##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527249_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2148323 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38605647288606 33.0 31.0 34.0 31.0 34.0 2 32.76738367554599 34.0 31.0 34.0 31.0 34.0 3 33.17718750858228 34.0 34.0 34.0 31.0 34.0 4 35.38908022676292 35.0 35.0 37.0 33.0 37.0 5 36.01076793387214 37.0 35.0 37.0 35.0 37.0 6 36.23288350960261 37.0 37.0 37.0 35.0 37.0 7 36.61770646220331 37.0 37.0 37.0 35.0 37.0 8 36.69227485811026 37.0 37.0 37.0 35.0 37.0 9 38.65223804800302 39.0 39.0 39.0 38.0 39.0 10 38.07500734293679 39.0 38.0 39.0 37.0 39.0 11 37.25743940738893 39.0 35.0 39.0 35.0 39.0 12 37.10770214720971 39.0 37.0 39.0 34.0 39.0 13 36.96069631987369 39.0 35.0 39.0 33.0 39.0 14 37.71374648970383 40.0 37.0 40.0 33.0 40.0 15 37.74501087592508 40.0 36.0 40.0 33.0 40.0 16 37.662618237574144 40.0 36.0 40.0 33.0 40.0 17 37.67525320913103 40.0 36.0 40.0 33.0 40.0 18 37.62199352704412 40.0 36.0 40.0 33.0 40.0 19 37.608790205197266 40.0 36.0 40.0 33.0 40.0 20 37.337039169622074 40.0 36.0 40.0 33.0 40.0 21 37.582296982343905 40.0 36.0 40.0 33.0 40.0 22 37.45660219622469 40.0 36.0 40.0 33.0 40.0 23 37.608135741226995 40.0 36.0 40.0 34.0 40.0 24 37.647327706308594 40.0 36.0 40.0 34.0 40.0 25 37.62081865715724 40.0 36.0 40.0 34.0 40.0 26 37.52774326765575 40.0 36.0 40.0 34.0 40.0 27 37.41616833222937 40.0 35.0 40.0 33.0 40.0 28 37.307642752044266 40.0 35.0 40.0 33.0 40.0 29 37.53662740658644 40.0 35.0 40.0 34.0 40.0 30 37.60227908000799 40.0 35.0 40.0 34.0 40.0 31 37.56082907458515 40.0 35.0 40.0 34.0 40.0 32 36.83895159154373 40.0 35.0 40.0 32.0 40.0 33 37.056661870677736 40.0 35.0 40.0 33.0 40.0 34 37.02357652922768 40.0 35.0 40.0 32.0 40.0 35 37.06832399038692 40.0 35.0 40.0 33.0 40.0 36 36.981614496516585 40.0 35.0 40.0 33.0 40.0 37 36.97449312789557 40.0 35.0 40.0 33.0 40.0 38 36.81139661028626 40.0 35.0 40.0 32.0 40.0 39 36.784363431383454 40.0 35.0 40.0 32.0 40.0 40 36.74785076545752 39.0 35.0 40.0 32.0 40.0 41 36.62468213578684 39.0 35.0 40.0 32.0 40.0 42 36.55677195654471 39.0 35.0 40.0 32.0 40.0 43 36.4944154114628 39.0 35.0 40.0 31.0 40.0 44 36.389703503616545 39.0 35.0 40.0 31.0 40.0 45 36.30250479094624 39.0 35.0 40.0 31.0 40.0 46 36.03464562824119 39.0 35.0 40.0 30.0 40.0 47 36.0015854226762 38.0 35.0 40.0 30.0 40.0 48 35.924287921322815 38.0 35.0 40.0 30.0 40.0 49 35.68462703234104 38.0 35.0 40.0 29.0 40.0 50 35.27568899090127 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 8.0 15 26.0 16 62.0 17 169.0 18 388.0 19 603.0 20 1054.0 21 1666.0 22 2486.0 23 3726.0 24 5293.0 25 7477.0 26 10328.0 27 14069.0 28 19357.0 29 25579.0 30 34123.0 31 43977.0 32 55872.0 33 81172.0 34 174987.0 35 162855.0 36 149886.0 37 260342.0 38 678614.0 39 414201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 98.83299671418125 1.0264285212232984 0.0992867459874516 0.041288018608002616 8 98.76112670208343 1.0584069527719995 0.1026847452640967 0.0777815998804649 9 93.2575781202361 3.427976146976037 1.8767662032199066 1.4376795295679468 10 40.70761240279045 43.62789021948748 5.9747998787891765 9.689697498932889 11 31.96753933184163 19.9589633402426 29.365975228119794 18.70752209979598 12 31.569694128862373 16.331250002909243 28.98358393965898 23.115471928569402 13 24.80427756906201 16.14989924699405 32.171791671922705 26.874031512021233 14 24.30919372924835 19.378603682965736 33.2968552680393 23.015347319746613 15 26.11702244029413 21.10185479557776 31.22114318936212 21.559979574765993 16 31.33662861683276 22.20732171093453 27.213691795879857 19.24235787635286 17 29.680778914530077 22.238974306936154 25.54504141137064 22.53520536716313 18 27.769799978867237 22.046498594485094 27.166492189489194 23.017209237158472 19 26.63156331706173 23.86940883656694 26.77893408021047 22.72009376616086 20 27.375445871035218 24.053971400017595 27.41505816397255 21.155524564974634 21 27.044164215529975 23.391221897265915 28.362355195191785 21.202258692012325 22 25.40204615413976 22.534786435745463 29.834899128296815 22.228268281817957 23 25.824980694243838 22.507276605985226 30.93696804437694 20.730774655394 24 26.704224644059575 23.636715708019697 27.146243837635215 22.51281581028551 25 25.506825556492203 25.199795375276434 25.2922861227106 24.001092945520764 26 25.315513542423556 24.408899406653468 25.736167233698097 24.53941981722488 27 22.930024954348113 21.862913537675666 28.93242775876812 26.274633749208103 28 23.740471055795613 24.684882115026465 26.46217538051773 25.11247144866019 29 26.782657915034193 24.812283813933007 25.378585994750324 23.02647227628248 30 26.59139244890084 22.55638467772304 27.71343042922317 23.13879244415295 31 26.562765468693488 23.36580672459402 26.485914827518954 23.58551297919354 32 29.114290541971577 23.383448392071397 26.680904128476023 20.821356937481003 33 29.957459841932522 22.515375946726817 26.766459233551004 20.76070497778965 34 24.663470064790072 24.43952794807857 30.066987133685203 20.83001485344615 35 23.098575028056768 27.891895213149976 29.31323641742885 19.696293341364406 36 24.109689278567515 29.878700735410828 25.644514349099275 20.36709563692238 37 25.65419631964095 28.37119930289812 24.892299714707704 21.082304662753227 38 25.973189320227917 27.44079917219152 25.822187818126046 20.76382368945452 39 25.74463895792206 26.66698629582237 24.525083053153555 23.063291693102013 40 24.1552131592875 25.437469132900407 26.103756278734625 24.303561429077472 41 22.296135171480266 27.78129731888547 25.424342615146788 24.498224894487468 42 22.226685652017878 25.810224998754844 26.831300507419044 25.131788841808238 43 22.21104554575825 24.992191583854012 26.900796574816727 25.89596629557101 44 23.37325439424146 24.370311168292663 25.97062918378661 26.285805253679268 45 24.723144517840197 25.38002898074452 25.747152546428076 24.149673954987215 46 24.01687269558628 27.44089226806211 24.66337696891948 23.878858067432134 47 23.213967359656813 25.496957394209346 27.24669428200508 24.042380964128764 48 24.28573356985891 26.161661910243478 26.80430270494707 22.748301814950544 49 24.822850195245312 25.512132021116006 26.147278598236856 23.517739185401823 50 22.73000847637902 25.54383116505293 26.488195676348482 25.23796468221957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 27.0 8 54.0 9 223.0 10 392.0 11 1346.5 12 2301.0 13 3827.5 14 5354.0 15 7477.0 16 9600.0 17 9015.5 18 8431.0 19 9394.0 20 10357.0 21 10850.0 22 11343.0 23 11946.0 24 12549.0 25 14278.0 26 16007.0 27 18805.0 28 21603.0 29 22032.5 30 22462.0 31 28101.0 32 33740.0 33 38811.5 34 43883.0 35 51971.5 36 60060.0 37 61156.5 38 62253.0 39 67338.0 40 72423.0 41 79014.5 42 85606.0 43 90039.5 44 94473.0 45 96305.5 46 98138.0 47 104670.0 48 111202.0 49 114834.5 50 118467.0 51 122429.5 52 126392.0 53 131792.0 54 137192.0 55 140674.0 56 144156.0 57 162792.0 58 181428.0 59 174938.0 60 168448.0 61 156011.0 62 143574.0 63 139101.0 64 134628.0 65 109802.5 66 84977.0 67 64986.5 68 44996.0 69 36158.0 70 27320.0 71 24439.0 72 21558.0 73 19080.0 74 16602.0 75 12768.5 76 8935.0 77 6618.0 78 4301.0 79 3039.5 80 1778.0 81 1342.0 82 906.0 83 624.0 84 342.0 85 190.5 86 39.0 87 41.0 88 43.0 89 25.5 90 8.0 91 5.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2148323.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.3386777441112745 #Duplication Level Percentage of deduplicated Percentage of total 1 65.80154117106684 4.828963057203301 2 10.739802604033946 1.5763190069274446 3 4.833002240861087 1.0640353794674156 4 2.5403443708846307 0.745710747879576 5 1.5124271366883444 0.5549607683802348 6 0.9120860173442435 0.4016103213719574 7 0.6498042780659286 0.3338092935429507 8 0.4374107694984186 0.2568013343322105 9 0.32932647506334833 0.21751387857846102 >10 5.04641434627967 10.182459370992794 >50 3.663257793931951 19.53809490455657 >100 3.3322844752334095 44.79059398855018 >500 0.14525682724445 7.16619909124039 >1k 0.05438840106869817 6.405839394422845 >5k 0.0019898195512938355 1.0246188859874084 >10k+ 6.632731837646117E-4 0.9124705765662686 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 18746 0.8725875950683394 No Hit TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 9252 0.4306614973632922 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 6705 0.31210390616308625 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCT 5093 0.23706863446511534 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 3710 0.17269283995004475 No Hit TGGATGGAGATTTCTAAAGAGACTTCTGGGCTGTTAAACTATAAAAGATG 3539 0.1647331430143419 No Hit TGGATGGGGGGGCCTTTCAGGAATACCACGACGCTACTCAGACTACCCAG 3198 0.14886029707823267 No Hit TGGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3191 0.1485344615311571 No Hit TGGATGGGGGGGGCTGGTGCGATGGCTCAGCGTGTAAGAACACCTGACTG 3183 0.14816207804878503 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 2974 0.13843355957181486 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCT 2953 0.13745605293058819 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTG 2710 0.12614490465353673 No Hit TGGATGGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGC 2568 0.11953509784143258 No Hit TGGATGGGGGGGCTGGCAAGATGGCTCAGCGGTTAAGAGCATTGTCTGCT 2478 0.11534578366474689 No Hit TGGATGGGGATTCGTGCAACACTGCAGTCATTGCTCCAGTTTAAATTACA 2296 0.1068740594407824 No Hit TGGATGGGGACTGGAGAGTGAGAGAGCTGTTCACAGTTCATCTGTGTCTA 2282 0.10622238834663131 No Hit TGGATGGGGGGTAGCTTAACAACCTCTGGATTGATTGTGTATAATTGTCT 2163 0.10068318404634685 No Hit TGGATGGGGGACTTAGGCTCCAACGTAACTGCAATTTAATGTTGGTAGTA 2152 0.10017115675808524 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 2.792876117790481E-4 0.0 0.0 0.0 0.0 8 6.982190294476203E-4 0.0 0.0 0.0 0.0 9 0.002187752958935877 0.0 0.0 0.0 0.0 10 0.010240545765231765 0.0 0.0 0.0 0.0 11 0.016152133547888282 0.0 0.0 0.0 0.0 12 0.019363941083347335 0.0 0.0 0.0 0.0 13 0.024530761901259728 0.0 0.0 0.0 0.0 14 0.03677286888424133 0.0 0.0 0.0 0.0 15 0.04943390728489152 0.0 0.0 0.0 0.0 16 0.06200184981494868 0.0 0.0 0.0 0.0 17 0.0702408343624306 0.0 0.0 0.0 0.0 18 0.07903839413347062 0.0 0.0 0.0 0.0 19 0.08927893989870238 0.0 0.0 0.0 0.0 20 0.0951439797460624 0.0 0.0 0.0 0.0 21 0.1038484436465094 0.0 0.0 0.0 0.0 22 0.11106337361746814 0.0 0.0 0.0 0.0 23 0.1160440026941945 0.0 0.0 0.0 0.0 24 0.1230261929886707 0.0 0.0 0.0 0.0 25 0.1275878906477285 0.0 0.0 0.0 0.0 26 0.13303399907741992 0.0 0.0 0.0 0.0 27 0.1382008198953323 0.0 0.0 0.0 0.0 28 0.14588122921925614 0.0 0.0 0.0 0.0 29 0.15156007732543011 0.0 0.0 0.0 0.0 30 0.1585422676199063 0.0 0.0 0.0 0.0 31 0.1648727868202314 0.0 0.0 0.0 0.0 32 0.17273938788534127 0.0 0.0 0.0 0.0 33 0.17888371534448033 0.0 0.0 0.0 0.0 34 0.18484185106243334 0.0 0.0 0.0 0.0 35 0.1968512183689324 0.0 0.0 0.0 0.0 36 0.2089536815460245 0.0 0.0 0.0 0.0 37 0.21868220002299468 0.0 0.0 0.0 0.0 38 0.22622296554102897 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAT 20 7.85801E-4 44.000004 16 AGGTACG 20 7.85801E-4 44.000004 22 GTTTCGC 40 8.3182385E-9 44.000004 31 ACGTTAT 20 7.85801E-4 44.000004 40 GCGCATT 20 7.85801E-4 44.000004 32 GTCACGC 20 7.85801E-4 44.000004 20 TCGTCTA 20 7.85801E-4 44.000004 22 GCGATAA 20 7.85801E-4 44.000004 33 CCGCGTA 40 8.3182385E-9 44.000004 38 GACGATA 20 7.85801E-4 44.000004 9 CGCGTAT 40 8.3182385E-9 44.000004 39 ATTGCGA 20 7.85801E-4 44.000004 44 CGATACG 20 7.85801E-4 44.000004 36 ATACCGG 20 7.85801E-4 44.000004 21 GCGTAGC 20 7.85801E-4 44.000004 44 TACGTCG 20 7.85801E-4 44.000004 32 TACGTAA 80 0.0 44.000004 42 TACCGGC 20 7.85801E-4 44.000004 22 CGACGTT 25 4.4441367E-5 44.0 17 CGTGATA 25 4.4441367E-5 44.0 18 >>END_MODULE