##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527242_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2715323 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14431911047047 33.0 31.0 34.0 31.0 34.0 2 32.51300453021611 34.0 31.0 34.0 31.0 34.0 3 32.68619571225965 34.0 31.0 34.0 31.0 34.0 4 36.30596139022871 37.0 37.0 37.0 35.0 37.0 5 35.160931498757236 35.0 35.0 37.0 33.0 37.0 6 35.97763433668849 37.0 35.0 37.0 35.0 37.0 7 36.55978386365084 37.0 37.0 37.0 35.0 37.0 8 36.602005728231966 37.0 37.0 37.0 35.0 37.0 9 38.54551410642491 39.0 39.0 39.0 37.0 39.0 10 37.7661699915627 39.0 37.0 39.0 35.0 39.0 11 37.15830750153849 39.0 37.0 39.0 34.0 39.0 12 37.17116527205051 39.0 37.0 39.0 34.0 39.0 13 37.07119926432325 39.0 37.0 39.0 33.0 39.0 14 37.95987328211045 40.0 38.0 40.0 34.0 40.0 15 37.908090492365 40.0 38.0 40.0 34.0 40.0 16 32.78056533237482 39.0 34.0 40.0 3.0 40.0 17 34.38203042510965 39.0 34.0 40.0 17.0 40.0 18 36.46784305218937 39.0 34.0 40.0 30.0 40.0 19 37.20618651998307 39.0 36.0 40.0 32.0 40.0 20 37.68347301591744 39.0 37.0 40.0 33.0 40.0 21 37.89914349047977 40.0 37.0 40.0 34.0 40.0 22 37.83983489257079 40.0 37.0 40.0 34.0 40.0 23 37.74188006362411 40.0 37.0 40.0 33.0 40.0 24 37.7266454119823 40.0 37.0 40.0 34.0 40.0 25 37.62377256775713 40.0 36.0 40.0 33.0 40.0 26 37.45446232363516 40.0 36.0 40.0 33.0 40.0 27 37.41507916369434 40.0 36.0 40.0 33.0 40.0 28 37.33618689194619 40.0 36.0 40.0 33.0 40.0 29 37.130575257529216 40.0 35.0 40.0 33.0 40.0 30 37.050030880304114 39.0 35.0 40.0 32.0 40.0 31 36.94583406835945 39.0 35.0 40.0 32.0 40.0 32 36.71418759388846 39.0 35.0 40.0 32.0 40.0 33 36.391311088957 39.0 35.0 40.0 31.0 40.0 34 36.19405499824514 39.0 35.0 40.0 30.0 40.0 35 36.289270926515925 39.0 35.0 40.0 30.0 40.0 36 36.23768074737333 39.0 35.0 40.0 31.0 40.0 37 35.80678504914517 38.0 35.0 40.0 30.0 40.0 38 35.7759688258082 38.0 35.0 40.0 30.0 40.0 39 35.37538480689038 38.0 35.0 40.0 28.0 40.0 40 35.207942480507846 38.0 34.0 40.0 28.0 40.0 41 35.18193857599998 38.0 34.0 40.0 28.0 40.0 42 35.020492221367405 37.0 34.0 40.0 27.0 40.0 43 34.878553306549534 37.0 34.0 40.0 27.0 40.0 44 35.13593410434044 37.0 35.0 40.0 28.0 40.0 45 35.05043709348759 37.0 35.0 40.0 27.0 40.0 46 34.95443856955508 37.0 35.0 40.0 27.0 40.0 47 34.65786501274434 37.0 34.0 40.0 25.0 40.0 48 34.584251302699535 37.0 34.0 40.0 25.0 40.0 49 34.447105924414885 36.0 34.0 40.0 24.0 40.0 50 33.85102729951464 36.0 34.0 40.0 22.0 40.0 51 33.88752498321563 36.0 34.0 40.0 23.0 40.0 52 33.51818512935662 35.0 33.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 3.0 14 13.0 15 43.0 16 95.0 17 213.0 18 479.0 19 898.0 20 1695.0 21 3128.0 22 5323.0 23 8160.0 24 12275.0 25 17782.0 26 25534.0 27 35186.0 28 42618.0 29 51296.0 30 58436.0 31 69110.0 32 90115.0 33 129905.0 34 201419.0 35 228928.0 36 313948.0 37 494223.0 38 637946.0 39 286551.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.18190211624915 0.48642463530121466 0.27322716302996 0.058446085419671986 8 98.50584994860648 0.749118981425046 0.34975581173952414 0.3952752582289473 9 92.78093250784529 3.4276953423220737 1.9890451338570032 1.8023270159756317 10 40.95033997796948 42.65116894012241 6.731758984106126 9.666732097801994 11 24.903151485108772 25.549851711932615 28.44777582630133 21.09922097665729 12 32.71028897851195 16.796381130348028 30.563030622876177 19.93029926826385 13 27.94908745663039 16.6313547228083 29.424639352298048 25.99491846826326 14 23.824090172697687 22.887000920332497 28.08115277629954 25.207756130670273 15 27.31837059532144 20.968444638078047 30.55872174323276 21.154463023367754 16 28.83929462535396 30.575404841339314 25.13100651377387 15.454294019532853 17 30.97115886397309 21.399074806201693 29.292021612161793 18.337744717663423 18 33.42791999331203 20.518074645263194 26.335430444186564 19.718574917238207 19 29.877808275479566 21.737819036630267 28.891590429573206 19.492782258316964 20 30.32129142647118 24.173993296561772 25.412630467903817 20.09208480906323 21 29.007856523883163 22.13685075403552 30.099881303255632 18.75541141882568 22 27.07729430347697 23.27229578212242 25.880088667167772 23.770321247232832 23 23.265887704704006 28.118570055938097 27.32790905538678 21.287633183971117 24 25.25728983255399 26.707135762485716 28.12044828552625 19.915126119434042 25 26.483368645277196 24.570299739662648 25.354957771138093 23.591373843922067 26 27.404585016220906 26.60085006461478 26.043089532994784 19.95147538616953 27 25.269553566923715 24.31511831189144 25.743677639824064 24.671650481360782 28 25.61584754373605 28.688262869647552 24.992533116686303 20.703356469930096 29 30.038231179126758 25.879794042918654 23.79602721296877 20.285947564985822 30 26.30714651627081 28.982187386178364 24.651873828638436 20.05879226891239 31 27.475405320103725 27.59244480306763 24.43153171832596 20.50061815850269 32 24.91165876030218 28.55240426277095 27.056375981789277 19.479560995137597 33 28.191821009876172 27.521882295402794 24.56565940773897 19.720637286982065 34 22.647766030045045 29.826580484163394 26.38794721659265 21.137706269198915 35 21.762051881120588 33.56263693122328 26.657565232570857 18.01774595508527 36 24.731680172119486 32.97755000049718 25.103348662387493 17.18742116499584 37 24.620901454449434 31.28242938317099 25.341699679927583 18.754969482451997 38 24.518630011972792 31.903644612445735 24.4790767065281 19.098648669053368 39 24.194543337938065 30.910392612591576 23.774188190502564 21.120875858967793 40 23.728484603857442 30.7799477262926 25.36545376001308 20.126113909836878 41 23.33541902749691 31.86821604648876 23.90665861851426 20.889706307500067 42 21.521343869587522 31.12664681144748 23.449806892218717 23.902202426746282 43 22.04603282924352 30.279086502784384 25.747581411124937 21.92729925684716 44 23.24132340793342 30.891057896242913 24.356439362830866 21.511179332992796 45 22.733280718352844 31.525678528852737 25.00266082524989 20.738379927544532 46 24.315744388420825 32.70918413757774 23.52593043258574 19.4491410414157 47 23.814625368694628 30.548778174824875 24.49947943577983 21.137117020700668 48 24.11672570813859 30.489521872720115 25.05381496050378 20.339937458637518 49 24.54337844889908 31.939404630682976 24.33982992078659 19.177386999631352 50 21.96659476607387 32.37029259502461 24.936038916917067 20.727073721984457 51 20.6227767377951 33.13730999958384 25.716535380873655 20.5233778817474 52 22.762227550829127 32.09375090919202 24.478782082278975 20.665239457699876 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 18.5 8 37.0 9 117.0 10 197.0 11 1640.5 12 3084.0 13 9717.5 14 12869.5 15 9388.0 16 11025.5 17 12663.0 18 12732.0 19 12801.0 20 13034.5 21 13268.0 22 13888.5 23 14509.0 24 14632.5 25 14756.0 26 16965.0 27 19174.0 28 24637.5 29 30101.0 30 37587.5 31 45074.0 32 46949.5 33 48825.0 34 57569.5 35 66314.0 36 76705.0 37 87096.0 38 96603.5 39 113743.5 40 121376.0 41 108164.5 42 94953.0 43 97440.5 44 99928.0 45 103224.0 46 106520.0 47 109520.0 48 112520.0 49 116650.0 50 120780.0 51 128521.5 52 136263.0 53 137443.5 54 138624.0 55 149640.0 56 160656.0 57 164593.0 58 168530.0 59 178133.5 60 187737.0 61 187617.5 62 187498.0 63 176370.0 64 156005.5 65 146769.0 66 127557.5 67 108346.0 68 86306.5 69 64267.0 70 51930.0 71 39593.0 72 30816.0 73 22039.0 74 19072.0 75 16105.0 76 13522.0 77 10939.0 78 7609.0 79 4279.0 80 2791.5 81 1304.0 82 982.0 83 660.0 84 546.5 85 433.0 86 304.5 87 176.0 88 97.5 89 13.0 90 7.0 91 5.5 92 4.0 93 4.5 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2715323.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.90105876196167 #Duplication Level Percentage of deduplicated Percentage of total 1 72.79239303317668 9.390989399448218 2 9.58182662533285 2.4723141668069593 3 4.081916937150706 1.5798315080288359 4 2.214670885333339 1.1428639692036435 5 1.3101999097598822 0.8451483012864559 6 0.8819834325273737 0.6827112054067382 7 0.6465337571237323 0.5838678994571588 8 0.44322592366153357 0.45744669487857453 9 0.38553717803751053 0.44764540099045214 >10 3.9806043550432353 12.816467749918353 >50 1.9421744762993458 17.926394954860182 >100 1.6467592635359325 37.89120416165848 >500 0.06611790555708144 5.878956732793865 >1k 0.024102093651349882 5.236734357826769 >5k 9.771119047844547E-4 0.9395086418404417 >10k+ 9.771119047844547E-4 1.7079148555949102 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGCTGTGGGGAAG 14310 0.5270091256178363 No Hit GCTGTGGGGGAGTGCAGTGCTGCTGTGGGGAAAAAAAAAAAAAAAAAAAAAA 13382 0.49283271271962853 No Hit GCTGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12954 0.4770703153915759 No Hit GCTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 9214 0.3393334789268164 No Hit GCTGTGGGGGCTGCTGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6666 0.2454956555813065 No Hit GCTGTGGGGAGTGCAGTGCTGCTGTGGGGAAAAAAAAAAAAAAAAAAAAAAA 6479 0.23860881375806858 No Hit GCTGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4609 0.16974039552568884 No Hit GCTGTGGGGACAGTCTTGTTAGATTTACTTTCCGTGAAGAAGTAGCGCCTCA 4176 0.1537938580419346 No Hit GCTGTGGCCGGGGACTCCCGATTGCATTCACTCTTAACCAAGCTCCAATAAA 3803 0.14005700242659896 No Hit GCTGTGGGGATGAATACACGGAAACAACTGTCATTTTCTTGTGTTATTTTTT 3690 0.13589543490774394 No Hit GCTGTGGGGATGTCATAAATAGTTAATTGACATTGAGTTGAAGCAGTCATAC 3603 0.13269139619853698 No Hit GCTGTGGGGGTGCAACACTGCAGTCATTGCTCCAGTTTAAATTACATGTGTG 3282 0.12086959820249747 No Hit GCTGTGGGGATATTCCAAATTAACTAGGCCTATCTGGTTTCTTTCACTTGAA 3181 0.11714996705732615 No Hit GCTGTGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3024 0.11136796616829747 No Hit GCTGTGGGGGCTGCTGTGGGGGTCTCTTTTATAACTTTACCTTTTAACTAAA 2798 0.1030448311305874 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 7.733886539465102E-4 0.0 0.0 0.0 0.0 8 0.0018414015570155005 0.0 0.0 0.0 0.0 9 0.007255122134641072 0.0 0.0 0.0 0.0 10 0.03476566139645265 0.0 0.0 0.0 0.0 11 0.059366786198179734 0.0 0.0 0.0 0.0 12 0.07461359109026808 0.0 0.0 0.0 0.0 13 0.08326817840824094 0.0 0.0 0.0 0.0 14 0.11943330498802536 0.0 0.0 0.0 0.0 15 0.13703710387309356 0.0 0.0 0.0 0.0 16 0.16384791054323924 0.0 0.0 0.0 0.0 17 0.1758538486949803 0.0 0.0 0.0 0.0 18 0.1898116724971578 0.0 0.0 0.0 0.0 19 0.20789423578705002 0.0 0.0 0.0 0.0 20 0.22546120664097788 0.0 0.0 0.0 0.0 21 0.24498006314534218 0.0 0.0 0.0 0.0 22 0.26468305980540807 0.0 0.0 0.0 0.0 23 0.28777423533038243 0.0 0.0 0.0 0.0 24 0.3108654108553568 0.0 0.0 0.0 0.0 25 0.3291321143009506 0.0 0.0 0.0 0.0 26 0.34677274121715906 0.0 0.0 0.0 0.0 27 0.36758057881143424 0.0 0.0 0.0 0.0 28 0.44458799192582243 0.0 0.0 0.0 0.0 29 0.46193399459290846 0.0 0.0 0.0 0.0 30 0.49647868780251925 0.0 0.0 0.0 0.0 31 0.5204537360748611 0.0 0.0 0.0 0.0 32 0.5458282495305347 0.0 0.0 0.0 0.0 33 0.5703557182699811 0.0 0.0 0.0 0.0 34 0.5981240537497748 0.0 0.0 0.0 0.0 35 0.7236339838759515 0.0 0.0 0.0 0.0 36 0.7565582437153886 0.0 0.0 0.0 0.0 37 0.7833690503855343 0.0 0.0 0.0 0.0 38 0.8113215260210296 0.0 0.0 0.0 0.0 39 0.8371379758503869 0.0 0.0 0.0 0.0 40 0.8654219037661449 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAA 55 1.8189894E-12 46.000004 20 AACGTCG 45 3.110472E-10 46.0 35 CGTATAG 100 0.0 46.0 31 ACCGCTA 20 6.3129805E-4 46.0 33 ATTCGGC 25 3.4183955E-5 46.0 39 GTTACGC 30 1.8623468E-6 46.0 32 ACGATAG 25 3.4183955E-5 46.0 38 TACGCCG 20 6.3129805E-4 46.0 15 CTACCGA 25 3.4183955E-5 46.0 38 TACTCGA 20 6.3129805E-4 46.0 11 CGTCGAT 30 1.8623468E-6 46.0 32 ACGACGT 25 3.4183955E-5 46.0 15 TACGTCG 30 1.8623468E-6 46.0 44 TACGTAA 40 5.6170393E-9 46.0 37 TACCGAC 20 6.3129805E-4 46.0 13 CGACCGT 35 1.020253E-7 45.999996 15 TCGATCA 60 1.8189894E-12 42.166668 20 CCGTATA 120 0.0 42.166668 30 TGGGGAT 40340 0.0 42.100147 5 CACGGAA 440 0.0 41.818184 17 >>END_MODULE