##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527253_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1417437 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45669472435107 33.0 31.0 34.0 31.0 34.0 2 32.66525284721649 34.0 31.0 34.0 31.0 34.0 3 32.915643517136914 34.0 31.0 34.0 31.0 34.0 4 36.37109726922608 37.0 37.0 37.0 35.0 37.0 5 36.451797857682564 37.0 37.0 37.0 35.0 37.0 6 36.236709638594164 37.0 37.0 37.0 35.0 37.0 7 36.6176761295211 37.0 37.0 37.0 35.0 37.0 8 36.671896528734614 37.0 37.0 37.0 35.0 37.0 9 38.558429051873205 39.0 39.0 39.0 38.0 39.0 10 38.01495375103091 39.0 38.0 39.0 35.0 39.0 11 36.99702279536939 39.0 35.0 39.0 34.0 39.0 12 36.79937168283317 39.0 35.0 39.0 33.0 39.0 13 36.719471129933815 39.0 35.0 39.0 33.0 39.0 14 37.47620105867139 40.0 36.0 40.0 33.0 40.0 15 37.65394581910871 40.0 36.0 40.0 33.0 40.0 16 37.80613671013244 40.0 36.0 40.0 34.0 40.0 17 37.81650048644137 40.0 36.0 40.0 34.0 40.0 18 37.81446723910833 40.0 36.0 40.0 34.0 40.0 19 37.78565749306671 40.0 36.0 40.0 34.0 40.0 20 37.70223085752665 40.0 36.0 40.0 33.0 40.0 21 33.40507408794888 39.0 34.0 40.0 10.0 40.0 22 34.14029477147838 39.0 34.0 40.0 16.0 40.0 23 36.19885610436302 39.0 34.0 40.0 30.0 40.0 24 36.968975693452336 39.0 35.0 40.0 32.0 40.0 25 37.23983570345631 39.0 35.0 40.0 33.0 40.0 26 37.34597304853761 40.0 35.0 40.0 33.0 40.0 27 37.33277105084741 40.0 35.0 40.0 33.0 40.0 28 37.25360844961716 40.0 35.0 40.0 33.0 40.0 29 37.22561284910723 40.0 35.0 40.0 33.0 40.0 30 37.10391290759307 39.0 35.0 40.0 33.0 40.0 31 36.9677389541828 39.0 35.0 40.0 33.0 40.0 32 36.94663748723929 39.0 35.0 40.0 33.0 40.0 33 36.652845946592336 39.0 35.0 40.0 32.0 40.0 34 36.58508632129682 39.0 35.0 40.0 31.0 40.0 35 36.5279959532593 39.0 35.0 40.0 31.0 40.0 36 36.388259231274475 38.0 35.0 40.0 31.0 40.0 37 36.27135809210568 38.0 35.0 40.0 31.0 40.0 38 36.14513025975758 38.0 35.0 40.0 31.0 40.0 39 36.005795672047505 38.0 35.0 40.0 30.0 40.0 40 31.164077839085618 36.0 30.0 40.0 8.0 40.0 41 31.98385748361303 35.0 30.0 40.0 13.0 40.0 42 33.83004324001702 35.0 31.0 40.0 23.0 40.0 43 34.740253005953704 36.0 33.0 40.0 27.0 40.0 44 35.46258352223062 37.0 34.0 40.0 30.0 40.0 45 35.713754473743805 37.0 35.0 40.0 30.0 40.0 46 35.784895554440865 37.0 35.0 40.0 31.0 40.0 47 35.73703804825188 37.0 35.0 40.0 31.0 40.0 48 35.57071460671621 36.0 35.0 40.0 30.0 40.0 49 35.47620952465612 36.0 35.0 40.0 30.0 40.0 50 35.3745598569813 36.0 34.0 40.0 30.0 40.0 51 35.14913608153308 36.0 34.0 40.0 30.0 40.0 52 34.78902272199752 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 3.0 15 22.0 16 57.0 17 140.0 18 339.0 19 572.0 20 1017.0 21 1570.0 22 2348.0 23 3635.0 24 5052.0 25 7073.0 26 9279.0 27 12449.0 28 16064.0 29 21171.0 30 28196.0 31 41056.0 32 58699.0 33 67306.0 34 128749.0 35 153161.0 36 170128.0 37 170952.0 38 329801.0 39 188595.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.3430395848281 0.5848584452077941 0.056580997956170186 0.015520972007926985 8 99.15516527365943 0.6434148396013367 0.05947354273946567 0.1419463439997686 9 93.14417501448035 3.563967922383852 1.901389620843819 1.3904674422919678 10 48.695215378179064 34.95358171121538 7.003344769467708 9.347858141137841 11 32.969507639492974 24.342104799013995 24.596225440707418 18.092162120785616 12 30.389428242666167 16.735135318183453 28.22933223839931 24.646104200751072 13 24.720393216770834 17.04075736699409 30.71296995915868 27.525879457076396 14 24.19402061608382 20.214796142615157 30.913895996788572 24.677287244512456 15 25.196745957668664 20.114474223545738 28.645999786939385 26.042780031846213 16 28.96425026297465 20.796832592912416 25.6869264736281 24.551990670484823 17 28.7834309390823 21.163691931281605 24.41074982521269 25.642127304423408 18 27.894079243028084 19.45906590557464 25.982036591397005 26.664818260000267 19 28.86562154085155 21.742765286922804 23.58785610930151 25.803757062924138 20 27.053477509053316 22.445159820154263 25.55337556448717 24.947987106305252 21 34.07904548844146 18.565410667281864 25.80904830338138 21.54649554089529 22 28.916064699877314 19.273590290079913 26.073398676625487 25.736946333417286 23 26.64435879689891 20.572836746888925 26.30825920305453 26.47454525315764 24 24.966541722842003 23.20067840757649 25.893708150697346 25.939071718884154 25 27.640311350698475 23.161523228192856 24.26047859622685 24.937686824881812 26 27.02264721465575 23.590466454593752 23.61762815560762 25.769258175142877 27 26.4921121714757 20.537420710761747 25.591895795015933 27.37857132274662 28 27.98579407762038 20.493609239775736 24.22414541175375 27.29645127085013 29 28.009781034359904 21.99286458586872 23.873794743611178 26.1235596361602 30 27.937114665413702 20.265450951259208 24.862127911152314 26.935306472174776 31 28.292262724904177 22.719951574567336 23.628775035504223 25.359010665024268 32 29.34987586749887 22.142077566763106 22.87678394172016 25.631262624017857 33 29.976217637891487 22.277321672850363 24.596578190071234 23.149882499186912 34 26.6830201271732 23.449931108049245 25.64438490035183 24.22266386442572 35 27.411518113327084 25.447832954833267 24.809144956707073 22.33150397513258 36 28.347221075786788 23.195387167119243 24.15006804535228 24.307323711741684 37 27.381604967275443 24.994761671947323 22.80545802035646 24.818175340420773 38 29.029015046171363 24.01976243035846 22.444877620663213 24.50634490280697 39 26.60788451268028 22.415881622957492 24.294906934135344 26.681326930226884 40 28.649880029941365 27.450249993474134 22.305471072082923 21.594398904501574 41 25.839596398287895 23.125472243210808 25.064958795346815 25.96997256315448 42 25.407690077230942 22.843484401775882 25.449455601906823 26.299369919086352 43 26.205538588311157 22.025035327848784 26.49232382109399 25.27710226274607 44 26.32088763027916 22.75374496362096 24.783676452639515 26.141690953460365 45 25.468927366789494 22.13911447210705 25.794303379973854 26.597654781129602 46 26.28264959924145 22.337359614571938 24.80589966255996 26.57409112362666 47 25.933216079444797 24.122906344338407 24.94191981724761 25.001957758969183 48 27.451590441056638 24.800820071721 23.996622072092094 23.750967415130265 49 27.473319801867735 24.912853269669128 22.581179974841916 25.032646953621217 50 24.68187298624207 25.00336875642445 24.75326945747853 25.56148879985495 51 24.777115314472532 25.972865107937775 24.01983298023122 25.230186597358472 52 26.19044091553981 24.425424198747457 24.2042503476345 25.179884538078234 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.0 10 2.0 11 83.5 12 165.0 13 1186.0 14 2357.0 15 2507.0 16 3288.5 17 4070.0 18 4277.0 19 4484.0 20 3699.0 21 2914.0 22 3289.0 23 3664.0 24 3684.5 25 3705.0 26 3662.0 27 3619.0 28 5128.5 29 6638.0 30 7926.0 31 9214.0 32 11388.0 33 13562.0 34 15273.0 35 16984.0 36 16913.0 37 16842.0 38 20841.0 39 27010.5 40 29181.0 41 32010.0 42 34839.0 43 39793.5 44 44748.0 45 41717.0 46 38686.0 47 43498.0 48 48310.0 49 53137.0 50 57964.0 51 63032.0 52 68100.0 53 69161.5 54 70223.0 55 76800.0 56 83377.0 57 88771.0 58 94165.0 59 107246.5 60 120328.0 61 123137.5 62 125947.0 63 118372.5 64 106350.0 65 101902.0 66 93461.0 67 85020.0 68 73295.0 69 61570.0 70 51268.5 71 40967.0 72 36781.5 73 32596.0 74 27369.0 75 22142.0 76 20196.5 77 18251.0 78 13008.0 79 7765.0 80 5470.0 81 3175.0 82 2196.0 83 1217.0 84 878.5 85 540.0 86 339.5 87 139.0 88 92.0 89 30.0 90 15.0 91 10.5 92 6.0 93 4.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1417437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.482596488450799 #Duplication Level Percentage of deduplicated Percentage of total 1 71.99823045560007 7.547283977485446 2 9.17064960295284 1.9226443864945233 3 3.8669654234604667 1.2160751450678204 4 2.1436323844410428 0.8988333322268436 5 1.2645167371508594 0.662770935422243 6 0.8646351635326007 0.5438172917422753 7 0.5512970075667494 0.40453168529288475 8 0.4197840088537508 0.35203411016945013 9 0.3397248813049958 0.3205078963026402 >10 4.169393851433705 11.53750948721182 >50 2.759965129424563 21.068789360112515 >100 2.338723186804512 42.35282476537041 >500 0.08455035407427546 6.041845698825234 >1k 0.027176899523874254 4.28505812447691 >5k 0.0 0.0 >10k+ 7.549138756631738E-4 0.8454738037989863 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGCTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 10684 0.7537548406031449 No Hit CGCTTGGGGGTGTGTTAGAGTGCTCATTTTTCTTTTGCTCTAGCGTAGATTT 3247 0.22907543686244963 No Hit CGCTTGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2848 0.20092603762989114 No Hit CGCTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2251 0.15880776359019835 No Hit CGCTTGGGGACATAAAAGAATACATACTGGAGAGAAACCCTACAAATGTGAT 2181 0.15386927249676705 No Hit CGCTTGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2104 0.1484369322939926 No Hit CGCTTGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1958 0.13813665087055016 No Hit CGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1938 0.1367256534152841 No Hit CGCTTGGGGGAGCACGGCCCTGCTGAAGCAACACAGGTTTCCAACCTCTTGA 1856 0.1309405638486931 No Hit CGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 1814 0.1279774691926343 No Hit CGCTTGGGGAAGAGATGTGAAGAGAAACTCTCTACTCCTTATGTTGGCGCAC 1798 0.12684867122842144 No Hit CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1794 0.12656647173736824 No Hit CGCTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1741 0.12282732848091309 No Hit CGCTTGGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1470 0.10370831296205758 No Hit CGCTTGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1451 0.10236786537955479 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.4109974552660895E-4 0.0 0.0 0.0 0.0 9 6.349488548697402E-4 0.0 0.0 0.0 0.0 10 0.00931258320475619 0.0 0.0 0.0 0.0 11 0.016508670226613245 0.0 0.0 0.0 0.0 12 0.020600562846884905 0.0 0.0 0.0 0.0 13 0.025468504067552914 0.0 0.0 0.0 0.0 14 0.038096931292184416 0.0 0.0 0.0 0.0 15 0.04656291602378095 0.0 0.0 0.0 0.0 16 0.05693374731998671 0.0 0.0 0.0 0.0 17 0.06271883688657767 0.0 0.0 0.0 0.0 18 0.0677984277255356 0.0 0.0 0.0 0.0 19 0.07527671423844587 0.0 0.0 0.0 0.0 20 0.08070905444122031 0.0 0.0 0.0 0.0 21 0.08642359413504798 0.0 0.0 0.0 0.0 22 0.09488957886664451 0.0 0.0 0.0 0.0 23 0.10180346639744835 0.0 0.0 0.0 0.0 24 0.11005780151075498 0.0 0.0 0.0 0.0 25 0.11683058929603221 0.0 0.0 0.0 0.0 26 0.12402667631788926 0.0 0.0 0.0 0.0 27 0.1307289142304032 0.0 0.0 0.0 0.0 28 0.14067644629002912 0.0 0.0 0.0 0.0 29 0.14900133127609905 0.0 0.0 0.0 0.0 30 0.1561974182979561 0.0 0.0 0.0 0.0 31 0.16219415748283697 0.0 0.0 0.0 0.0 32 0.170307392850617 0.0 0.0 0.0 0.0 33 0.17715073050865754 0.0 0.0 0.0 0.0 34 0.18575781498578067 0.0 0.0 0.0 0.0 35 0.19888009131975531 0.0 0.0 0.0 0.0 36 0.20657002745095548 0.0 0.0 0.0 0.0 37 0.2129900658724162 0.0 0.0 0.0 0.0 38 0.22216154933164578 0.0 0.0 0.0 0.0 39 0.23090973355429553 0.0 0.0 0.0 0.0 40 0.23944626815865538 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAACGT 55 1.8189894E-12 46.000004 14 GTCGATA 160 0.0 46.000004 21 CGTTGAC 20 6.3119543E-4 46.000004 19 ATCGTTC 40 5.6134013E-9 46.000004 24 CCCGTTA 35 1.0197982E-7 46.000004 37 TCAATCG 20 6.3119543E-4 46.000004 12 CTTATCG 20 6.3119543E-4 46.000004 38 TATTCGA 70 0.0 46.000004 18 CGAATAC 35 1.0197982E-7 46.000004 18 TTACGAT 20 6.3119543E-4 46.000004 41 CAGTACG 40 5.6134013E-9 46.000004 33 CGTTTAG 20 6.3119543E-4 46.000004 42 CGATAGA 20 6.3119543E-4 46.000004 31 CGATTGT 30 1.861712E-6 46.0 12 TCGATAG 30 1.861712E-6 46.0 22 ATCGTCA 30 1.861712E-6 46.0 22 CATAACG 25 3.4175624E-5 46.0 45 CGCGTAC 25 3.4175624E-5 46.0 24 TTCGATA 30 1.861712E-6 46.0 20 TCGCGTA 25 3.4175624E-5 46.0 23 >>END_MODULE