##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527254_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1469860 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.483718857578275 33.0 31.0 34.0 31.0 34.0 2 32.664179581728874 34.0 31.0 34.0 31.0 34.0 3 32.91291891744792 34.0 31.0 34.0 31.0 34.0 4 36.35765174914618 37.0 37.0 37.0 35.0 37.0 5 36.437225994312385 37.0 37.0 37.0 35.0 37.0 6 36.254910671764655 37.0 37.0 37.0 35.0 37.0 7 36.61248078048249 37.0 37.0 37.0 35.0 37.0 8 36.64706434626427 37.0 37.0 37.0 35.0 37.0 9 38.61578993917788 39.0 39.0 39.0 38.0 39.0 10 38.02514185024424 39.0 38.0 39.0 35.0 39.0 11 37.08063352972392 39.0 35.0 39.0 34.0 39.0 12 36.849201284476074 39.0 35.0 39.0 33.0 39.0 13 36.818411957601406 39.0 35.0 39.0 33.0 39.0 14 37.547984842093804 40.0 36.0 40.0 33.0 40.0 15 37.536531370334586 40.0 36.0 40.0 33.0 40.0 16 32.620682922183065 39.0 34.0 40.0 3.0 40.0 17 34.263493121793914 39.0 34.0 40.0 17.0 40.0 18 36.30336630699522 39.0 34.0 40.0 30.0 40.0 19 37.22896806498578 39.0 35.0 40.0 33.0 40.0 20 37.45727552283891 39.0 36.0 40.0 33.0 40.0 21 37.62811288149892 40.0 36.0 40.0 33.0 40.0 22 37.69403004367763 40.0 36.0 40.0 34.0 40.0 23 37.65779393955887 40.0 36.0 40.0 34.0 40.0 24 37.59928972827344 40.0 35.0 40.0 34.0 40.0 25 37.5310138380526 40.0 35.0 40.0 33.0 40.0 26 37.46161062958377 40.0 35.0 40.0 33.0 40.0 27 37.35564679629353 40.0 35.0 40.0 33.0 40.0 28 37.27134284897881 40.0 35.0 40.0 33.0 40.0 29 37.076341284203934 40.0 35.0 40.0 33.0 40.0 30 37.02911025539847 39.0 35.0 40.0 33.0 40.0 31 36.99276189569075 39.0 35.0 40.0 33.0 40.0 32 36.93665995400922 39.0 35.0 40.0 33.0 40.0 33 36.62336889227546 39.0 35.0 40.0 32.0 40.0 34 36.56103438422707 39.0 35.0 40.0 31.0 40.0 35 36.517104350074156 39.0 35.0 40.0 31.0 40.0 36 36.440844706298556 38.0 35.0 40.0 31.0 40.0 37 36.10887091287606 38.0 35.0 40.0 31.0 40.0 38 36.05184099165907 38.0 35.0 40.0 30.0 40.0 39 35.6946947328317 38.0 35.0 40.0 30.0 40.0 40 35.67648823697495 38.0 35.0 40.0 29.0 40.0 41 35.57494863456384 38.0 34.0 40.0 29.0 40.0 42 35.5806287673656 38.0 34.0 40.0 30.0 40.0 43 35.512929802838364 37.0 34.0 40.0 30.0 40.0 44 35.77280557331991 37.0 35.0 40.0 30.0 40.0 45 35.83934660443852 37.0 35.0 40.0 31.0 40.0 46 35.80770821710911 37.0 35.0 40.0 31.0 40.0 47 35.51996244540296 37.0 35.0 40.0 30.0 40.0 48 35.45399629896725 36.0 35.0 40.0 30.0 40.0 49 35.41362578748996 36.0 34.0 40.0 30.0 40.0 50 34.91473405630468 36.0 34.0 40.0 29.0 40.0 51 34.94515940293633 35.0 34.0 40.0 29.0 40.0 52 34.64992108091927 35.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 5.0 15 22.0 16 62.0 17 150.0 18 263.0 19 519.0 20 972.0 21 1512.0 22 2368.0 23 3445.0 24 4823.0 25 6812.0 26 8901.0 27 12034.0 28 15484.0 29 19976.0 30 26335.0 31 36025.0 32 50944.0 33 78733.0 34 119907.0 35 135250.0 36 157329.0 37 253831.0 38 346491.0 39 187667.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.3575578626536 0.5716870994516484 0.053610547943341545 0.017144489951423945 8 99.14563291742071 0.6333936565387179 0.08027975453444545 0.14069367150612982 9 93.19118827643449 3.5682309879852507 1.859700923897514 1.3808798116827452 10 48.73028723824038 34.91373328072061 7.011279985848992 9.344699495190017 11 32.844692691820995 24.401235491815548 24.635611554841958 18.118460261521506 12 30.408678377532556 16.670567264909582 28.226497761691586 24.694256595866275 13 24.583769882845985 17.018083354877337 30.85865320506715 27.539493557209532 14 24.25224171009484 20.184235233287524 30.85225803818051 24.711265018437132 15 25.166138271672132 20.288871048943435 28.55993087777067 25.985059801613758 16 27.747472548405973 28.562380090620877 22.569020178792538 21.121127182180615 17 28.755663804716097 21.2037200821847 24.49212850203421 25.548487611065003 18 27.942048902616573 19.43225885458479 26.027852992802035 26.597839249996596 19 28.797164355788986 21.78323105601894 23.49284965915121 25.92675492904086 20 27.06318969153525 22.471732001687236 25.54250064632006 24.92257766045746 21 29.57397303144517 18.96752071625869 27.579157198644772 23.87934905365137 22 28.90989618058863 19.232375872532078 26.137931503680623 25.71979644319867 23 26.71832691548855 20.512633856285632 26.319105220905392 26.449934007320426 24 24.80433510674486 23.297661001728056 25.889948702597525 26.008055188929557 25 27.57990556923789 23.197107207489147 24.283605241315502 24.939381981957464 26 26.993114990543315 23.593471487080404 23.57142857142857 25.84198495094771 27 26.485039391506675 20.565700134706706 25.638972419141957 27.31028805464466 28 27.999877539357488 20.478548977453634 24.23713823085192 27.28443525233696 29 28.152545140353503 21.95726123576395 23.87581130175663 26.01438232212592 30 27.913610820078105 20.29451784523696 24.8325010545222 26.959370280162737 31 28.262283482780674 22.688419305239954 23.663137985930632 25.386159226048736 32 29.374226116773027 22.140203828936087 22.850135387043665 25.63543466724722 33 29.984012082783394 22.170070618970513 24.70214850393915 23.14376879430694 34 26.669682826935897 23.483324942511533 25.639652756044796 24.207339474507776 35 27.455880151851197 25.35268665042929 24.81120650946349 22.380226688256023 36 28.248268542582288 23.170710135659178 24.25822867483978 24.322792646918753 37 27.578680962812786 24.913189011198345 22.74706434626427 24.7610656797246 38 29.033173227382196 23.98752262120202 22.498197107207492 24.48110704420829 39 26.82602424720722 22.470915597403835 24.279523219898493 26.423536935490453 40 28.37120542092444 22.94946457485747 24.44736233382771 24.23196767039038 41 25.85150966758739 23.030696801055882 25.21029213666608 25.90750139469065 42 25.34765215734832 22.77482209189991 25.48127032506497 26.3962554256868 43 26.14269386200046 22.00706189705142 26.555114092498606 25.295130148449513 44 26.424013171322443 22.681343801450478 24.69759024669016 26.19705278053692 45 25.44738954730382 22.140067761555525 25.80327378117644 26.60926890996421 46 26.271481637706994 22.289809913869348 24.841141333188194 26.597567115235464 47 26.13663886356524 24.154545330847835 24.92080878451009 24.788007021076837 48 27.53786074864273 24.757119725688163 23.97582082647327 23.72919869919584 49 27.505952947899797 24.794130053202345 22.673179758616467 25.02673724028139 50 24.696841876097043 25.017212523641707 24.668743962009987 25.617201638251263 51 24.754126243315692 25.948253575170426 24.064536758602863 25.233083422911022 52 26.224878559862848 24.321363939422803 24.212101832827614 25.241655667886736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 2.0 10 3.0 11 91.0 12 179.0 13 1266.5 14 2546.5 15 2739.0 16 3502.5 17 4266.0 18 4407.5 19 4549.0 20 3780.5 21 3012.0 22 3430.5 23 3849.0 24 3833.5 25 3818.0 26 3878.5 27 3939.0 28 5551.0 29 7163.0 30 8318.0 31 9473.0 32 11904.5 33 14336.0 34 16256.0 35 18176.0 36 18150.5 37 18125.0 38 22172.0 39 28345.0 40 30471.0 41 33304.5 42 36138.0 43 41234.5 44 46331.0 45 43484.0 46 40637.0 47 45711.5 48 50786.0 49 55612.0 50 60438.0 51 65190.5 52 69943.0 53 71521.0 54 73099.0 55 79635.5 56 86172.0 57 93052.0 58 99932.0 59 111911.5 60 123891.0 61 126836.0 62 129781.0 63 121969.5 64 109433.0 65 104708.0 66 95980.0 67 87252.0 68 74951.0 69 62650.0 70 52610.5 71 42571.0 72 38055.0 73 33539.0 74 28514.5 75 23490.0 76 21090.0 77 18690.0 78 13266.0 79 7842.0 80 5490.0 81 3138.0 82 2153.0 83 1168.0 84 882.5 85 597.0 86 384.0 87 171.0 88 103.5 89 24.5 90 13.0 91 12.5 92 12.0 93 8.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1469860.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.617385792324313 #Duplication Level Percentage of deduplicated Percentage of total 1 73.24010462339055 7.77618446256733 2 9.948354826803547 2.112510423902099 3 3.7139225621539222 1.1829644593561728 4 1.8444148154191375 0.7833145462553448 5 1.090283305111447 0.5787979236649335 6 0.6871715701194292 0.43775793992851314 7 0.40118987512625365 0.29817113761328956 8 0.3021828074582069 0.25667131572731516 9 0.21704169233171816 0.2073973842454329 >10 3.390848155364761 9.795757180352734 >50 2.6316310272974768 20.33388271337489 >100 2.4174955711036823 44.53358081012879 >500 0.08507738663591842 6.1311066472394335 >1k 0.029560786881971658 4.733824900847018 >5k 0.0 0.0 >10k+ 7.209948019993087E-4 0.8380781547967002 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGCTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 10948 0.7448328412229737 No Hit CGCTTGGGGGTGTGTTAGAGTGCTCATTTTTCTTTTGCTCTAGCGTAGATTT 3362 0.22872926673288613 No Hit CGCTTGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2780 0.1891336589879308 No Hit CGCTTGGGGACATAAAAGAATACATACTGGAGAGAAACCCTACAAATGTGAT 2510 0.17076456261140516 No Hit CGCTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2417 0.16443742941504635 No Hit CGCTTGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2172 0.14776917529560638 No Hit CGCTTGGGGGAGCACGGCCCTGCTGAAGCAACACAGGTTTCCAACCTCTTGA 2050 0.13946906508102813 No Hit CGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 1996 0.135795245805723 No Hit CGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1918 0.13048861796361558 No Hit CGCTTGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1896 0.12899187677738014 No Hit CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1888 0.12844760725511273 No Hit CGCTTGGGGAAGAGATGTGAAGAGAAACTCTCTACTCCTTATGTTGGCGCAC 1775 0.12075980025308532 No Hit CGCTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1729 0.11763025050004763 No Hit CGCTTGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1589 0.10810553386036766 No Hit CGCTTGGGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGAAC 1587 0.10796946647980081 No Hit CGCTTGGGACAACAAATAGATGCTATATTGCTTGATTAGCTTGGTGCAGTTC 1537 0.10456778196562938 No Hit CGCTTGGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1515 0.10307104077939394 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.360673805668567E-4 0.0 0.0 0.0 0.0 9 8.164042834011403E-4 0.0 0.0 0.0 0.0 10 0.008912413427129114 0.0 0.0 0.0 0.0 11 0.016736287809723374 0.0 0.0 0.0 0.0 12 0.02068224184616222 0.0 0.0 0.0 0.0 13 0.02490033064373478 0.0 0.0 0.0 0.0 14 0.039799708815805586 0.0 0.0 0.0 0.0 15 0.04830392010123413 0.0 0.0 0.0 0.0 16 0.05959751268828324 0.0 0.0 0.0 0.0 17 0.06687711754861007 0.0 0.0 0.0 0.0 18 0.0729321159838352 0.0 0.0 0.0 0.0 19 0.08272896738464888 0.0 0.0 0.0 0.0 20 0.089736437483842 0.0 0.0 0.0 0.0 21 0.09701604234416883 0.0 0.0 0.0 0.0 22 0.10504401779761338 0.0 0.0 0.0 0.0 23 0.11218755527737335 0.0 0.0 0.0 0.0 24 0.11933109275713333 0.0 0.0 0.0 0.0 25 0.12531805750207503 0.0 0.0 0.0 0.0 26 0.13252962867211843 0.0 0.0 0.0 0.0 27 0.13967316615187841 0.0 0.0 0.0 0.0 28 0.14974215231382582 0.0 0.0 0.0 0.0 29 0.15804226252840406 0.0 0.0 0.0 0.0 30 0.16641040643326574 0.0 0.0 0.0 0.0 31 0.1732137754616086 0.0 0.0 0.0 0.0 32 0.18096961615391943 0.0 0.0 0.0 0.0 33 0.1874328167308451 0.0 0.0 0.0 0.0 34 0.19491652266202222 0.0 0.0 0.0 0.0 35 0.20859129440899132 0.0 0.0 0.0 0.0 36 0.21729960676527016 0.0 0.0 0.0 0.0 37 0.22267426829766102 0.0 0.0 0.0 0.0 38 0.2300899405385547 0.0 0.0 0.0 0.0 39 0.23839005075313296 0.0 0.0 0.0 0.0 40 0.24607785775516036 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 25 3.417625E-5 46.0 45 ACCGATA 20 6.312032E-4 46.0 44 TTATCGG 20 6.312032E-4 46.0 14 CCCGTTA 20 6.312032E-4 46.0 37 ACTAACG 25 3.417625E-5 46.0 25 TCGTAAG 20 6.312032E-4 46.0 43 ATGCGCG 25 3.417625E-5 46.0 37 CGGTCTA 30 1.8617593E-6 46.0 20 TATCGCG 80 0.0 46.0 13 TTCGAAC 20 6.312032E-4 46.0 46 GCGTATA 25 3.417625E-5 46.0 35 GCGTACC 20 6.312032E-4 46.0 18 GTTATAT 20 6.312032E-4 46.0 32 AATCGCT 45 3.110472E-10 46.0 10 TACGTAC 20 6.312032E-4 46.0 43 GTCGATA 140 0.0 45.999996 21 ATTCGAT 35 1.0198346E-7 45.999996 21 ACGTATA 70 0.0 45.999996 20 ATAGTCG 35 1.0198346E-7 45.999996 22 CGACTTA 125 0.0 44.16 22 >>END_MODULE