##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527248_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2281837 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3638445690906 33.0 31.0 34.0 31.0 34.0 2 32.73302869573944 34.0 31.0 34.0 31.0 34.0 3 33.11630979776382 34.0 34.0 34.0 31.0 34.0 4 35.294644183611716 35.0 35.0 37.0 33.0 37.0 5 35.94770047115548 37.0 35.0 37.0 35.0 37.0 6 36.23711816400558 37.0 37.0 37.0 35.0 37.0 7 36.6201577939178 37.0 37.0 37.0 35.0 37.0 8 36.65864213789153 37.0 37.0 37.0 35.0 37.0 9 38.61577141574968 39.0 39.0 39.0 38.0 39.0 10 37.982864244904434 39.0 38.0 39.0 35.0 39.0 11 37.18197837970021 39.0 35.0 39.0 34.0 39.0 12 37.06038774899346 39.0 37.0 39.0 34.0 39.0 13 36.982366838647984 39.0 35.0 39.0 33.0 39.0 14 37.72675787096099 40.0 37.0 40.0 33.0 40.0 15 37.668741018749365 40.0 36.0 40.0 33.0 40.0 16 32.674444756571134 39.0 34.0 40.0 3.0 40.0 17 34.291057599644496 39.0 34.0 40.0 17.0 40.0 18 36.304198766169534 39.0 34.0 40.0 30.0 40.0 19 37.22145403023967 39.0 35.0 40.0 32.0 40.0 20 37.470990697407395 39.0 36.0 40.0 33.0 40.0 21 37.68886384084402 40.0 36.0 40.0 33.0 40.0 22 37.74982700341874 40.0 36.0 40.0 34.0 40.0 23 37.77380724390042 40.0 36.0 40.0 34.0 40.0 24 37.73737650848855 40.0 36.0 40.0 34.0 40.0 25 37.69988785351452 40.0 36.0 40.0 34.0 40.0 26 37.62166798066645 40.0 36.0 40.0 34.0 40.0 27 37.51954324520113 40.0 35.0 40.0 34.0 40.0 28 37.45200161098273 40.0 35.0 40.0 33.0 40.0 29 37.273063325732736 40.0 35.0 40.0 33.0 40.0 30 37.30273810092483 40.0 35.0 40.0 33.0 40.0 31 37.267069909025054 40.0 35.0 40.0 33.0 40.0 32 37.19811932228288 39.0 35.0 40.0 33.0 40.0 33 36.85841057008016 39.0 35.0 40.0 32.0 40.0 34 36.731432613284824 39.0 35.0 40.0 31.0 40.0 35 36.70954980570479 39.0 35.0 40.0 31.0 40.0 36 36.77703972720225 39.0 35.0 40.0 32.0 40.0 37 36.572857745754845 39.0 35.0 40.0 31.0 40.0 38 36.59560476931525 39.0 35.0 40.0 31.0 40.0 39 36.238483292189585 38.0 35.0 40.0 31.0 40.0 40 36.26581477993388 38.0 35.0 40.0 31.0 40.0 41 36.21927245460565 38.0 35.0 40.0 31.0 40.0 42 36.20107527400073 38.0 35.0 40.0 31.0 40.0 43 36.12000243663329 38.0 35.0 40.0 31.0 40.0 44 36.37024949634878 39.0 35.0 40.0 31.0 40.0 45 36.42770758822826 39.0 35.0 40.0 31.0 40.0 46 36.36592140455256 39.0 35.0 40.0 32.0 40.0 47 36.10507236055862 38.0 35.0 40.0 31.0 40.0 48 36.09775807825011 38.0 35.0 40.0 31.0 40.0 49 36.059455605286445 38.0 35.0 40.0 31.0 40.0 50 35.60834538137474 38.0 35.0 40.0 30.0 40.0 51 35.6836592622523 37.0 35.0 40.0 30.0 40.0 52 35.35675379091495 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 11.0 15 27.0 16 82.0 17 169.0 18 279.0 19 628.0 20 988.0 21 1670.0 22 2620.0 23 4019.0 24 5905.0 25 8213.0 26 11433.0 27 16195.0 28 21855.0 29 29394.0 30 39725.0 31 53104.0 32 74091.0 33 114018.0 34 182796.0 35 182179.0 36 212837.0 37 380733.0 38 596649.0 39 342215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 98.84229241615418 1.0259716184810748 0.09260082994534667 0.03913513541940112 8 98.7714284587374 1.0448160845844818 0.1086843626429057 0.07507109403520058 9 93.2997405160842 3.4174658400227536 1.8574069926993033 1.4253866511937532 10 40.895909742895746 43.286133058583935 5.964974711164732 9.852982487355582 11 31.982433451644443 20.025532060353125 29.16983114920128 18.82220333880115 12 31.695033431397597 16.277148630686593 28.902371203552224 23.125446734363585 13 24.936925818978306 16.038305978910852 32.0220068304616 27.002761371649246 14 24.371986254934072 19.314394498818277 33.21043527648995 23.103183969757698 15 26.1779434727371 21.119080810767816 31.195961850035737 21.50701386645935 16 29.59308662275176 29.760451776353875 23.877034161511098 16.769427439383268 17 29.763782426176803 22.190980337333475 25.555199604529154 22.490037631960565 18 27.987844881119905 21.915018469768 27.08528260344626 23.01185404566584 19 26.633979552439545 23.89934075045676 26.663210387069714 22.80346931003398 20 27.278547941855617 24.032479094694317 27.46528345363845 21.223689509811614 21 27.023314987003893 23.435109519216315 28.296499706157803 21.24507578762199 22 25.07584897606621 22.5209337915022 30.08540925578821 22.31780797664338 23 25.912850041435913 22.44875510389217 30.884633740271543 20.75376111440037 24 26.936279848210017 23.46425270516693 27.05701590429115 22.5424515423319 25 25.671640875312303 25.05687303694348 25.08899627799882 24.182489809745395 26 25.19873242479634 24.29993904034337 25.817225332046068 24.68410320281422 27 23.061068779233572 21.72709970081123 28.811742468896774 26.400089051058423 28 23.782198290237208 24.769823611414836 26.45495712445718 24.993020973890772 29 27.085238779106486 24.71460494329788 25.209907631439055 22.990248646156584 30 26.587876346995863 22.439157573481367 27.717755475084328 23.255210604438442 31 26.65483993817262 23.238119111926046 26.41647935413441 23.69056159576692 32 29.12578768772704 23.052479208637603 26.83272293332083 20.989010170314533 33 30.211185110943507 22.46908959754794 26.626003522600435 20.693721768908123 34 24.77271601784001 24.264660446824205 30.036851887317106 20.925771648018678 35 22.959878378692256 28.01041441610422 29.332419449767883 19.697287755435642 36 24.23735788314415 29.880968710736134 25.568741325519746 20.312932080599975 37 25.927268249222006 28.287515716503854 24.80619781342839 20.97901822084575 38 25.826603740757992 27.49714374865514 25.755783607681003 20.92046890290586 39 26.028940717500852 26.580294736214725 24.362914616600573 23.027849929683846 40 24.133318900517434 25.41062310761023 26.025741540697254 24.43031645117508 41 22.211008060610816 27.865092905409107 25.406196849292918 24.517702184687163 42 22.202637611713723 25.728437219661178 26.76895851894767 25.29996664967743 43 22.22069323970117 24.948276322980124 26.838814516549604 25.9922159207691 44 23.487391956568327 24.21619072703265 25.946463310043615 26.349954006355407 45 24.7620667032746 25.32455210429141 25.69052916575549 24.222852026678503 46 23.794118510656105 27.54811145581389 24.608637689721043 24.049132343808957 47 23.339923053224222 25.44182603753029 27.27455992693606 23.94369098230943 48 24.397009952945805 26.147354083573894 26.696122466241018 22.759513497239286 49 24.763994974224715 25.381567570339158 26.216026824001894 23.638410631434233 50 22.79334588754587 25.580354775560217 26.283647780275277 25.342651556618634 51 21.500308742473717 25.959698260655777 28.082417806355142 24.45757519051536 52 21.693135837485325 25.646748650319896 28.244348741825114 24.41576677036966 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 28.5 8 57.0 9 213.0 10 369.0 11 1365.5 12 2362.0 13 3892.5 14 7613.0 15 9803.0 16 9168.5 17 8534.0 18 9688.5 19 10843.0 20 11085.0 21 11327.0 22 11570.5 23 11814.0 24 13535.5 25 15257.0 26 17450.5 27 19644.0 28 20275.0 29 20906.0 30 24879.5 31 28853.0 32 32364.5 33 35876.0 34 44522.0 35 53168.0 36 56322.5 37 59477.0 38 64425.0 39 74836.5 40 80300.0 41 82070.5 42 83841.0 43 88496.5 44 93152.0 45 98347.5 46 103543.0 47 108654.5 48 113766.0 49 117911.0 50 122056.0 51 126500.5 52 130945.0 53 133775.5 54 136606.0 55 147351.5 56 158097.0 57 176800.5 58 195504.0 59 183083.0 60 170662.0 61 160876.0 62 151090.0 63 144011.5 64 114714.5 65 92496.0 66 74008.0 67 55520.0 68 43122.0 69 30724.0 70 26053.0 71 21382.0 72 20566.0 73 19750.0 74 16429.0 75 13108.0 76 9061.5 77 5015.0 78 3641.0 79 2267.0 80 1781.0 81 1295.0 82 804.0 83 313.0 84 294.0 85 275.0 86 174.5 87 74.0 88 42.5 89 11.5 90 12.0 91 11.5 92 11.0 93 7.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2281837.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.240204474834561 #Duplication Level Percentage of deduplicated Percentage of total 1 68.46438286791957 5.641605140750175 2 10.200768318393925 1.6811283348796047 3 4.339138493250655 1.0726616528703283 4 2.2584823063589563 0.7444142402877502 5 1.253690252056224 0.5165332012525085 6 0.8136596446683554 0.4022833106993089 7 0.5583007806165987 0.32203588135183675 8 0.4026270743161774 0.265418353557577 9 0.30681684421489097 0.2275410179388747 >10 4.926026293702305 11.179493391049212 >50 3.430118047057771 20.342960680544312 >100 2.8738992990578995 42.76909474499176 >500 0.12169205757345254 6.6190247589337226 >1k 0.04793929540772374 6.2393911876955945 >5k 0.0018438190541432203 1.065820238354644 >10k+ 6.146063513810735E-4 0.9105938648427893 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 17980 0.7879616291610664 No Hit TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 9603 0.420845134862832 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6368 0.2790733956895256 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCT 5074 0.22236470002020303 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3636 0.15934529942322787 No Hit TGGATGGAGATTTCTAAAGAGACTTCTGGGCTGTTAAACTATAAAAGATGTT 3596 0.15759232583221325 No Hit TGGATGGGGGGGGCTGGTGCGATGGCTCAGCGTGTAAGAACACCTGACTGCT 3010 0.13191126272384926 No Hit TGGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2938 0.12875591026002295 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 2904 0.12726588270766054 No Hit TGGATGGGGGGGCCTTTCAGGAATACCACGACGCTACTCAGACTACCCAGAT 2890 0.12665234195080544 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCT 2810 0.12314639476877622 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTGCT 2747 0.1203854613629282 No Hit TGGATGGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTC 2400 0.10517841546087649 No Hit TGGATGGGGGGGCTGGCAAGATGGCTCAGCGGTTAAGAGCATTGTCTGCTCT 2377 0.10417045564604308 No Hit TGGATGGGGATTCGTGCAACACTGCAGTCATTGCTCCAGTTTAAATTACATG 2324 0.10184776563794873 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 8.76486795507304E-5 0.0 0.0 0.0 0.0 8 4.8206773752901717E-4 0.0 0.0 0.0 0.0 9 0.001314730193260956 0.0 0.0 0.0 0.0 10 0.009816652109681804 0.0 0.0 0.0 0.0 11 0.01551381628047928 0.0 0.0 0.0 0.0 12 0.01906358780228386 0.0 0.0 0.0 0.0 13 0.023577494799146476 0.0 0.0 0.0 0.0 14 0.03532241785894435 0.0 0.0 0.0 0.0 15 0.046892043559640766 0.0 0.0 0.0 0.0 16 0.06236203550034468 0.0 0.0 0.0 0.0 17 0.06994364628148286 0.0 0.0 0.0 0.0 18 0.07778820310127323 0.0 0.0 0.0 0.0 19 0.089401653141745 0.0 0.0 0.0 0.0 20 0.09615060146715125 0.0 0.0 0.0 0.0 21 0.10469634772334746 0.0 0.0 0.0 0.0 22 0.11420622945460171 0.0 0.0 0.0 0.0 23 0.12007869098450065 0.0 0.0 0.0 0.0 24 0.127441180066762 0.0 0.0 0.0 0.0 25 0.13278774951935654 0.0 0.0 0.0 0.0 26 0.13800284595262502 0.0 0.0 0.0 0.0 27 0.14475179427803125 0.0 0.0 0.0 0.0 28 0.15220193203984334 0.0 0.0 0.0 0.0 29 0.15798674489019154 0.0 0.0 0.0 0.0 30 0.16456039585649632 0.0 0.0 0.0 0.0 31 0.1701260870079677 0.0 0.0 0.0 0.0 32 0.17744475175045368 0.0 0.0 0.0 0.0 33 0.18388692969743237 0.0 0.0 0.0 0.0 34 0.188882904431824 0.0 0.0 0.0 0.0 35 0.20286286882016552 0.0 0.0 0.0 0.0 36 0.21460779187996337 0.0 0.0 0.0 0.0 37 0.22420532229076837 0.0 0.0 0.0 0.0 38 0.23226900080943555 0.0 0.0 0.0 0.0 39 0.2388864761155157 0.0 0.0 0.0 0.0 40 0.24624896519777706 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 20 6.3127687E-4 46.0 17 CGTATAG 245 0.0 46.0 32 TACGCCG 20 6.3127687E-4 46.0 42 AACGCGT 20 6.3127687E-4 46.0 18 GCGATAA 20 6.3127687E-4 46.0 33 TAAGGCG 25 3.418223E-5 46.0 37 CAGTACG 40 5.6152203E-9 46.0 19 CGGTAAC 20 6.3127687E-4 46.0 20 TCGACTA 25 3.418223E-5 46.0 10 TGTCGCG 40 5.6152203E-9 46.0 42 CGGACTA 20 6.3127687E-4 46.0 31 CCGCGTA 35 1.020162E-7 45.999996 38 CGCGTAT 35 1.020162E-7 45.999996 39 CGCGTAG 35 1.020162E-7 45.999996 45 TACCACG 370 0.0 44.756756 24 ACGTAAC 165 0.0 44.60606 23 CGTAACT 160 0.0 44.5625 24 TGGATGG 233030 0.0 44.48989 1 ATGGGGA 94440 0.0 44.37315 4 GATGGGG 215315 0.0 44.338947 3 >>END_MODULE