##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527247_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2218619 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35808311386498 33.0 31.0 34.0 31.0 34.0 2 32.72909183595741 34.0 31.0 34.0 31.0 34.0 3 33.07986048979117 34.0 33.0 34.0 31.0 34.0 4 35.32593653980246 35.0 35.0 37.0 33.0 37.0 5 35.97803904140368 37.0 35.0 37.0 35.0 37.0 6 36.22567507084362 37.0 37.0 37.0 35.0 37.0 7 36.62550532561021 37.0 37.0 37.0 35.0 37.0 8 36.68274363466643 37.0 37.0 37.0 35.0 37.0 9 38.56794609619768 39.0 39.0 39.0 38.0 39.0 10 37.97616129673459 39.0 38.0 39.0 35.0 39.0 11 37.10373209640772 39.0 35.0 39.0 34.0 39.0 12 37.012529415821284 39.0 35.0 39.0 34.0 39.0 13 36.88256748905513 39.0 35.0 39.0 33.0 39.0 14 37.65158641479226 40.0 36.0 40.0 33.0 40.0 15 37.77229618965672 40.0 36.0 40.0 33.0 40.0 16 37.87039099547962 40.0 37.0 40.0 34.0 40.0 17 37.81631185886356 40.0 36.0 40.0 34.0 40.0 18 37.790919035670385 40.0 36.0 40.0 34.0 40.0 19 37.77339822655445 40.0 36.0 40.0 34.0 40.0 20 37.72049639888597 40.0 36.0 40.0 33.0 40.0 21 33.5060467795507 39.0 34.0 40.0 10.0 40.0 22 34.25435146818809 39.0 34.0 40.0 17.0 40.0 23 36.36174124534226 39.0 34.0 40.0 30.0 40.0 24 37.13374175556957 39.0 35.0 40.0 32.0 40.0 25 37.424619098637486 39.0 35.0 40.0 33.0 40.0 26 37.511468620795185 40.0 35.0 40.0 34.0 40.0 27 37.4881275243744 40.0 35.0 40.0 34.0 40.0 28 37.43596940258782 40.0 35.0 40.0 33.0 40.0 29 37.43879097763068 40.0 35.0 40.0 33.0 40.0 30 37.38202999253139 40.0 35.0 40.0 33.0 40.0 31 37.246078754396315 40.0 35.0 40.0 33.0 40.0 32 37.20838233153146 40.0 35.0 40.0 33.0 40.0 33 36.893079433647685 39.0 35.0 40.0 32.0 40.0 34 36.754363412555286 39.0 35.0 40.0 31.0 40.0 35 36.72726141802626 39.0 35.0 40.0 31.0 40.0 36 36.72589435139607 39.0 35.0 40.0 32.0 40.0 37 36.72670025813355 39.0 35.0 40.0 32.0 40.0 38 36.68311503687654 39.0 35.0 40.0 32.0 40.0 39 36.53992956879933 39.0 35.0 40.0 31.0 40.0 40 31.691771773341884 37.0 31.0 40.0 9.0 40.0 41 32.60991634886386 37.0 31.0 40.0 15.0 40.0 42 34.49221069503146 37.0 32.0 40.0 24.0 40.0 43 35.389861891564074 37.0 34.0 40.0 29.0 40.0 44 36.082118200556295 38.0 35.0 40.0 31.0 40.0 45 36.31350673549627 39.0 35.0 40.0 31.0 40.0 46 36.347668076402485 39.0 35.0 40.0 32.0 40.0 47 36.32323891573993 39.0 35.0 40.0 31.0 40.0 48 36.220193282397744 38.0 35.0 40.0 31.0 40.0 49 36.12384280491603 38.0 35.0 40.0 31.0 40.0 50 36.052497522107224 38.0 35.0 40.0 31.0 40.0 51 35.87132265612077 38.0 35.0 40.0 31.0 40.0 52 35.49564751766752 37.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 8.0 15 21.0 16 76.0 17 185.0 18 339.0 19 654.0 20 1045.0 21 1800.0 22 2896.0 23 4302.0 24 6146.0 25 8673.0 26 11889.0 27 17102.0 28 22669.0 29 31625.0 30 42855.0 31 60657.0 32 86285.0 33 94670.0 34 195631.0 35 216143.0 36 260378.0 37 234483.0 38 572373.0 39 345711.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 98.85230406843176 1.0232040742461863 0.0859994437981465 0.03849241352390834 8 98.8001545105311 1.0384838496379956 0.08780236714821248 0.07355927268269136 9 93.29033060656201 3.3955356913467343 1.8836041699814163 1.4305295321098395 10 40.9130184137069 43.30103546395303 5.947934278035119 9.83801184430495 11 32.12052182010521 19.98220514653485 29.091204934240622 18.806068099119315 12 31.69259796296705 16.287158813658404 28.9224963817582 23.097746841616342 13 25.10859232702866 16.035200275486687 31.97299761698606 26.88320978049859 14 24.366148491471495 19.351767924100532 33.15823942731942 23.123844157108543 15 26.13359932462491 20.990985833980506 31.242047417785567 21.63336742360901 16 31.239838836681738 22.170773801179923 27.217066111847053 19.372321250291286 17 29.770907037215494 22.21499049634029 25.507894775984518 22.506207690459696 18 28.006385954505937 21.927784806674783 27.053586037079825 23.01224320173946 19 26.70206105690071 23.929931186923035 26.632603434839417 22.735404321336834 20 27.27759926332552 24.152952805326198 27.356747598393415 21.21270033295487 21 31.972772251567307 22.333081975769613 26.450598322650258 19.243547450012823 22 25.189859097032887 22.589637968484 29.97125689449157 22.249246039991544 23 25.984452490490707 22.431566663766965 30.84414223442601 20.73983861131632 24 27.051242236724736 23.452336791490563 27.000535017504134 22.495885954280567 25 25.70950667960565 25.105752722752307 25.098090298514524 24.08665029912752 26 25.278472779688627 24.32576300843002 25.746962412203267 24.64880179967809 27 23.072370695464162 21.72784060715247 28.86128713402346 26.338501563359912 28 23.802509579157125 24.786860655209388 26.343594821823846 25.06703494380964 29 26.954244960491184 24.755264423499483 25.31673982779378 22.973750788215554 30 26.654103295788957 22.44211376536485 27.721839576781772 23.18194336206442 31 26.77264550605579 23.2879552550483 26.275534465358856 23.663864773537053 32 29.161383725641944 23.086749009180938 26.791846639733997 20.960020625443125 33 30.1701644130876 22.52824842841425 26.589738932191604 20.711848226306547 34 24.8459514680078 24.35334773568603 29.975719129782984 20.824981666523186 35 23.054386535047254 27.984615655053886 29.24278571489742 19.718212095001437 36 24.282267482609676 29.875161079933054 25.554229906081215 20.28834153137605 37 25.777792401489396 28.44327935531067 24.792765229180855 20.986163014019084 38 25.858157709818585 27.52383351986078 25.713743549478302 20.904265220842337 39 25.78229970986456 26.713870204843644 24.367816195570306 23.13601388972149 40 25.2312361879169 29.514260898333607 23.56380252760839 21.69070038614111 41 22.238698938393657 27.88130814709511 25.3816901414799 24.498302773031334 42 22.228241982963276 25.780496786514494 26.705171099679575 25.286090130842652 43 22.2357691879498 24.936277927846106 26.841021374107044 25.986931510097044 44 23.49087427809822 24.269692092242966 25.909225513709206 26.330208115949606 45 24.752605111558136 25.35320395254886 25.663216622592707 24.2309743133003 46 23.788807361696623 27.559801840694593 24.558024609002267 24.093366188606517 47 23.120418602743417 25.560720430141455 27.213865922900688 24.10499504421444 48 24.350147546739663 26.176689192691487 26.751461156692518 22.72170210387633 49 24.856994373526955 25.431135314355462 26.158389520688317 23.553480791429262 50 22.6935764996153 25.661774283912653 26.33985375587246 25.30479546059959 51 21.529879623315225 26.07108295746138 27.9629805748531 24.436056844370306 52 21.69065531305736 25.718746661774734 28.292104232407638 24.29849379276027 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 25.5 8 50.0 9 191.5 10 333.0 11 1224.0 12 2115.0 13 3646.5 14 7047.0 15 8916.0 16 8492.5 17 8069.0 18 9229.0 19 10389.0 20 10640.0 21 10891.0 22 11302.0 23 11713.0 24 13209.5 25 14706.0 26 16767.5 27 18829.0 28 19537.0 29 20245.0 30 24046.5 31 27848.0 32 31172.5 33 34497.0 34 42389.0 35 50281.0 36 53821.5 37 57362.0 38 61997.0 39 72401.0 40 78170.0 41 79580.0 42 80990.0 43 85594.5 44 90199.0 45 95430.5 46 100662.0 47 105521.5 48 110381.0 49 114458.0 50 118535.0 51 122558.0 52 126581.0 53 129461.0 54 132341.0 55 141552.0 56 150763.0 57 170945.5 58 191128.0 59 179317.5 60 167507.0 61 157808.0 62 148109.0 63 141782.0 64 113094.0 65 90733.0 66 73157.0 67 55581.0 68 43108.0 69 30635.0 70 25925.0 71 21215.0 72 20283.0 73 19351.0 74 16238.0 75 13125.0 76 9068.0 77 5011.0 78 3562.5 79 2114.0 80 1688.0 81 1262.0 82 803.0 83 344.0 84 319.0 85 294.0 86 171.0 87 48.0 88 27.0 89 10.0 90 14.0 91 10.5 92 7.0 93 5.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2218619.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.448810274363371 #Duplication Level Percentage of deduplicated Percentage of total 1 68.9104528592565 5.8221134212831895 2 10.064782181384158 1.700708702066157 3 4.114923353754833 1.0429862012826483 4 2.1949512314100086 0.7417890606265366 5 1.2390158962109652 0.5234105117003371 6 0.7836502199351715 0.39725472178172344 7 0.5353214901907781 0.3165980794487949 8 0.38993017650327727 0.26355568652201694 9 0.3013238122024157 0.22912449484014974 >10 5.113608963226405 12.037596273656476 >50 3.4633248557384326 21.108402264534064 >100 2.728300420098631 41.634073304727245 >500 0.11717780858025814 6.6301757863477455 >1k 0.0413568736165617 5.834512338485564 >5k 0.0012532385944412636 0.8237755837870477 >10k+ 6.266192972206318E-4 0.8939235689103021 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 16885 0.7610590191465952 No Hit TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 9324 0.4202614329003763 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6236 0.28107575027528386 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCT 4807 0.21666631359417726 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3663 0.1651027057822907 No Hit TGGATGGAGATTTCTAAAGAGACTTCTGGGCTGTTAAACTATAAAAGATGTT 3141 0.14157455606392985 No Hit TGGATGGGGGGGGCTGGTGCGATGGCTCAGCGTGTAAGAACACCTGACTGCT 3043 0.13715739385626824 No Hit TGGATGGGGGGGCCTTTCAGGAATACCACGACGCTACTCAGACTACCCAGAT 2968 0.13377691257489457 No Hit TGGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2891 0.13030628512601758 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 2856 0.12872872719470985 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTGCT 2773 0.12498766124332299 No Hit TGGATGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCT 2666 0.12016484128189653 No Hit TGGATGGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTC 2349 0.10587667373262377 No Hit TGGATGGGGGGGCTGGCAAGATGGCTCAGCGGTTAAGAGCATTGTCTGCTCT 2282 0.10285677712126327 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 2.2536541875824555E-4 0.0 0.0 0.0 0.0 8 9.916078425362804E-4 0.0 0.0 0.0 0.0 9 0.002073361852575859 0.0 0.0 0.0 0.0 10 0.011313344021663927 0.0 0.0 0.0 0.0 11 0.016992552574371714 0.0 0.0 0.0 0.0 12 0.02077869160951024 0.0 0.0 0.0 0.0 13 0.025646584654688345 0.0 0.0 0.0 0.0 14 0.03889807127767318 0.0 0.0 0.0 0.0 15 0.05034663455059206 0.0 0.0 0.0 0.0 16 0.06391363275983844 0.0 0.0 0.0 0.0 17 0.0704041568200759 0.0 0.0 0.0 0.0 18 0.0789229696491376 0.0 0.0 0.0 0.0 19 0.0885686095719905 0.0 0.0 0.0 0.0 20 0.09447318354345653 0.0 0.0 0.0 0.0 21 0.1011439999387006 0.0 0.0 0.0 0.0 22 0.1116911015365865 0.0 0.0 0.0 0.0 23 0.11723509083803933 0.0 0.0 0.0 0.0 24 0.12458200348955814 0.0 0.0 0.0 0.0 25 0.13035135820976923 0.0 0.0 0.0 0.0 26 0.13603056676247702 0.0 0.0 0.0 0.0 27 0.14175484839893646 0.0 0.0 0.0 0.0 28 0.15000322272548824 0.0 0.0 0.0 0.0 29 0.1550964811894246 0.0 0.0 0.0 0.0 30 0.1624433938409434 0.0 0.0 0.0 0.0 31 0.16753665230487974 0.0 0.0 0.0 0.0 32 0.1746581995376403 0.0 0.0 0.0 0.0 33 0.18096843126287118 0.0 0.0 0.0 0.0 34 0.18610676281055918 0.0 0.0 0.0 0.0 35 0.19782576458598794 0.0 0.0 0.0 0.0 36 0.2072460390900826 0.0 0.0 0.0 0.0 37 0.215674705751641 0.0 0.0 0.0 0.0 38 0.22297654531940816 0.0 0.0 0.0 0.0 39 0.228520534620861 0.0 0.0 0.0 0.0 40 0.23690412819866774 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 55 1.8189894E-12 46.000004 20 AGTATCG 20 6.312729E-4 46.000004 36 GCGTAAT 20 6.312729E-4 46.000004 11 TACGTAA 80 0.0 46.000004 42 CGCTAGT 50 1.6370905E-11 46.0 43 CGTAACT 225 0.0 46.0 24 TACCACG 365 0.0 45.369865 24 TGGATGG 226930 0.0 44.45133 1 ATGGGGA 92760 0.0 44.316406 4 GATGGGG 210105 0.0 44.296665 3 GGATGGG 225305 0.0 44.23599 2 CACGACG 360 0.0 44.083332 27 ATGGGGG 86825 0.0 44.08212 4 TGGGGGG 35515 0.0 43.577927 5 CGTAGCG 75 0.0 42.93333 41 TGGGGAG 28580 0.0 42.676346 5 ATGGGGT 11235 0.0 42.663105 4 TGGGGAC 17385 0.0 42.560257 5 ATGGGGC 21055 0.0 42.24222 4 CACGTTA 60 1.8189894E-12 42.166668 14 >>END_MODULE