##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527250_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1516940 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53441533613722 34.0 31.0 34.0 31.0 34.0 2 32.63796920115496 34.0 31.0 34.0 31.0 34.0 3 32.925923899429115 34.0 31.0 34.0 31.0 34.0 4 36.31676994475721 37.0 37.0 37.0 35.0 37.0 5 36.43414505517687 37.0 37.0 37.0 35.0 37.0 6 36.313891122918506 37.0 37.0 37.0 35.0 37.0 7 36.50798449510198 37.0 37.0 37.0 35.0 37.0 8 36.648021015992725 37.0 37.0 37.0 35.0 37.0 9 38.675016150935434 39.0 39.0 39.0 39.0 39.0 10 38.15559415665748 39.0 39.0 39.0 37.0 39.0 11 37.80143710364286 39.0 38.0 39.0 35.0 39.0 12 37.43834429839018 39.0 37.0 39.0 35.0 39.0 13 37.255194008991786 39.0 37.0 39.0 34.0 39.0 14 38.118962516645354 40.0 38.0 40.0 34.0 40.0 15 38.22809933154904 40.0 38.0 40.0 34.0 40.0 16 38.31175590333171 40.0 38.0 40.0 35.0 40.0 17 38.288242778224586 40.0 38.0 40.0 35.0 40.0 18 38.28519519559112 40.0 38.0 40.0 35.0 40.0 19 38.228777670837346 40.0 38.0 40.0 34.0 40.0 20 38.194999143011586 40.0 38.0 40.0 34.0 40.0 21 33.9105007449207 40.0 34.0 40.0 10.0 40.0 22 34.71604743760465 40.0 34.0 40.0 17.0 40.0 23 36.73178504093768 40.0 34.0 40.0 30.0 40.0 24 37.46878518596648 40.0 37.0 40.0 33.0 40.0 25 37.70354199902435 40.0 37.0 40.0 33.0 40.0 26 37.787394359697814 40.0 37.0 40.0 34.0 40.0 27 37.77846322201274 40.0 37.0 40.0 34.0 40.0 28 37.683535274961436 40.0 37.0 40.0 33.0 40.0 29 37.64514746792886 40.0 37.0 40.0 33.0 40.0 30 37.51648384247235 40.0 37.0 40.0 33.0 40.0 31 37.36182644007014 40.0 36.0 40.0 33.0 40.0 32 37.31432357245507 40.0 36.0 40.0 33.0 40.0 33 37.045948422482105 40.0 36.0 40.0 32.0 40.0 34 36.91572046356481 39.0 35.0 40.0 31.0 40.0 35 36.86786491225757 39.0 35.0 40.0 31.0 40.0 36 36.71806267881393 39.0 35.0 40.0 31.0 40.0 37 36.61327145437526 39.0 35.0 40.0 31.0 40.0 38 36.5560780254987 39.0 35.0 40.0 31.0 40.0 39 36.37433583398157 39.0 35.0 40.0 31.0 40.0 40 31.47982978891716 37.0 30.0 40.0 9.0 40.0 41 32.3852578216673 37.0 30.0 40.0 14.0 40.0 42 34.18972141284428 37.0 31.0 40.0 24.0 40.0 43 35.018570279641914 37.0 33.0 40.0 27.0 40.0 44 35.72963663691379 38.0 34.0 40.0 30.0 40.0 45 35.96209869869606 38.0 35.0 40.0 30.0 40.0 46 35.99731960393951 38.0 35.0 40.0 30.0 40.0 47 35.97259087373265 38.0 35.0 40.0 31.0 40.0 48 35.79490355584268 38.0 35.0 40.0 30.0 40.0 49 35.61919719962556 37.0 35.0 40.0 30.0 40.0 50 35.51333473967329 37.0 35.0 40.0 30.0 40.0 51 35.35619075243582 37.0 34.0 40.0 29.0 40.0 52 34.95106859862618 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 1.0 14 2.0 15 12.0 16 44.0 17 93.0 18 209.0 19 377.0 20 732.0 21 1258.0 22 2203.0 23 3115.0 24 4812.0 25 6702.0 26 9229.0 27 12148.0 28 16264.0 29 20847.0 30 27583.0 31 36813.0 32 49752.0 33 62623.0 34 102998.0 35 142804.0 36 194977.0 37 200175.0 38 384529.0 39 236636.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.558519124026 0.3961923345682756 0.031972259944361675 0.013316281461363006 8 99.51632892533652 0.39896106635727185 0.044431552994844886 0.04027845531135048 9 98.84042875789419 0.500547154139254 0.23402375835563702 0.4250003296109273 10 54.641646999881345 28.323928434875473 5.876962833071842 11.157461732171345 11 33.46460637863066 24.674080715123868 21.535855076667502 20.325457829577967 12 29.340053001437106 16.08824343744644 28.694477039302807 25.87722652181365 13 22.941447914881273 17.061123050351366 30.863976162537742 29.133452872229622 14 23.56830197634712 19.74138726647066 32.0377206745158 24.65259008266642 15 25.0935435811568 20.3552546574024 28.183909712974803 26.36729204846599 16 27.84764064498266 22.24530963650507 24.763932653895342 25.143117064616927 17 29.78054504462932 19.437881524648304 22.631086265771884 28.150487164950494 18 27.48948541142036 20.04944163908922 24.756285680382874 27.704787269107545 19 28.57093886376521 19.308344430234552 24.153888749719833 27.966827956280405 20 29.437156380608332 20.35485912428969 24.502880799504265 25.705103695597714 21 36.41963426371511 18.230187087162314 23.80529223304811 21.544886416074466 22 31.114612311627354 18.72763589858531 24.781929410523816 25.375822379263518 23 29.8231307764315 22.492320065394807 23.083773913272772 24.60077524490092 24 28.936015926800007 21.869355412870647 23.337508405078644 25.857120255250702 25 27.20364681529922 22.325668780571416 23.247524621936265 27.2231597821931 26 27.249264967632207 21.95281289965325 22.20213060503382 28.595791527680724 27 27.512953709441373 19.429773095837675 23.525716244544938 29.531556950176014 28 27.983572191385285 21.779503474099172 22.23561907524358 28.00130525927196 29 30.006526296359777 20.657639722072066 22.823513125107123 26.512320856461034 30 28.20249976927235 21.009334581460045 23.63429008398486 27.153875565282743 31 29.108600208314105 21.94879164634066 22.744406502564374 26.19820164278086 32 30.9606180864108 20.869184015188473 23.048373699684895 25.121824198715835 33 32.77473070787243 19.577504713436262 22.77459886350152 24.873165715189792 34 27.904201880100725 22.07476894273999 24.73736601315807 25.28366316400121 35 28.783735678405208 23.55452423958759 25.708070193943072 21.953669888064127 36 28.389455087215048 23.00341476920643 23.01778580563503 25.589344337943494 37 28.68887365353936 23.290571809036614 22.677956939628462 25.342597597795564 38 29.95022874998352 23.527232454810342 22.487903278969505 24.034635516236634 39 29.155009426872518 23.170329742771635 22.572547365090248 25.102113465265603 40 28.44212691339143 27.937888116866848 20.82073120888104 22.79925376086068 41 27.691009532348016 22.01899877384735 24.01294711722283 26.277044576581805 42 25.342795364351918 21.716547786992237 24.122641633815444 28.818015214840404 43 27.371748388202565 20.560338576344485 25.009558716890584 27.058354318562365 44 26.291745223937664 22.54004772766227 24.745935897266865 26.422271151133202 45 26.525241604809686 21.118501720569043 25.58301580814007 26.773240866481206 46 28.055361451342836 22.21083233351352 24.72484079792213 25.008965417221514 47 27.32988780044036 22.449998022334437 23.575883027674134 26.644231149551068 48 27.947776444684695 22.46707186836658 25.132437670573655 24.452714016375072 49 27.142932482497663 21.724062916133796 24.518702124012815 26.61430247735573 50 24.901973710232443 22.76082112674199 25.766740938995607 26.570464224029955 51 25.864042084723195 22.769720621778053 24.349677640513136 27.016559652985617 52 26.787018603240735 23.068084433135127 23.56507178925996 26.57982517436418 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 3.0 8 4.0 9 63.5 10 123.0 11 514.0 12 905.0 13 1464.0 14 2693.5 15 3364.0 16 2882.0 17 2400.0 18 3263.5 19 4127.0 20 3790.5 21 3454.0 22 3991.5 23 4529.0 24 4444.0 25 4359.0 26 5530.5 27 6702.0 28 7024.5 29 7347.0 30 10379.0 31 13411.0 32 14131.0 33 14851.0 34 15694.0 35 16537.0 36 20058.5 37 23580.0 38 24909.5 39 26869.5 40 27500.0 41 30962.0 42 34424.0 43 38682.0 44 42940.0 45 47816.5 46 52693.0 47 53381.0 48 54069.0 49 56077.5 50 58086.0 51 59515.0 52 60944.0 53 67683.5 54 74423.0 55 83167.5 56 91912.0 57 104836.5 58 117761.0 59 133084.0 60 148407.0 61 137484.0 62 126561.0 63 124527.0 64 110767.0 65 99041.0 66 93910.5 67 88780.0 68 73013.0 69 57246.0 70 49458.5 71 41671.0 72 37961.0 73 34251.0 74 32030.5 75 29810.0 76 21115.5 77 12421.0 78 8699.0 79 4977.0 80 3365.5 81 1754.0 82 1239.5 83 725.0 84 397.0 85 69.0 86 42.0 87 15.0 88 10.0 89 4.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1516940.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.123529354249479 #Duplication Level Percentage of deduplicated Percentage of total 1 73.87132166266677 7.478384932892126 2 8.929490370821263 1.8079591577499423 3 3.6569981766300352 1.1106518516865294 4 1.9376189425317645 0.7846216896828061 5 1.1261155076032456 0.5700131698748505 6 0.6858494039689097 0.41659299442042597 7 0.46230890709854505 0.32761384542201805 8 0.3361974403218043 0.2722803724737059 9 0.26460972061066823 0.24109058466196676 >10 3.480022113554663 9.468206312063925 >50 2.6362867310206295 19.481718595483287 >100 2.478273503150578 44.1405736153429 >500 0.09540421305361621 6.3626140429179285 >1k 0.03652192530958746 5.821599815628558 >5k 0.0029813816579255066 1.7160790196990436 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6578 0.4336361359051776 No Hit GACACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 5563 0.36672511767110105 No Hit GACACTGGGATCCAAATCAAATGTAAGAAGTCCCTCACATCCGATTAGCCCA 5374 0.3542658246206178 No Hit GACACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5228 0.3446411855445832 No Hit GACACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4030 0.2656664073727372 No Hit GACACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3148 0.2075230398038156 No Hit GACACTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2566 0.16915632787058157 No Hit GACACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2359 0.1555104354819571 No Hit GACACTGGGGACTTAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCGCCTGG 2163 0.14258968713330786 No Hit GACACTGGGGCTGACACTGGGGAATCTCTCTTCATCTCTAACCATGCCTACT 2091 0.1378432897807428 No Hit GACACTGGGGCCTTTCGCTGCTGCGGCCGCAGCCATGAGTATGCTCAGGCTA 2021 0.13322873679908237 No Hit GACACTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1973 0.13006447189737233 No Hit GACACTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1940 0.1278890397774467 No Hit GACACTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1909 0.12584545202842565 No Hit GACACTGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 1878 0.1238018642794046 No Hit GACACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1831 0.12070352156314686 No Hit GACACTGGGGGTCCGTGGTCGTTCCGCGCCGTCATGTCTGTCCTGACGCCAC 1796 0.11839624507231665 No Hit GACACTGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 1757 0.11582527983967725 No Hit GACACTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1754 0.11562751328332037 No Hit GACACTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1752 0.11549566891241579 No Hit GACACTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1701 0.11213363745434887 No Hit GACACTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1602 0.10560734109457198 No Hit GACACTGGGACAGTGCTGGGACCATGGTTTGTTGGTGAGATAATTGATGGCA 1580 0.10415705301462155 No Hit GACACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1580 0.10415705301462155 No Hit GACACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGACACTGGGAAG 1547 0.1019816208946959 No Hit GACACTGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTT 1528 0.10072909937110235 No Hit GACACTGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGT 1525 0.10053133281474548 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.3184437090458422E-4 0.0 0.0 0.0 0.0 8 2.6368874180916844E-4 0.0 0.0 0.0 0.0 9 3.296109272614606E-4 0.0 0.0 0.0 0.0 10 0.0039553311271375265 0.0 0.0 0.0 0.0 11 0.007383284770656717 0.0 0.0 0.0 0.0 12 0.011602304639603413 0.0 0.0 0.0 0.0 13 0.01463472517040885 0.0 0.0 0.0 0.0 14 0.023204609279206825 0.0 0.0 0.0 0.0 15 0.03454322517700107 0.0 0.0 0.0 0.0 16 0.0442997086239403 0.0 0.0 0.0 0.0 17 0.048386884121982415 0.0 0.0 0.0 0.0 18 0.05306735928909515 0.0 0.0 0.0 0.0 19 0.05992326657613353 0.0 0.0 0.0 0.0 20 0.06710878479043338 0.0 0.0 0.0 0.0 21 0.0717892599575461 0.0 0.0 0.0 0.0 22 0.08068875499360555 0.0 0.0 0.0 0.0 23 0.08761058446609622 0.0 0.0 0.0 0.0 24 0.09835590069481984 0.0 0.0 0.0 0.0 25 0.10409113082916925 0.0 0.0 0.0 0.0 26 0.11094703811620762 0.0 0.0 0.0 0.0 27 0.11885770037048268 0.0 0.0 0.0 0.0 28 0.13659076825714925 0.0 0.0 0.0 0.0 29 0.14272153150421243 0.0 0.0 0.0 0.0 30 0.15089588250029665 0.0 0.0 0.0 0.0 31 0.1595316887945469 0.0 0.0 0.0 0.0 32 0.17001331628146135 0.0 0.0 0.0 0.0 33 0.1755507798594539 0.0 0.0 0.0 0.0 34 0.18187930966287394 0.0 0.0 0.0 0.0 35 0.20126043218584783 0.0 0.0 0.0 0.0 36 0.21200574841457143 0.0 0.0 0.0 0.0 37 0.21866388914525295 0.0 0.0 0.0 0.0 38 0.22551979643229134 0.0 0.0 0.0 0.0 39 0.23270531464659117 0.0 0.0 0.0 0.0 40 0.24226403153717352 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCACG 20 6.312096E-4 46.0 19 CGCGATA 20 6.312096E-4 46.0 10 CGATTAT 20 6.312096E-4 46.0 27 TCGATTA 20 6.312096E-4 46.0 45 CACGAAC 20 6.312096E-4 46.0 29 ATATCGC 20 6.312096E-4 46.0 13 CTAGTCG 40 5.6134013E-9 46.0 40 CGCTAAT 25 3.417677E-5 46.0 19 CGTAAAT 20 6.312096E-4 46.0 20 CCGCGTA 20 6.312096E-4 46.0 32 ACGTACT 20 6.312096E-4 46.0 24 CACGTCA 40 5.6134013E-9 46.0 27 AGGATAC 25 3.417677E-5 46.0 46 TGTACGC 20 6.312096E-4 46.0 31 TCGACGG 20 6.312096E-4 46.0 21 TAATCGT 20 6.312096E-4 46.0 21 CCGGATA 30 1.8618011E-6 45.999996 31 CATCGAA 30 1.8618011E-6 45.999996 44 ATACGGT 30 1.8618011E-6 45.999996 31 ATCGAAC 30 1.8618011E-6 45.999996 45 >>END_MODULE