927102521 No Hit CGCACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 10340 0.5569380258324446 No Hit CGCACCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 6590 0.3549537321311228 No Hit CGCACCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6352 0.34213446229087896 No Hit CGCACCGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACCAATTGCTCT 4188 0.22557605920563617 No Hit CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 4005 0.2157192256730117 No Hit CGCACCGGGGGTCAGTGATGCTCGGAAGCTGGGCTGGCATGATTGCCAACTC 3341 0.1799545400682976 No Hit CGCACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3315 0.17855411563196844 No Hit CGCACCGGGGAACTCTCATTTCCAAAAGCTATACAGAGAGGCACGTTTGGGA 2973 0.16013314804640794 No Hit CGCACCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCGCACCGGGAAG 2556 0.13767249458682093 No Hit CGCACCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 2419 0.13029333505693264 No Hit CGCACCGGAGTATAAAAATTCGCCATTTTAAAAAGTGTAAAATTTGTGGTTA 2306 0.12420687500673282 No Hit CGCACCGGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGAC 2234 0.12032877656766744 No Hit CGCACCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2130 0.11472707882235077 No Hit CGCACCGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCCG 1978 0.1065399821176572 No Hit CGCACCGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACGT 1953 0.10519342015964839 No Hit CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC 1897 0.10217712137370866 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.3862478320352477E-5 0.0 0.0 0.0 0.0 8 3.7703734824246735E-4 0.0 0.0 0.0 0.0 9 7.002122181645822E-4 0.0 0.0 0.0 0.0 10 0.005170797918753837 0.0 0.0 0.0 0.0 11 0.00958752114102274 0.0 0.0 0.0 0.0 12 0.014435144189854464 0.0 0.0 0.0 0.0 13 0.020952504066617115 0.0 0.0 0.0 0.0 14 0.03560309816975299 0.0 0.0 0.0 0.0 15 0.04939189261976322 0.0 0.0 0.0 0.0 16 0.06705878550883883 0.0 0.0 0.0 0.0 17 0.07422249512544571 0.0 0.0 0.0 0.0 18 0.08343297891822599 0.0 0.0 0.0 0.0 19 0.09619838628014953 0.0 0.0 0.0 0.0 20 0.10546273255125015 0.0 0.0 0.0 0.0 21 0.11435004147410831 0.0 0.0 0.0 0.0 22 0.12544571200810092 0.0 0.0 0.0 0.0 23 0.13557185793232718 0.0 0.0 0.0 0.0 24 0.15173060142843292 0.0 0.0 0.0 0.0 25 0.16024087300304862 0.0 0.0 0.0 0.0 26 0.16837410722942184 0.0 0.0 0.0 0.0 27 0.18146268946126748 0.0 0.0 0.0 0.0 28 0.20957890314449149 0.0 0.0 0.0 0.0 29 0.21706578763102047 0.0 0.0 0.0 0.0 30 0.23203955660407846 0.0 0.0 0.0 0.0 31 0.23898781630740393 0.0 0.0 0.0 0.0 32 0.24652856327225328 0.0 0.0 0.0 0.0 33 0.2530459231490159 0.0 0.0 0.0 0.0 34 0.26591905546758016 0.0 0.0 0.0 0.0 35 0.32818408040590763 0.0 0.0 0.0 0.0 36 0.3437503366404895 0.0 0.0 0.0 0.0 37 0.35387648256471577 0.0 0.0 0.0 0.0 38 0.36400262848894205 0.0 0.0 0.0 0.0 39 0.37143565049715066 0.0 0.0 0.0 0.0 40 0.3811847590731345 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 30 1.8620267E-6 46.0 10 CGAAACG 30 1.8620267E-6 46.0 38 CGATTAC 20 6.312463E-4 46.0 30 CGTTAAT 45 3.110472E-10 46.0 35 CGCCTAC 20 6.312463E-4 46.0 45 ACGATTT 20 6.312463E-4 46.0 12 TTGCGTG 40 5.6152203E-9 46.0 40 GCGATAA 30 1.8620267E-6 46.0 8 TTACGCC 30 1.8620267E-6 46.0 37 ACCGGTA 1135 0.0 45.189426 4 CCGGGAT 24230 0.0 44.870407 5 CGCACCG 189430 0.0 44.71662 1 GCACCGG 188695 0.0 44.6068 2 ACCGGGT 8735 0.0 44.604465 4 CGGGATT 9000 0.0 44.594448 6 ACCGGGA 72215 0.0 44.582706 4 CACCGGG 175425 0.0 44.57614 3 CACCGGT 2485 0.0 44.51912 3 ACCGGGG 75060 0.0 44.431126 4 CGGGAGT 5785 0.0 44.40968 6 >>END_MODULE