##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527228_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1577046 Sequences flagged as poor quality 0 Sequence length 50 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28074894454569 31.0 31.0 31.0 31.0 33.0 2 31.41836382705387 31.0 31.0 33.0 30.0 34.0 3 32.33198207281208 33.0 31.0 34.0 31.0 34.0 4 36.30309769023859 37.0 35.0 37.0 35.0 37.0 5 36.30438680926238 37.0 35.0 37.0 35.0 37.0 6 33.16757976622115 35.0 32.0 35.0 30.0 35.0 7 35.370061494718605 35.0 35.0 37.0 35.0 37.0 8 36.33406951984914 37.0 35.0 37.0 35.0 37.0 9 38.657995391383636 39.0 39.0 39.0 37.0 39.0 10 37.95275851179991 39.0 38.0 39.0 35.0 39.0 11 37.056195570706244 39.0 37.0 39.0 34.0 39.0 12 36.32559608280291 37.0 35.0 39.0 32.0 39.0 13 36.12748772071328 37.0 35.0 39.0 32.0 39.0 14 36.89703027051843 38.0 36.0 40.0 32.0 40.0 15 36.85707772633138 38.0 36.0 40.0 32.0 40.0 16 36.64638063823122 38.0 35.0 40.0 32.0 40.0 17 36.475452840310304 38.0 35.0 40.0 31.0 40.0 18 36.35791156377176 38.0 35.0 40.0 31.0 40.0 19 36.302180786102625 38.0 35.0 40.0 30.0 40.0 20 35.958424167716096 38.0 34.0 40.0 30.0 40.0 21 36.17715272731423 38.0 35.0 40.0 30.0 40.0 22 35.99683078362965 38.0 34.0 40.0 30.0 40.0 23 35.91158976973405 38.0 34.0 39.0 30.0 40.0 24 35.96345953130093 38.0 34.0 39.0 30.0 40.0 25 35.83025923149991 38.0 34.0 39.0 30.0 40.0 26 35.549489361756095 38.0 34.0 39.0 30.0 40.0 27 35.29546189521422 38.0 34.0 39.0 29.0 40.0 28 34.968529136119045 37.0 33.0 39.0 27.0 40.0 29 35.64909203663051 38.0 34.0 40.0 30.0 40.0 30 35.97350426049716 38.0 34.0 40.0 30.0 40.0 31 35.96950247488025 38.0 34.0 40.0 30.0 40.0 32 35.36044668322928 38.0 34.0 40.0 28.0 40.0 33 35.47264696147101 38.0 34.0 40.0 28.0 40.0 34 35.215119279970274 38.0 33.0 40.0 27.0 40.0 35 35.239994267763905 38.0 33.0 40.0 27.0 40.0 36 35.14204785402582 38.0 33.0 40.0 27.0 40.0 37 34.98916835653494 37.0 33.0 40.0 27.0 40.0 38 34.81052106279715 37.0 33.0 40.0 26.0 40.0 39 34.692589182560305 37.0 33.0 40.0 26.0 40.0 40 34.46461612406994 36.0 33.0 40.0 26.0 40.0 41 34.2412339272285 36.0 33.0 39.0 26.0 40.0 42 34.144028138684604 36.0 33.0 39.0 26.0 40.0 43 34.015283003793165 35.0 33.0 39.0 25.0 40.0 44 33.89150855460145 35.0 32.0 39.0 25.0 40.0 45 33.74028595234381 35.0 32.0 39.0 24.0 40.0 46 33.39323710278584 35.0 32.0 39.0 23.0 40.0 47 33.255357167768096 35.0 32.0 39.0 23.0 40.0 48 32.99043718445753 35.0 31.0 38.0 23.0 40.0 49 32.64967794217797 35.0 31.0 38.0 22.0 40.0 50 32.08963023272625 34.0 30.0 37.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 7.0 15 28.0 16 99.0 17 205.0 18 383.0 19 783.0 20 1427.0 21 2261.0 22 3548.0 23 5393.0 24 8094.0 25 11304.0 26 15033.0 27 20928.0 28 27231.0 29 35667.0 30 46996.0 31 61697.0 32 83272.0 33 114175.0 34 153121.0 35 172145.0 36 242841.0 37 299944.0 38 263324.0 39 7137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.33946124589897 0.6221124811831741 0.0314512068766542 0.0069750660411934725 8 99.62461462760123 0.321106676660034 0.028597770768893232 0.025680924969848692 9 98.66338711743347 0.9198843914508518 0.15776331191353962 0.2589651792021285 10 66.01779529576183 22.01400593261072 4.223148849177513 7.745049922449948 11 33.37385212606354 25.54136023933354 19.787945310409462 21.29684232419346 12 29.23567226320602 16.962092418356853 27.966844340621645 25.835390977815486 13 22.214126918301684 15.549768364397742 32.25847565638542 29.977629060915156 14 23.45315228598278 16.310050562887827 33.165868338653404 27.070928812475987 15 24.92609600480899 16.592857786012583 29.775605784485677 28.705440424692746 16 30.50209061752162 17.01878068236437 25.78941895163489 26.689709748479117 17 31.477078030697896 17.03850109635356 23.935065939737964 27.549354933210573 18 29.63096827866784 19.166910793978108 23.784024055100485 27.418096872253567 19 30.000456549777244 18.96685321797842 22.801617708044027 28.231072524200307 20 30.394928239252373 19.225184300267717 22.777331796282414 27.602555664197492 21 31.81162756191005 17.93169000777403 25.47826759650638 24.77841483380954 22 32.65763966301554 16.808640965450596 24.321865056567784 26.211854314966082 23 31.754305200989698 18.806046240883273 22.624133982141295 26.815514575985734 24 32.30818885435174 18.34562847247322 22.473662784725366 26.87251988844967 25 30.120110637229352 17.913428016684357 23.15867767966185 28.80778366642444 26 28.086561837765032 18.523556066214937 23.84350234552448 29.54637975049555 27 30.000710188542378 17.090116585058393 23.707044689882224 29.20212853651701 28 30.632460942800655 19.30520733066759 21.86175926383885 28.200572462692907 29 31.22198084266407 19.409769911594207 21.732340083929067 27.635909161812656 30 29.937871184480354 18.51975148473792 24.121046564272696 27.421330766509026 31 33.39534801140867 19.256698916835653 19.689660288919917 27.65829278283576 32 34.69220301754039 20.202200823565068 20.30891933399533 24.79667682489921 33 34.98509238157923 18.666861968515818 21.237871311299735 25.110174338605212 34 30.905820121924155 20.853925630577674 25.380997130077372 22.859257117420796 35 29.7809321985535 22.786843249974954 24.228906449146063 23.203318102325486 36 31.871993588012014 22.76211347037436 20.26053773954596 25.105355202067663 37 31.488111316981243 23.032175345551114 20.246270559007158 25.233442778460493 38 32.67203366293691 22.228774556988192 20.244495087651217 24.854696692423683 39 32.56182761948605 22.250460671407176 19.50482103882829 25.682890670278486 40 30.34305911178241 21.114793100518312 21.59448741507857 26.947660372620707 41 28.93523714590443 21.85155030354219 22.23245231908264 26.980760231470736 42 26.949499253667934 19.78775508133561 24.11502264360076 29.1477230213957 43 26.61970544930205 18.115134244657416 25.910404642603957 29.354755663436578 44 26.940621896888235 18.94998624009699 24.44411894136252 29.665272921652253 45 29.08830814066299 19.045608054552627 24.761167397780408 27.10491640700398 46 28.87721727837996 20.846696925771347 23.07764009420144 27.198445701647255 47 26.878416989739044 20.536813764468505 25.183539351420315 27.401229894372136 48 30.052008628790787 19.510844959500233 25.22139493711661 25.21575147459237 49 28.53791202032154 20.049129828806517 24.701879336430263 26.711078814441684 50 26.12403189253833 21.093487444247028 24.7553971158736 28.027083547341043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 1.0 10 1.0 11 3.5 12 6.0 13 403.5 14 801.0 15 965.0 16 1129.0 17 1335.5 18 1542.0 19 1453.0 20 1364.0 21 1376.5 22 1389.0 23 1954.5 24 2520.0 25 2894.0 26 3268.0 27 3281.5 28 3295.0 29 4427.0 30 5559.0 31 5977.5 32 6396.0 33 7714.5 34 9033.0 35 12480.0 36 15927.0 37 15937.5 38 15948.0 39 19097.0 40 22246.0 41 21938.0 42 21630.0 43 24443.0 44 27256.0 45 31427.0 46 35598.0 47 35181.5 48 34765.0 49 37480.0 50 40195.0 51 45045.0 52 49895.0 53 55022.5 54 60150.0 55 66602.0 56 73054.0 57 81759.0 58 90464.0 59 114171.5 60 137879.0 61 145912.5 62 153946.0 63 157647.5 64 161349.0 65 166860.0 66 172371.0 67 153180.5 68 133990.0 69 113964.0 70 93938.0 71 78719.0 72 63500.0 73 56956.0 74 50412.0 75 43267.0 76 36122.0 77 34141.5 78 32161.0 79 22407.0 80 12653.0 81 7757.0 82 2861.0 83 1978.5 84 1096.0 85 918.0 86 740.0 87 576.0 88 412.0 89 260.0 90 108.0 91 86.0 92 64.0 93 36.5 94 9.0 95 6.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1577046.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.261563364382972 #Duplication Level Percentage of deduplicated Percentage of total 1 68.26927686099728 5.640109566277333 2 10.83628926422309 1.7904938078232402 3 4.710256450414035 1.1674224638276756 4 2.555927871732069 0.8446384026842801 5 1.46552942750627 0.6053782113855478 6 0.88191653791895 0.4371605616068799 7 0.6147145740001583 0.3554952382878396 8 0.4351748887069857 0.28761799341128563 9 0.3581341083260697 0.26628728659943585 >10 4.003745428245852 8.603808725921365 >50 2.7665696799276813 16.781062455644786 >100 2.9031511911066596 43.192624166266974 >500 0.13022888275204927 7.305715011906029 >1k 0.06432036282265849 9.725952060623161 >5k 0.003970392766830771 2.307661781027698 >10k+ 7.940785533661543E-4 0.688572266706468 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10496 0.6655481197124243 No Hit GTCGGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 9494 0.6020116090462801 No Hit GTCGGTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 8395 0.5323243583256291 No Hit GTCGGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5960 0.377921760050119 No Hit GTCGGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 5864 0.3718344296868956 No Hit GTCGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 5463 0.3464071434821812 No Hit GTCGGTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 4785 0.303415372791916 No Hit GTCGGTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 3911 0.24799530261006972 No Hit GTCGGTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 3754 0.23803998107854812 No Hit GTCGGTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 3711 0.23531336435335432 No Hit GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3692 0.23410858021896633 No Hit GTCGGTGGGCTGTAGGTGTCTGTGTGGGTGTGGGTGTGCTATAGGTATCT 3675 0.2330306154671455 No Hit GTCGGTGGGTCATTCAGATTGCCATCATCTCTATCTTCAAGTCCTATCCA 3469 0.21996821906272868 No Hit GTCGGTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3146 0.1994868887781333 No Hit GTCGGTGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 2999 0.19016566415944747 No Hit GTCGGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2998 0.1901022544681639 No Hit GTCGGTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 2919 0.1850928888567613 No Hit GTCGGTGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCT 2811 0.178244642198135 No Hit GTCGGTGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 2734 0.17336209596929955 No Hit GTCGGTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 2719 0.1724109506000459 No Hit GTCGGTGGGGGAGTGGCCTTGTTCTCGATACTTCGTTGTGGTTGTGAACT 2482 0.15738285376583816 No Hit GTCGGTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 2308 0.14634956748249575 No Hit GTCGGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2298 0.14571547056966 No Hit GTCGGTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2263 0.1434961313747348 No Hit GTCGGTGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAAC 2250 0.1426718053880483 No Hit GTCGGTGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 2243 0.14222793754906327 No Hit GTCGGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 2110 0.13379444860834752 No Hit GTCGGTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 2089 0.1324628450913924 No Hit GTCGGTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 1974 0.12517073059378103 No Hit GTCGGTGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 1968 0.12479027244607958 No Hit GTCGGTGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAA 1947 0.12345866892912445 No Hit GTCGGTGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 1946 0.12339525923784087 No Hit GTCGGTGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 1888 0.1197174971433934 No Hit GTCGGTGGGATCTTACAGTTACCTCATTTTTCCCATGTATGTATTTGAGA 1854 0.1175615676397518 No Hit GTCGGTGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCC 1819 0.1153422284448266 No Hit GTCGGTGGGGTTCCCCTGTTTTGAGTATTTCTGTCCCTGGAATAACCTTT 1814 0.11502517998840871 No Hit GTCGGTGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTG 1762 0.1117278760416627 No Hit GTCGGTGGGCGATGGCAAGAACGTCAATGCGGGTGGCCACAAGCTTGGCC 1718 0.10893784962518532 No Hit GTCGGTGGGGACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTG 1714 0.108684210860051 No Hit GTCGGTGGGGCTCTTTGTCTCGGGCCTGAGTTCGTAGGCGCAGCCGGCCT 1703 0.10798670425593165 No Hit GTCGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1667 0.1057039553697229 No Hit GTCGGTGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 1653 0.10481621969175281 No Hit GTCGGTGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAACA 1636 0.103738254939932 No Hit GTCGGTGGGGACTGTGGCCGCGGCGCGGGAAGGACAGTGAGCGGCCGCGA 1611 0.10215301265784257 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 6.340969128357701E-5 0.0 0.0 0.0 0.0 8 3.170484564178851E-4 0.0 0.0 0.0 0.0 9 5.072775302686161E-4 0.0 0.0 0.0 0.0 10 0.002409568268775927 0.0 0.0 0.0 0.0 11 0.005453233450387623 0.0 0.0 0.0 0.0 12 0.008433488940715743 0.0 0.0 0.0 0.0 13 0.010779647518208093 0.0 0.0 0.0 0.0 14 0.014076951464954099 0.0 0.0 0.0 0.0 15 0.018959497693789528 0.0 0.0 0.0 0.0 16 0.02422250207032642 0.0 0.0 0.0 0.0 17 0.027329576943221693 0.0 0.0 0.0 0.0 18 0.0306268808899677 0.0 0.0 0.0 0.0 19 0.03512896897110167 0.0 0.0 0.0 0.0 20 0.03810922446142979 0.0 0.0 0.0 0.0 21 0.04153334779074295 0.0 0.0 0.0 0.0 22 0.044069735442086026 0.0 0.0 0.0 0.0 23 0.0480011363016678 0.0 0.0 0.0 0.0 24 0.051361849939697383 0.0 0.0 0.0 0.0 25 0.05554688956441347 0.0 0.0 0.0 0.0 26 0.05985874857169671 0.0 0.0 0.0 0.0 27 0.06309264282715914 0.0 0.0 0.0 0.0 28 0.06778495998214383 0.0 0.0 0.0 0.0 29 0.07120908331145699 0.0 0.0 0.0 0.0 30 0.07653549737927746 0.0 0.0 0.0 0.0 31 0.0824960083599337 0.0 0.0 0.0 0.0 32 0.09130995544835091 0.0 0.0 0.0 0.0 33 0.09714364704643999 0.0 0.0 0.0 0.0 34 0.10335779679223053 0.0 0.0 0.0 0.0 35 0.11141082758524481 0.0 0.0 0.0 0.0 36 0.11768838702231894 0.0 0.0 0.0 0.0 37 0.12402935615067665 0.0 0.0 0.0 0.0 38 0.1291021314533628 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATAAT 20 7.8573753E-4 44.0 34 CGTATGA 30 2.5283189E-6 44.0 18 GATAACG 30 2.5283189E-6 44.0 19 CGAAATT 45 4.802132E-10 44.0 21 TTTACGC 20 7.8573753E-4 44.0 34 CAACGAA 30 2.5283189E-6 44.0 20 TAGCGTA 20 7.8573753E-4 44.0 24 CTATACT 30 2.5283189E-6 44.0 12 CTATACG 30 2.5283189E-6 44.0 20 ATTACGT 35 1.4465513E-7 44.0 31 CGACCTA 20 7.8573753E-4 44.0 44 GCACGTA 20 7.8573753E-4 44.0 29 CAACCCG 35 1.4465513E-7 44.0 18 TGACGTA 30 2.5283189E-6 44.0 40 TAACGGG 20 7.8573753E-4 44.0 14 CGCGAAT 35 1.4465513E-7 44.0 42 ATCACGA 25 4.443596E-5 44.0 21 TTATCGA 25 4.443596E-5 44.0 42 TAGTTAG 20 7.8573753E-4 44.0 30 CGTTACG 30 2.5283189E-6 44.0 44 >>END_MODULE