##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527255_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1360826 Sequences flagged as poor quality 0 Sequence length 50 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5255396354861 34.0 31.0 34.0 31.0 34.0 2 32.73674885694424 34.0 31.0 34.0 31.0 34.0 3 32.950014917410456 34.0 31.0 34.0 31.0 34.0 4 36.404378664134875 37.0 37.0 37.0 35.0 37.0 5 36.48895597232857 37.0 37.0 37.0 35.0 37.0 6 36.2128104548267 37.0 37.0 37.0 35.0 37.0 7 36.611140586673095 37.0 37.0 37.0 35.0 37.0 8 36.67812490355123 37.0 37.0 37.0 35.0 37.0 9 38.649579740539934 39.0 39.0 39.0 38.0 39.0 10 38.11577894602249 39.0 39.0 39.0 37.0 39.0 11 37.14277064077259 39.0 35.0 39.0 35.0 39.0 12 36.886419718612075 39.0 35.0 39.0 33.0 39.0 13 36.79126501110355 39.0 35.0 39.0 33.0 39.0 14 37.51965497425828 40.0 36.0 40.0 33.0 40.0 15 37.60847970276876 40.0 36.0 40.0 33.0 40.0 16 37.57930918427485 40.0 36.0 40.0 33.0 40.0 17 37.676910934976256 40.0 36.0 40.0 33.0 40.0 18 37.659685367563526 40.0 36.0 40.0 33.0 40.0 19 37.643945662413856 40.0 36.0 40.0 34.0 40.0 20 37.36053323496171 40.0 35.0 40.0 33.0 40.0 21 37.487493625195285 40.0 35.0 40.0 33.0 40.0 22 37.35242565912174 40.0 35.0 40.0 33.0 40.0 23 37.426141181899816 40.0 35.0 40.0 33.0 40.0 24 37.419936127028734 40.0 35.0 40.0 33.0 40.0 25 37.36546553343337 40.0 35.0 40.0 33.0 40.0 26 37.25950121470342 39.0 35.0 40.0 33.0 40.0 27 37.16260418304765 39.0 35.0 40.0 33.0 40.0 28 37.03551592929588 39.0 35.0 40.0 33.0 40.0 29 37.259668760003116 40.0 35.0 40.0 33.0 40.0 30 37.27127421139808 40.0 35.0 40.0 33.0 40.0 31 37.24893924719252 40.0 35.0 40.0 33.0 40.0 32 36.55348295814454 40.0 35.0 40.0 31.0 40.0 33 36.76967812196416 39.0 35.0 40.0 32.0 40.0 34 36.76411018014059 39.0 35.0 40.0 32.0 40.0 35 36.778561697086914 39.0 35.0 40.0 32.0 40.0 36 36.56238784385366 39.0 35.0 40.0 31.0 40.0 37 36.45639045697246 39.0 35.0 40.0 31.0 40.0 38 36.21187793296131 39.0 35.0 40.0 31.0 40.0 39 36.17461894467037 39.0 35.0 40.0 31.0 40.0 40 36.09324998199623 39.0 35.0 40.0 30.0 40.0 41 35.934685257336355 38.0 35.0 40.0 30.0 40.0 42 35.86792212964773 38.0 35.0 40.0 30.0 40.0 43 35.82353585248959 38.0 35.0 40.0 30.0 40.0 44 35.64537126715686 38.0 35.0 40.0 30.0 40.0 45 35.547870190604826 37.0 35.0 40.0 29.0 40.0 46 35.31799656973044 37.0 35.0 40.0 29.0 40.0 47 35.22108116687953 37.0 34.0 40.0 29.0 40.0 48 35.086310079319475 36.0 34.0 40.0 28.0 40.0 49 34.837628028858944 36.0 34.0 40.0 27.0 40.0 50 34.443580590024 35.0 33.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 5.0 15 24.0 16 79.0 17 145.0 18 305.0 19 516.0 20 913.0 21 1429.0 22 2175.0 23 3312.0 24 4403.0 25 6295.0 26 8347.0 27 11023.0 28 14731.0 29 18722.0 30 24614.0 31 30449.0 32 37726.0 33 53097.0 34 108074.0 35 120858.0 36 112667.0 37 186260.0 38 388632.0 39 226022.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.32452789702725 0.5846449141918217 0.06981054153874192 0.02101664724218967 8 99.16080380592376 0.6188888219360889 0.08083325862380641 0.1394741135163496 9 93.11873817813593 3.5817951744014294 1.8932618865306807 1.4062047609319634 10 48.60834522562032 35.013072942462884 7.111122215477953 9.267459616438838 11 32.779062128442575 24.295317696751827 24.697793839917814 18.22782633488778 12 30.222453127732717 16.753574667150687 28.340360927848234 24.683611277268362 13 24.586758336480933 16.99460474741076 30.945028975048977 27.473607941059324 14 24.162898122169917 20.17098438742352 30.951716090080584 24.71440140032598 15 25.160454018368256 20.005202722464148 28.78134309603138 26.053000163136215 16 29.247310089607343 20.76768080562835 25.572777122130237 24.41223198263408 17 28.741734799305718 21.229385681931415 24.546121252827326 25.48275826593554 18 27.809653842592663 19.431874464479662 26.06916681486097 26.689304878066704 19 28.802286258493005 21.876786598727538 23.504107064385895 25.816820078393565 20 27.168866556047576 22.547335221402296 25.4636522229881 24.82014599956203 21 29.454316716464852 19.015950606469893 27.571122244871866 23.95861043219339 22 29.081087515964573 19.247868573939652 25.98877446492057 25.68226944517521 23 26.534472445411833 20.63643698753551 26.397643783995896 26.43144678305676 24 24.746293795092097 23.289531505129972 25.998694910297125 25.9654797894808 25 27.635715366990343 23.19466265341785 24.307369200764832 24.862252778826978 26 27.047175759428466 23.614040296114272 23.57384412114407 25.764939823313192 27 26.408666501080962 20.690301331691195 25.66779294340349 27.233239223824352 28 27.953022649479063 20.49365605889364 24.3308843305463 27.22243696108099 29 27.96015067319407 22.04859401569341 23.91584228990334 26.075413021209176 30 27.81171141644854 20.458603818563137 24.801333895736853 26.92835086925147 31 28.128724759814993 22.91703715243536 23.629619069594497 25.324619018155147 32 29.316532752901548 22.521542063423244 22.82988420268278 25.332040980992428 33 29.740907360676534 22.35539297456104 24.771425590046046 23.132274074716385 34 26.519408065395577 23.536219913493717 25.696231553482956 24.24814046762775 35 27.30789976088052 25.417871204694798 24.959252689175546 22.314976345249136 36 28.29450642477436 23.3001867983122 24.182959467264734 24.222347309648697 37 27.43907009419279 25.01069203557251 22.733398685798186 24.81683918443651 38 29.174339702504216 24.013136139374176 22.58319579431904 24.229328363802573 39 26.51499897856155 22.50669813774869 24.455955427071498 26.522347456618263 40 28.24321404793853 23.074588521971215 24.488435700082157 24.1937617300081 41 25.934248757739788 23.04431279237757 25.25715998959456 25.764278460288086 42 25.331453102747894 22.887496270647386 25.58438771745984 26.196662909144884 43 26.196222000461482 22.05065158954929 26.650064005243873 25.10306240474535 44 26.49368839219709 22.77881228018865 24.700880200701633 26.026619126912625 45 25.38531744690357 22.239727929948426 25.8178488653215 26.5571057578265 46 26.57165574437878 22.339079353275142 24.61813633778308 26.471128564562996 47 25.955632828884813 24.182739012923033 24.915382275176988 24.94624588301517 48 27.39203983462985 24.887017149878087 24.035916421349974 23.685026594142087 49 27.4459776635661 24.942204220083976 22.644188162189728 24.967629954160195 50 24.705877165780198 25.045376852000185 24.781713459325438 25.467032522894183 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.0 8 2.0 9 2.5 10 3.0 11 90.0 12 177.0 13 1284.5 14 2392.0 15 2519.5 16 2647.0 17 3345.5 18 4044.0 19 4374.0 20 4704.0 21 3796.0 22 2888.0 23 3489.0 24 4090.0 25 4042.0 26 3994.0 27 4056.5 28 4119.0 29 5749.5 30 7380.0 31 10434.0 32 13488.0 33 15164.5 34 16841.0 35 16550.0 36 16259.0 37 19672.0 38 23085.0 39 24449.5 40 25814.0 41 29587.0 42 33360.0 43 35127.5 44 36895.0 45 41117.5 46 45340.0 47 47559.5 48 49779.0 49 53650.5 50 57522.0 51 60362.0 52 63202.0 53 68324.5 54 73447.0 55 80041.0 56 86635.0 57 86589.5 58 86544.0 59 99990.5 60 113437.0 61 120275.5 62 127114.0 63 122914.0 64 118714.0 65 106703.0 66 94692.0 67 87933.5 68 81175.0 69 67044.5 70 52914.0 71 45013.0 72 37112.0 73 32408.5 74 27705.0 75 24160.0 76 20615.0 77 17612.0 78 14609.0 79 10000.0 80 5391.0 81 3409.5 82 1428.0 83 1207.0 84 986.0 85 583.5 86 181.0 87 115.5 88 50.0 89 41.0 90 32.0 91 20.0 92 8.0 93 8.0 94 8.0 95 6.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1360826.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.853388608320124 #Duplication Level Percentage of deduplicated Percentage of total 1 68.55922961143574 6.069815024370889 2 11.059416079024063 1.9582661665740808 3 4.5789830744765965 1.2161854976778526 4 2.3191868618215894 0.8213065017206781 5 1.3850078444884397 0.613100633641398 6 0.8188184178502278 0.43495905917267486 7 0.509491995909412 0.31575114428302703 8 0.3740200334808383 0.2649075762962212 9 0.28967301932812595 0.23081290285115927 >10 3.9344383340880396 9.456759768602744 >50 3.056048104594656 19.748292175345867 >100 2.9648863685501543 46.18321413897597 >500 0.11075724939986209 6.6125585125409 >1k 0.03919102671072043 5.289835608839155 >5k 0.0 0.0 >10k+ 8.519788415374007E-4 0.7842352891073819 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGCTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 10397 0.7640212635561049 No Hit CGCTTGGGGGTGTGTTAGAGTGCTCATTTTTCTTTTGCTCTAGCGTAGAT 3522 0.2588133971573147 No Hit CGCTTGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3030 0.22265888511830315 No Hit CGCTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2482 0.18238922536753413 No Hit CGCTTGGGGGAGCACGGCCCTGCTGAAGCAACACAGGTTTCCAACCTCTT 2349 0.17261574955211026 No Hit CGCTTGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 2331 0.1712930235019025 No Hit CGCTTGGGGACATAAAAGAATACATACTGGAGAGAAACCCTACAAATGTG 2232 0.16401803022575995 No Hit CGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2065 0.1517460718710548 No Hit CGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 1939 0.1424869895196006 No Hit CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1903 0.13984153741918512 No Hit CGCTTGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1903 0.13984153741918512 No Hit CGCTTGGGGAAGAGATGTGAAGAGAAACTCTCTACTCCTTATGTTGGCGC 1867 0.13719608531876962 No Hit CGCTTGGGGAATACTTGTGTTTTAAAAGTAATTTTTATTCTTTGGCGGTT 1771 0.13014154638432834 No Hit CGCTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1763 0.12955366813979158 No Hit CGCTTGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1588 0.11669383154054964 No Hit CGCTTGGGGGGGAAGGTGACAGCATTGCTTCTGTGTAAATTATGTACTGC 1584 0.11639989241828126 No Hit CGCTTGGGACAACAAATAGATGCTATATTGCTTGATTAGCTTGGTGCAGT 1468 0.10787565787249802 No Hit CGCTTGGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1452 0.10669990138342449 No Hit CGCTTGGGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGA 1451 0.10662641660285739 No Hit CGCTTGGGGGCGTAGCACAGTGCACGGTGCCCTCAAGTTTGCCTTCGACT 1409 0.10354005581903931 No Hit CGCTTGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 1396 0.10258475367166706 No Hit CGCTTGGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 1381 0.10148248196316062 No Hit CGCTTGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTT 1371 0.10074763415748964 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 2.93939122268387E-4 0.0 0.0 0.0 0.0 9 0.0016901499530432252 0.0 0.0 0.0 0.0 10 0.0090386280097529 0.0 0.0 0.0 0.0 11 0.017783316897237413 0.0 0.0 0.0 0.0 12 0.022265888511830315 0.0 0.0 0.0 0.0 13 0.028365125298899344 0.0 0.0 0.0 0.0 14 0.04144541623984257 0.0 0.0 0.0 0.0 15 0.05151283117753482 0.0 0.0 0.0 0.0 16 0.06091888309012321 0.0 0.0 0.0 0.0 17 0.06944311763590642 0.0 0.0 0.0 0.0 18 0.07605674788694514 0.0 0.0 0.0 0.0 19 0.08627113238577158 0.0 0.0 0.0 0.0 20 0.09369309522304835 0.0 0.0 0.0 0.0 21 0.10008627113238577 0.0 0.0 0.0 0.0 22 0.10765520353079673 0.0 0.0 0.0 0.0 23 0.11338701641503028 0.0 0.0 0.0 0.0 24 0.1219847357413806 0.0 0.0 0.0 0.0 25 0.12764306384504706 0.0 0.0 0.0 0.0 26 0.13418320931551866 0.0 0.0 0.0 0.0 27 0.14131123303052706 0.0 0.0 0.0 0.0 28 0.15057031538198123 0.0 0.0 0.0 0.0 29 0.1581392477803922 0.0 0.0 0.0 0.0 30 0.16585514973993737 0.0 0.0 0.0 0.0 31 0.17305665823551283 0.0 0.0 0.0 0.0 32 0.18033165151165542 0.0 0.0 0.0 0.0 33 0.18665134264042574 0.0 0.0 0.0 0.0 34 0.19539603152791024 0.0 0.0 0.0 0.0 35 0.21148919847210446 0.0 0.0 0.0 0.0 36 0.22096873516525992 0.0 0.0 0.0 0.0 37 0.22721494151346314 0.0 0.0 0.0 0.0 38 0.23529826737584378 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTCTA 55 1.8189894E-12 44.000004 43 ATTATCG 110 0.0 44.000004 11 ATAGTCG 55 1.8189894E-12 44.000004 22 TATCGCG 130 0.0 44.000004 13 AACGTCG 20 7.8569935E-4 44.0 19 AACCGGT 30 2.5280624E-6 44.0 16 GTACCGG 95 0.0 44.0 22 ACACGCG 20 7.8569935E-4 44.0 10 CGTATTA 20 7.8569935E-4 44.0 31 TAGACGA 30 2.5280624E-6 44.0 27 CACGCTA 80 0.0 44.0 28 ACCGATA 25 4.4432738E-5 44.0 44 TTCACGC 20 7.8569935E-4 44.0 12 ATAGCGG 20 7.8569935E-4 44.0 12 CGCGATA 25 4.4432738E-5 44.0 29 TAACGGG 20 7.8569935E-4 44.0 11 TAACGGC 35 1.4463512E-7 44.0 27 AATGCGT 25 4.4432738E-5 44.0 14 CTTATCG 25 4.4432738E-5 44.0 38 CGCTAAT 25 4.4432738E-5 44.0 12 >>END_MODULE