##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527219_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 595556 Sequences flagged as poor quality 0 Sequence length 50 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35791596424182 33.0 31.0 34.0 31.0 34.0 2 32.68062281296805 34.0 31.0 34.0 31.0 34.0 3 32.66956423913116 34.0 31.0 34.0 31.0 34.0 4 36.36456353390781 37.0 37.0 37.0 35.0 37.0 5 36.432313669915175 37.0 37.0 37.0 35.0 37.0 6 36.41437413106408 37.0 37.0 37.0 35.0 37.0 7 36.47283378893001 37.0 37.0 37.0 35.0 37.0 8 36.613737415121335 37.0 37.0 37.0 35.0 37.0 9 38.7083330534828 39.0 39.0 39.0 39.0 39.0 10 38.18886888890381 39.0 39.0 39.0 37.0 39.0 11 37.94492373513154 39.0 38.0 39.0 35.0 39.0 12 37.365487040681316 39.0 37.0 39.0 35.0 39.0 13 37.20758585254787 39.0 37.0 39.0 34.0 39.0 14 38.04549530186918 40.0 38.0 40.0 34.0 40.0 15 38.046420487745905 40.0 38.0 40.0 34.0 40.0 16 37.90193029706694 40.0 38.0 40.0 34.0 40.0 17 38.0180016656704 40.0 38.0 40.0 34.0 40.0 18 37.972415692227095 40.0 38.0 40.0 34.0 40.0 19 37.76640483850385 40.0 37.0 40.0 34.0 40.0 20 37.56961394058661 40.0 37.0 40.0 33.0 40.0 21 37.731738073329794 40.0 37.0 40.0 33.0 40.0 22 37.528225725204685 40.0 37.0 40.0 33.0 40.0 23 37.590374372854946 40.0 37.0 40.0 33.0 40.0 24 37.63282546057801 40.0 37.0 40.0 33.0 40.0 25 37.50305596786868 40.0 36.0 40.0 33.0 40.0 26 37.38250811006858 40.0 36.0 40.0 33.0 40.0 27 37.186115159615554 39.0 35.0 40.0 33.0 40.0 28 36.97537259300553 39.0 35.0 40.0 32.0 40.0 29 37.16104614847303 39.0 35.0 40.0 33.0 40.0 30 37.12745736756913 39.0 35.0 40.0 33.0 40.0 31 37.01387946725413 39.0 35.0 40.0 33.0 40.0 32 36.14716164390922 39.0 35.0 40.0 30.0 40.0 33 36.35481801879252 39.0 35.0 40.0 31.0 40.0 34 36.3119941701536 38.0 35.0 40.0 31.0 40.0 35 36.306389323590054 38.0 35.0 40.0 31.0 40.0 36 35.98283620683865 38.0 35.0 40.0 30.0 40.0 37 35.77416061629805 38.0 35.0 40.0 30.0 40.0 38 35.533654265929655 37.0 35.0 40.0 29.0 40.0 39 35.50361678834568 37.0 35.0 40.0 30.0 40.0 40 35.36874785914339 37.0 35.0 40.0 29.0 40.0 41 35.20689742022581 37.0 35.0 40.0 29.0 40.0 42 35.06249454291452 36.0 34.0 40.0 28.0 40.0 43 34.940433813109095 36.0 34.0 40.0 28.0 40.0 44 34.735962697042766 35.0 34.0 40.0 28.0 40.0 45 34.596684442772805 35.0 34.0 40.0 27.0 40.0 46 34.329572701811415 35.0 34.0 39.0 26.0 40.0 47 34.208420366850476 35.0 34.0 39.0 26.0 40.0 48 34.09292828885948 35.0 34.0 39.0 26.0 40.0 49 33.76783543445117 35.0 33.0 39.0 26.0 40.0 50 33.36790830753112 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 2.0 15 7.0 16 13.0 17 37.0 18 88.0 19 180.0 20 334.0 21 551.0 22 908.0 23 1356.0 24 1964.0 25 2803.0 26 4156.0 27 5552.0 28 7197.0 29 9004.0 30 11717.0 31 13977.0 32 16902.0 33 22760.0 34 41335.0 35 56245.0 36 75350.0 37 107725.0 38 147731.0 39 67658.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 98.52507572755542 0.5673689795753883 0.1894028437292211 0.7181524491399633 8 99.10772454647422 0.38317135584227174 0.17563419728791246 0.3334699003955967 9 97.13931183633446 1.5501480969044052 0.6986748517351853 0.6118652150259589 10 60.71099946940338 27.564998085822324 5.445163846892651 6.278838597881643 11 37.47103546937652 24.15759391224335 19.143959594060004 19.227411024320133 12 30.629361470625767 13.98944851533693 28.03229251321454 27.348897500822762 13 23.706250965484355 16.565528682441283 28.763206146861087 30.965014205213283 14 23.7415121331999 19.070246962502267 29.077198449851906 28.11104245444593 15 25.813021781327027 19.214481929491097 28.567590621201028 26.404905667980845 16 30.246693845750862 17.104017086554414 28.713336781091954 23.93595228660277 17 31.867700098731273 18.258400553432423 21.955282122923787 27.918617224912516 18 30.68225322219909 18.87899710522604 23.142576013002973 27.2961736595719 19 30.64195474480989 17.9123373788527 23.734291989334334 27.71141588700307 20 29.731712886781423 21.226383413146706 24.355224361772866 24.686679338299 21 30.09708574844347 17.583904788130756 26.823506101861117 25.49550336156465 22 29.416545211533425 15.912189617768943 25.668115173048378 29.00314999764926 23 27.59287119934985 22.271457260106523 23.817743419594464 26.317928120949162 24 28.259475179496135 21.089200679700983 23.50593395079556 27.145390190007323 25 27.992665677115163 20.778230762514358 24.221231924453786 27.007871635916693 26 30.539697358434807 19.532504080220836 21.969722410654917 27.958076150689436 27 27.015763421072077 17.32767363606445 23.883900086641727 31.77266285622175 28 27.682031580573447 20.26274607257756 23.5814935959003 28.473728750948695 29 31.00984626130876 19.95177615539093 21.65656965927637 27.38180792402394 30 26.472909348575115 21.295730376320616 23.133173034945496 29.098187240158772 31 31.612140587954784 19.942205267010994 22.08776336734077 26.35789077769345 32 30.587551800334477 21.03379027329084 22.74781884491131 25.630839081463375 33 34.19376179570015 18.72485542921237 21.296737838255346 25.784644936832134 34 30.2935408257158 22.270449798171793 22.63531892886647 24.800690447245934 35 30.708783053146977 23.28462814579989 24.884645608473427 21.121943192579707 36 32.266487114561855 22.114964839578477 21.74707332307961 23.871474722780057 37 30.250052052199962 22.905990368663904 21.32242811759096 25.521529461545178 38 34.1969520918268 21.650860708312905 21.868976217181928 22.28321098267837 39 30.174660317417672 20.65699950970186 20.879648597277168 28.288691575603302 40 27.77169569276441 22.587296576644345 23.87735158406598 25.763656146525264 41 26.803524773488974 22.71524424235504 22.332072886512773 28.149158097643213 42 27.106434995197766 19.90056350704216 23.919664985324637 29.07333651243544 43 25.682051729812144 20.984424638489077 25.619253269213978 27.714270362484804 44 25.947685859935927 20.05991040305194 25.635036839524744 28.357366897487392 45 26.618823418788494 19.17854912048573 25.103264848309813 29.099362612415963 46 28.874698600971193 18.70974350019142 23.750411380290014 28.665146518547374 47 27.98628508486188 21.051924588115977 24.071959647791306 26.889830679230837 48 30.728260650551753 20.284574414496706 24.511884692623365 24.475280242328175 49 29.027664904727686 22.47647576382406 23.67686665905473 24.818992672393527 50 25.89764858384434 22.214367750471826 25.35513033199229 26.53285333369154 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 3.5 10 4.0 11 20.0 12 36.0 13 131.5 14 227.0 15 316.5 16 406.0 17 502.0 18 598.0 19 674.5 20 751.0 21 715.0 22 679.0 23 663.0 24 647.0 25 807.0 26 967.0 27 1152.5 28 1338.0 29 2026.5 30 2715.0 31 3265.0 32 3815.0 33 4291.0 34 4767.0 35 5066.0 36 5365.0 37 5751.5 38 6138.0 39 6351.5 40 6565.0 41 9050.0 42 11535.0 43 11232.5 44 10930.0 45 11588.0 46 12246.0 47 15839.0 48 19432.0 49 18138.5 50 16845.0 51 19977.5 52 23110.0 53 23810.5 54 24511.0 55 27598.5 56 30686.0 57 34450.5 58 38215.0 59 47414.5 60 56614.0 61 58915.0 62 61216.0 63 60086.5 64 58957.0 65 55823.0 66 52689.0 67 48007.5 68 43326.0 69 36076.5 70 28827.0 71 26347.5 72 23868.0 73 21344.0 74 18820.0 75 15335.0 76 11850.0 77 11203.5 78 10557.0 79 7440.5 80 4324.0 81 2754.0 82 1184.0 83 797.5 84 411.0 85 367.5 86 324.0 87 178.5 88 33.0 89 25.5 90 18.0 91 12.5 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 595556.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.480270537111538 #Duplication Level Percentage of deduplicated Percentage of total 1 70.4602634305165 8.793631497289928 2 11.941824639767514 2.9807440442208626 3 4.891896618994443 1.8315657973389572 4 2.5132186150389497 1.2546259293836348 5 1.380386669716254 0.861379954194064 6 0.9175669675891668 0.6870890394857914 7 0.49914566711962 0.4360631074155915 8 0.32693368493279695 0.3264176668524874 9 0.2825352832752566 0.3173505094399183 >10 2.7890268677600334 8.943407504919772 >50 1.933348581269256 17.484837697882316 >100 1.9642929218184508 43.81384790011351 >500 0.06592489943089322 5.399156418539986 >1k 0.03363515277086389 6.869882932923184 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACACCCGGGACCACATTTCTACACTTTTAATACGTCAGTGTCCATGTTAA 3111 0.5223690131574529 No Hit ACACCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2804 0.470820544163773 No Hit ACACCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTACACCCGGGA 2758 0.46309666933084376 No Hit ACACCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2676 0.4493280228895352 No Hit ACACCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 2473 0.41524222743117356 No Hit ACACCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 2359 0.3961004506713055 No Hit ACACCCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 2020 0.33917885135906617 No Hit ACACCCGGGGTCCTTTACTTTCCCTCCTGACAGATAGTCTAGAAGCCGAT 1997 0.33531691394260155 No Hit ACACCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1956 0.3284325907219472 No Hit ACACCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1521 0.25539160045402953 No Hit ACACCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1517 0.2547199591642096 No Hit ACACCCGGGGCTCGTCCGTGGTCGTTCCGCGCCGTCATGTCTGTCCTGAC 1263 0.21207073726064382 No Hit ACACCCGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGT 1262 0.21190282693818885 No Hit ACACCCGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAAC 1208 0.20283566952561974 No Hit ACACCCGGAGTGAATCTCTCTTCATCTCTAACCATGCCTACTAACCAGAG 1173 0.19695880823969533 No Hit ACACCCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1171 0.19662298759478536 No Hit ACACCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1144 0.19208940888850085 No Hit ACACCCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1123 0.18856329211694617 No Hit ACACCCCGTTTCCCGGCTTCTCAATGCCTCGTGATGGTATATGTTTAACA 1112 0.18671627856994136 No Hit ACACCCGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCC 1092 0.1833580721208417 No Hit ACACCCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1060 0.17798494180228222 No Hit ACACCCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1039 0.17445882503072757 No Hit ACACCCGGGGGCCCCAGTCACTGAGCCGCCGCCGAGGACTCAGCTGCCTC 1032 0.1732834527735427 No Hit ACACCCGGAGGCCCAGTGCAGTTCTCTGGAGAAAGCTACCTTTTCCCAAG 1026 0.17227599083881281 No Hit ACACCCGGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1017 0.17076479793671798 No Hit ACACCCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 1000 0.16791032245498325 No Hit ACACCCGGGATTGAAAAAGGGTCTTTGTTTAGCCCAGGCTGGCCTCATAC 941 0.15800361343013922 No Hit ACACCCGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 889 0.1492722766624801 No Hit ACACCCGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGA 872 0.14641780118074538 No Hit ACACCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTACACCCGGGT 867 0.14557824956847049 No Hit ACACCCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 858 0.14406705666637562 No Hit ACACCCGGGCAAATGTAAGAAGTCCCTCACATCCGATTAGCCCAACTCTG 854 0.14339541537655567 No Hit ACACCCGGGATGGGATTCATTGGCTTCTTCGTGAAACTGATCCATATACC 814 0.13667900247835635 No Hit ACACCCGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAA 804 0.1349998992538065 No Hit ACACCCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 777 0.13046632054752197 No Hit ACACCCGGGGAACTAAAGTAACTCATATTTATGTAGTAGAATGCTTATGT 772 0.12962676893524705 No Hit ACACCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 740 0.1242536386166876 No Hit ACACCCGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAAC 725 0.12173498377986286 No Hit ACACCCGGGATTGTCAATTTTTCTGACTTTTTAAATCATCATCATTATTT 723 0.12139916313495289 No Hit ACACCCGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCTT 721 0.12106334249004291 No Hit ACACCCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 712 0.11955214958794806 No Hit ACACCCGGGATGGGATTCAGGTTGAGCCCCCAAACTGTGAATTCAGTTGC 701 0.11770513604094325 No Hit ACACCCGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 689 0.11569021217148347 No Hit ACACCCGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 681 0.11434692959184359 No Hit ACACCCGGGGGCCGAGCTCGTCGCTAGGTTTGTTGAAGGACATCGGCCGC 666 0.11182827475501883 No Hit ACACCCGGCAGTGTCATTCCTATGAGGCCTGTGCCAAGTTGGTGATGGAT 651 0.10930961991819409 No Hit ACACCCGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 650 0.1091417095957391 No Hit ACACCCGGGGCTTCTTCCTCGGCGCTGCCTACGAGGTGGCTGCCATCTGT 641 0.10763051669364426 No Hit ACACCCGGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCT 640 0.10746260637118928 No Hit ACACCCGGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 639 0.10729469604873429 No Hit ACACCCGGGATTCCTGATGGCTGTGGTGTCAAATATATCCCCAATCGTGG 633 0.1062872341140044 No Hit ACACCCGGGGACACCAAACTGGTTCTTGAACCTCTCGGCCCCGATTCTGA 613 0.10292902766490472 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.037309673649497E-4 0.0 0.0 0.0 0.0 8 8.395516122749162E-4 0.0 0.0 0.0 0.0 9 0.0011753722571848826 0.0 0.0 0.0 0.0 10 0.00470148902873953 0.0 0.0 0.0 0.0 11 0.010242529669753978 0.0 0.0 0.0 0.0 12 0.014272377408673575 0.0 0.0 0.0 0.0 13 0.03425370578081658 0.0 0.0 0.0 0.0 14 0.055578316732599456 0.0 0.0 0.0 0.0 15 0.06884323220654313 0.0 0.0 0.0 0.0 16 0.0891603812235961 0.0 0.0 0.0 0.0 17 0.09570888379934045 0.0 0.0 0.0 0.0 18 0.10057828315053496 0.0 0.0 0.0 0.0 19 0.1062872341140044 0.0 0.0 0.0 0.0 20 0.1121640953999288 0.0 0.0 0.0 0.0 21 0.13466407860889656 0.0 0.0 0.0 0.0 22 0.13701482312326632 0.0 0.0 0.0 0.0 23 0.14473869795619557 0.0 0.0 0.0 0.0 24 0.1563245102055894 0.0 0.0 0.0 0.0 25 0.16253719213642379 0.0 0.0 0.0 0.0 26 0.16807823277743822 0.0 0.0 0.0 0.0 27 0.17496255599809254 0.0 0.0 0.0 0.0 28 0.24195877465763085 0.0 0.0 0.0 0.0 29 0.2474998152986453 0.0 0.0 0.0 0.0 30 0.26580204044623845 0.0 0.0 0.0 0.0 31 0.2715109914097079 0.0 0.0 0.0 0.0 32 0.27906695592018216 0.0 0.0 0.0 0.0 33 0.28511172752856156 0.0 0.0 0.0 0.0 34 0.29434679526358565 0.0 0.0 0.0 0.0 35 0.3544586907024696 0.0 0.0 0.0 0.0 36 0.36436539972731363 0.0 0.0 0.0 0.0 37 0.36940270940096315 0.0 0.0 0.0 0.0 38 0.37628703262161745 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 20 7.853421E-4 44.000004 41 TATTTCG 20 7.853421E-4 44.000004 42 AGCGTAC 45 4.783942E-10 44.000004 10 TCGTTTA 20 7.853421E-4 44.000004 18 GATACTC 20 7.853421E-4 44.000004 10 AGGTACA 20 7.853421E-4 44.000004 42 ACTATAT 20 7.853421E-4 44.000004 25 TCGTTAA 20 7.853421E-4 44.000004 16 ATCTCCG 20 7.853421E-4 44.000004 25 CGACGGG 20 7.853421E-4 44.000004 36 CATGCGC 45 4.783942E-10 44.000004 14 TAGACGG 20 7.853421E-4 44.000004 24 GCGAAAT 20 7.853421E-4 44.000004 28 CATGATA 20 7.853421E-4 44.000004 40 CATGACG 20 7.853421E-4 44.000004 34 CATTGCG 20 7.853421E-4 44.000004 24 TTAGACG 20 7.853421E-4 44.000004 23 CGGTTAT 20 7.853421E-4 44.000004 14 TTATGCC 20 7.853421E-4 44.000004 23 CCAATAC 20 7.853421E-4 44.000004 38 >>END_MODULE