##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527231_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2972515 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45464598160144 33.0 31.0 34.0 31.0 34.0 2 32.83755910399106 34.0 31.0 34.0 31.0 34.0 3 33.032769893507684 34.0 31.0 34.0 31.0 34.0 4 36.35093750578214 37.0 37.0 37.0 35.0 37.0 5 36.30145617431703 37.0 37.0 37.0 35.0 37.0 6 36.46001786366091 37.0 37.0 37.0 35.0 37.0 7 36.52898976119548 37.0 37.0 37.0 35.0 37.0 8 36.64953145736859 37.0 37.0 37.0 35.0 37.0 9 38.754049685199234 39.0 39.0 39.0 39.0 39.0 10 38.27496480253254 39.0 39.0 39.0 37.0 39.0 11 37.95582057617876 39.0 38.0 39.0 35.0 39.0 12 37.50074600128174 39.0 37.0 39.0 35.0 39.0 13 37.332362662593795 39.0 37.0 39.0 35.0 39.0 14 38.16092870851787 40.0 38.0 40.0 35.0 40.0 15 38.17086507553368 40.0 38.0 40.0 35.0 40.0 16 38.0576817947092 40.0 38.0 40.0 34.0 40.0 17 38.114801102769874 40.0 38.0 40.0 34.0 40.0 18 38.1130090176164 40.0 38.0 40.0 34.0 40.0 19 38.02660070680888 40.0 38.0 40.0 34.0 40.0 20 37.80732578304904 40.0 38.0 40.0 33.0 40.0 21 37.99993036199986 40.0 38.0 40.0 34.0 40.0 22 37.863409267909496 40.0 38.0 40.0 34.0 40.0 23 37.91518730771754 40.0 38.0 40.0 34.0 40.0 24 37.89629286984254 40.0 37.0 40.0 34.0 40.0 25 37.83001195956959 40.0 37.0 40.0 34.0 40.0 26 37.66998585372992 40.0 37.0 40.0 34.0 40.0 27 37.53251034898058 40.0 37.0 40.0 33.0 40.0 28 37.32748463842908 40.0 36.0 40.0 33.0 40.0 29 37.52893828963016 40.0 37.0 40.0 33.0 40.0 30 37.53706608713497 40.0 37.0 40.0 33.0 40.0 31 37.504647074951684 40.0 37.0 40.0 33.0 40.0 32 36.76051727241074 40.0 35.0 40.0 31.0 40.0 33 36.92311426519294 40.0 35.0 40.0 31.0 40.0 34 36.83262355278274 40.0 35.0 40.0 31.0 40.0 35 36.874626368580145 40.0 35.0 40.0 32.0 40.0 36 36.64443442673964 39.0 35.0 40.0 31.0 40.0 37 36.52080544589346 39.0 35.0 40.0 31.0 40.0 38 36.306362120964906 39.0 35.0 40.0 30.0 40.0 39 36.22009308615768 39.0 35.0 40.0 30.0 40.0 40 36.052874417790996 39.0 35.0 40.0 30.0 40.0 41 35.83485600577289 38.0 35.0 40.0 30.0 40.0 42 35.727030813974025 38.0 35.0 40.0 29.0 40.0 43 35.59765888481639 38.0 35.0 40.0 29.0 40.0 44 35.42721029162174 37.0 35.0 40.0 29.0 40.0 45 35.269835476019466 37.0 35.0 40.0 28.0 40.0 46 35.00542604494847 37.0 34.0 40.0 27.0 40.0 47 34.862625756304006 36.0 34.0 40.0 27.0 40.0 48 34.695055533781996 36.0 34.0 40.0 27.0 40.0 49 34.35916858283306 35.0 34.0 40.0 26.0 40.0 50 33.95495464278565 35.0 33.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 12.0 14 14.0 15 28.0 16 83.0 17 209.0 18 492.0 19 983.0 20 1881.0 21 3097.0 22 4386.0 23 6372.0 24 9363.0 25 13120.0 26 17623.0 27 23774.0 28 31960.0 29 41343.0 30 51905.0 31 63955.0 32 76398.0 33 96977.0 34 170060.0 35 224097.0 36 270612.0 37 491208.0 38 894523.0 39 478035.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.59636873152868 0.276567149366782 0.10721560698600344 0.019848512118525893 8 99.56047320198552 0.30062085473075834 0.05396103972561955 0.0849449035580981 9 98.58547391686837 0.6343113491437385 0.346171507965477 0.43404322602240863 10 64.29434334225394 22.585689222762543 5.05255650518164 8.067410929801868 11 35.14088238410908 27.223916447856446 17.61309867233639 20.02210249569809 12 30.687279963263432 16.71894002216978 26.81668553396703 25.77709448059976 13 23.045434589901145 17.76223164559304 30.491822581214894 28.700511183290917 14 25.606195427104655 17.813736852463318 31.28646953842117 25.293598182010857 15 25.461637704099054 17.080216584272915 28.39972212083034 29.058423590797695 16 29.71137235640527 17.19315125407273 26.797812626681445 26.297663762840557 17 32.14200769382156 17.431568890316782 23.147435757262787 27.278987658598865 18 30.786186108396425 17.74194579337699 24.203174752692586 27.268693345534 19 31.420867514545765 18.255416709419464 22.91275233262069 27.410963443414076 20 28.487358348065527 20.560434514207664 23.658215349628176 27.29399178809863 21 30.354060450493943 18.12138879030047 26.51007648405475 25.01447427515084 22 30.912611038127647 17.569162813307923 24.239944962430805 27.27828118613363 23 31.129363518771143 19.35771560446289 23.551840781291265 25.96108009547471 24 31.17753821259102 18.86860116769806 22.441804330676213 27.51205628903471 25 28.540377424504165 17.36828914235925 24.193250496633322 29.89808293650326 26 29.842237970203684 17.04243712815579 23.909046716332803 29.206278185307728 27 30.07779607504083 16.29219701162147 22.81795045609526 30.812056457242438 28 32.07475824344032 19.800438349343903 21.201070473992562 26.923732933223217 29 33.32134572912164 18.78940896849974 21.53354987275085 26.355695429627772 30 31.40899204882061 19.343249739698535 22.302932028938457 26.944826182542393 31 34.58246636265923 19.66173425533597 19.80740214935837 25.948397232646432 32 35.59268834640027 19.032570062724663 20.559963532564176 24.81477805831089 33 35.15857783728594 19.511995734251972 20.77156885667524 24.557857571786855 34 29.37213100690829 23.18252388970283 23.900737254479793 23.544607848909088 35 30.327584553820586 24.755232521955314 23.12035431276209 21.79682861146201 36 31.909679177396917 23.98194794643593 20.401612775713495 23.706760100453657 37 30.37400988725036 24.501911680849382 20.750441965810097 24.37363646609016 38 32.524343863697915 24.03294853011675 19.897191435535227 23.545516170650103 39 31.655483656095935 22.66905297366035 19.788899299078388 25.886564071165324 40 29.886207470778114 22.997529028448973 20.86401582498322 26.252247675789693 41 27.197137777269415 23.128630133069137 22.071343626525014 27.60288846313643 42 27.55084499153074 20.511486064830624 23.128058226787754 28.80961071685088 43 27.00847598750553 19.739580792695747 25.635329005909135 27.616614213889584 44 27.14421962546867 19.85658608955716 24.168591243442002 28.83060304153217 45 27.74805173396938 20.111790857237054 24.090374649076622 28.04978275971694 46 27.30115743738888 21.393903815455936 23.007823341513838 28.29711540564135 47 28.13876464879067 21.92463284457774 23.684960378669242 26.25164212796235 48 30.434261896071174 21.923253541193233 23.728425256054216 23.91405930668138 49 28.913193036872816 21.52624965727675 23.194567563157797 26.365989742692637 50 25.754016380068727 23.32277549482509 23.17529095732065 27.74791716778553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 37.0 6 63.0 7 141.0 8 219.0 9 2585.0 10 4951.0 11 6495.5 12 8040.0 13 6644.5 14 5249.0 15 4531.5 16 3814.0 17 4237.0 18 4660.0 19 4926.0 20 5192.0 21 4916.0 22 4640.0 23 5837.0 24 7034.0 25 8780.0 26 10526.0 27 12388.5 28 14251.0 29 14040.0 30 13829.0 31 15531.0 32 17233.0 33 21925.5 34 26618.0 35 31138.0 36 35658.0 37 37467.5 38 39277.0 39 42011.5 40 44746.0 41 44426.5 42 44107.0 43 49644.0 44 55181.0 45 61563.0 46 67945.0 47 75267.5 48 82590.0 49 99997.0 50 117404.0 51 136852.0 52 156300.0 53 183243.0 54 210186.0 55 261836.5 56 313487.0 57 329979.0 58 346471.0 59 332575.5 60 318680.0 61 318153.0 62 317626.0 63 271049.5 64 224473.0 65 188297.0 66 152121.0 67 129222.0 68 106323.0 69 89903.5 70 73484.0 71 63889.5 72 54295.0 73 54172.5 74 54050.0 75 37563.5 76 21077.0 77 13970.5 78 6864.0 79 4781.0 80 2698.0 81 1660.5 82 623.0 83 475.5 84 328.0 85 233.0 86 138.0 87 88.5 88 39.0 89 23.0 90 7.0 91 7.0 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2972515.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.06181923895178 #Duplication Level Percentage of deduplicated Percentage of total 1 67.97144062976295 5.479734677682918 2 10.594878818454816 1.708279957859635 3 4.574991537943141 1.1064826439589484 4 2.6470247386915964 0.8535933985746089 5 1.5745225056035241 0.6346757913918526 6 0.9995513796920626 0.483492152587336 7 0.6796892894766686 0.3835672533288731 8 0.47449125698619227 0.3060210195428559 9 0.39664973873104964 0.2877946645344456 >10 4.297985903510409 8.846034868478881 >50 2.893074257661414 16.934843730567085 >100 2.6843317898358694 38.70290710476493 >500 0.1347854892842269 7.420177801956538 >1k 0.06432943806747193 8.995806645137444 >5k 0.010065150173822139 5.431952301266827 >10k+ 0.002188076124743943 2.4246359883668296 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 17640 0.5934368707979606 No Hit ATGCTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 15817 0.532108332506312 No Hit ATGCTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 12830 0.43162103471302926 No Hit ATGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 12349 0.415439451104536 No Hit ATGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 10090 0.3394431987727564 No Hit ATGCTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGA 9373 0.3153222103168529 No Hit ATGCTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 8903 0.2995106837139594 No Hit ATGCTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 8875 0.2985687204269785 No Hit ATGCTTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 7832 0.26348058798694035 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 7327 0.2464916072753207 No Hit ATGCTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 7281 0.244944096160995 No Hit ATGCTTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 7211 0.24258918794354276 No Hit ATGCTTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 7082 0.23824942851423794 No Hit ATGCTTGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 7045 0.23700469131358462 No Hit ATGCTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 6715 0.22590298114559554 No Hit ATGCTTGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 6441 0.2166851975515683 No Hit ATGCTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 6280 0.21126890865142814 No Hit ATGCTTGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 6234 0.2097213975371024 No Hit ATGCTTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 6116 0.20575169511339725 No Hit ATGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 6049 0.2034977115338358 No Hit ATGCTTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 6011 0.20221933278721888 No Hit ATGCTTGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 5898 0.19841783809333174 No Hit ATGCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 5840 0.19646662842744278 No Hit ATGCTTGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 5832 0.1961974960597339 No Hit ATGCTTGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 5727 0.1926651337335556 No Hit ATGCTTGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 5507 0.18526399362156287 No Hit ATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5353 0.18008319554316798 No Hit ATGCTTGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 5036 0.16941882547270576 No Hit ATGCTTGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4925 0.16568461387074582 No Hit ATGCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3793 0.127602383839947 No Hit ATGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 3668 0.1233971905944966 No Hit ATGCTTGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 3654 0.12292620895100613 No Hit ATGCTTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 3560 0.11976390363042744 No Hit ATGCTTGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGC 3542 0.11915835580308257 No Hit ATGCTTGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAA 3472 0.11680344758563034 No Hit ATGCTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3348 0.11263189588614354 No Hit ATGCTTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 3320 0.11168993259916267 No Hit ATGCTTGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGAA 3215 0.10815757027298432 No Hit ATGCTTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 2987 0.1004872977932828 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.0092463789080963E-4 0.0 0.0 0.0 0.0 8 5.382647354176514E-4 0.0 0.0 0.0 0.0 9 0.0010428879248716996 0.0 0.0 0.0 0.0 10 0.014331298580494967 0.0 0.0 0.0 0.0 11 0.02997461745357046 0.0 0.0 0.0 0.0 12 0.03925968413952495 0.0 0.0 0.0 0.0 13 0.04780463681428016 0.0 0.0 0.0 0.0 14 0.06348159723331925 0.0 0.0 0.0 0.0 15 0.07788017890574143 0.0 0.0 0.0 0.0 16 0.09439817797387061 0.0 0.0 0.0 0.0 17 0.10314497992440745 0.0 0.0 0.0 0.0 18 0.11269917897807076 0.0 0.0 0.0 0.0 19 0.12649221282314807 0.0 0.0 0.0 0.0 20 0.13581092105506617 0.0 0.0 0.0 0.0 21 0.14600430948203794 0.0 0.0 0.0 0.0 22 0.15636590563882774 0.0 0.0 0.0 0.0 23 0.1666938602496539 0.0 0.0 0.0 0.0 24 0.1778964950555338 0.0 0.0 0.0 0.0 25 0.18765254338497872 0.0 0.0 0.0 0.0 26 0.2002344815753663 0.0 0.0 0.0 0.0 27 0.21227815503033626 0.0 0.0 0.0 0.0 28 0.23703833285954823 0.0 0.0 0.0 0.0 29 0.2484764584871733 0.0 0.0 0.0 0.0 30 0.2609911135856337 0.0 0.0 0.0 0.0 31 0.2742458826952934 0.0 0.0 0.0 0.0 32 0.2900910508441505 0.0 0.0 0.0 0.0 33 0.3052970296196991 0.0 0.0 0.0 0.0 34 0.3228915581586636 0.0 0.0 0.0 0.0 35 0.36622186935978457 0.0 0.0 0.0 0.0 36 0.387045986311255 0.0 0.0 0.0 0.0 37 0.40312664528185727 0.0 0.0 0.0 0.0 38 0.4201156259934769 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTA 35 1.4471152E-7 44.0 18 CGTATTA 30 2.5290774E-6 44.0 34 CGTATAG 35 1.4471152E-7 44.0 40 ACGTTAA 30 2.5290774E-6 44.0 10 TACGGGT 40 8.3200575E-9 44.0 24 ACTTACG 35 1.4471152E-7 44.0 19 TTATCGA 20 7.8585E-4 44.0 38 TCGATAG 40 8.3200575E-9 44.0 17 ATATACG 20 7.8585E-4 44.0 29 GTCAATC 20 7.8585E-4 44.0 39 TTACGTA 50 2.7284841E-11 44.0 44 TATAGGG 35 1.4471152E-7 44.0 43 ACGTATC 20 7.8585E-4 44.0 43 ATAACGT 20 7.8585E-4 44.0 11 ACGTAAT 25 4.4445507E-5 44.0 21 ACGTAAC 50 2.7284841E-11 44.0 29 CGATCTA 50 2.7284841E-11 44.0 44 TATAACG 45 4.802132E-10 44.0 35 CGATAAG 20 7.8585E-4 44.0 28 TTGGGAT 14980 0.0 41.532707 5 >>END_MODULE