##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527204_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1028464 Sequences flagged as poor quality 0 Sequence length 50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.70955522021189 34.0 31.0 34.0 31.0 34.0 2 32.98894176169511 34.0 31.0 34.0 31.0 34.0 3 33.077373636802065 34.0 33.0 34.0 31.0 34.0 4 36.36983501610168 37.0 37.0 37.0 35.0 37.0 5 36.12332954775277 37.0 37.0 37.0 35.0 37.0 6 36.29072675368316 37.0 37.0 37.0 35.0 37.0 7 36.619726115838766 37.0 37.0 37.0 35.0 37.0 8 36.71805138536691 37.0 37.0 37.0 35.0 37.0 9 38.77046936013317 39.0 39.0 39.0 39.0 39.0 10 38.27971129762442 39.0 39.0 39.0 37.0 39.0 11 38.07652188117426 39.0 38.0 39.0 37.0 39.0 12 37.731815600740525 39.0 37.0 39.0 35.0 39.0 13 37.58324161079046 39.0 37.0 39.0 35.0 39.0 14 38.476180984458374 40.0 38.0 40.0 35.0 40.0 15 38.491364792545 40.0 38.0 40.0 35.0 40.0 16 38.33805850277696 40.0 38.0 40.0 35.0 40.0 17 38.44129303505033 40.0 38.0 40.0 35.0 40.0 18 38.408382792202744 40.0 38.0 40.0 35.0 40.0 19 38.39863816331928 40.0 38.0 40.0 35.0 40.0 20 38.13939622582803 40.0 38.0 40.0 34.0 40.0 21 38.35440521009972 40.0 38.0 40.0 35.0 40.0 22 38.16293132282705 40.0 38.0 40.0 34.0 40.0 23 38.21606590021624 40.0 38.0 40.0 34.0 40.0 24 38.26545703106769 40.0 38.0 40.0 35.0 40.0 25 38.22395727998258 40.0 38.0 40.0 35.0 40.0 26 38.10958769582601 40.0 38.0 40.0 34.0 40.0 27 37.98422112976244 40.0 38.0 40.0 34.0 40.0 28 37.89614512515752 40.0 38.0 40.0 34.0 40.0 29 38.079574977831015 40.0 38.0 40.0 34.0 40.0 30 38.10900041226528 40.0 38.0 40.0 35.0 40.0 31 38.07179152600383 40.0 38.0 40.0 34.0 40.0 32 37.35068315468504 40.0 37.0 40.0 33.0 40.0 33 37.5886856516125 40.0 37.0 40.0 33.0 40.0 34 37.651076751349585 40.0 37.0 40.0 33.0 40.0 35 37.62154825059506 40.0 37.0 40.0 33.0 40.0 36 37.43057024844817 40.0 37.0 40.0 33.0 40.0 37 37.363182376826025 40.0 36.0 40.0 33.0 40.0 38 37.18780628198945 40.0 36.0 40.0 33.0 40.0 39 37.15503216447051 40.0 35.0 40.0 33.0 40.0 40 37.030697233933324 40.0 35.0 40.0 32.0 40.0 41 36.90671914622194 40.0 35.0 40.0 32.0 40.0 42 36.809805690816596 40.0 35.0 40.0 32.0 40.0 43 36.67284513604754 39.0 35.0 40.0 31.0 40.0 44 36.5648860825464 39.0 35.0 40.0 31.0 40.0 45 36.49160398419391 39.0 35.0 40.0 31.0 40.0 46 36.17615978780006 39.0 35.0 40.0 31.0 40.0 47 36.14893180509964 39.0 35.0 40.0 30.0 40.0 48 36.061877712783335 38.0 35.0 40.0 30.0 40.0 49 35.75794874686912 38.0 35.0 40.0 30.0 40.0 50 35.30992625896482 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 3.0 15 7.0 16 21.0 17 41.0 18 108.0 19 192.0 20 414.0 21 585.0 22 964.0 23 1453.0 24 2077.0 25 2794.0 26 3632.0 27 5257.0 28 6956.0 29 9455.0 30 12452.0 31 16460.0 32 20829.0 33 27449.0 34 45363.0 35 62042.0 36 83682.0 37 160101.0 38 320411.0 39 245714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.3113030694317 0.6264682089018186 0.032086684609281414 0.030142037057203752 8 99.51354641484778 0.4180019913190934 0.03782339488791051 0.030628198945223166 9 97.65212977799904 1.6398240482894881 0.30589305994181615 0.4021531137696604 10 46.558848924220975 41.2861315515176 4.088427013488075 8.066592510773347 11 31.963782883990106 26.667729740661798 22.133297811104715 19.235189564243377 12 29.47288383453383 17.29861229950684 27.369941971717044 25.85856189424229 13 23.773705253659827 18.78082266370043 30.008148073243206 27.437324009396534 14 23.300669736616936 19.90580127257736 29.74134242909815 27.052186561707558 15 24.695370960967033 19.695098710309743 27.994757230199596 27.614773098523628 16 27.696837225221298 21.49623127304407 24.684092005164985 26.122839496569643 17 30.11967361035486 20.60392974377324 23.05262994134943 26.223766704522472 18 27.554197327276402 20.41666018450816 24.322095863345726 27.707046624869708 19 29.264806546461518 19.93010936697833 23.177087384682398 27.62799670187775 20 26.579928903685495 20.96573142083729 25.3931105026525 27.061229172824717 21 28.820746277944586 19.526886697055026 25.760162728107154 25.89220429689323 22 29.150558502776956 18.599484279469188 25.50852533486831 26.741431882885546 23 26.49815647412063 21.970822508128627 24.552244901134117 26.978776116616626 24 26.94766175578338 22.10335023880272 24.176344529317507 26.77264347609639 25 27.729312839341 23.24826148508844 23.177962476080836 25.844463199489727 26 28.070501252353026 23.39936059988488 22.81752205230324 25.712616095458856 27 27.145237947074474 20.303870626487655 23.826794131831548 28.724097294606327 28 28.307651021328894 21.142694348076354 23.08743913253162 27.46221549806313 29 28.906116305480793 21.33433936433361 22.546243718788407 27.21330061139719 30 27.16001726847026 21.054504581589633 24.802812738219327 26.98266541172078 31 29.479009474322876 22.26961760450536 21.572655921840724 26.678716999331044 32 29.101456152086996 23.0819941193858 22.49704413572084 25.319505592806358 33 29.39509793245072 22.288091756250097 22.26008883150018 26.056721479799 34 26.854415905661256 24.763433625289753 24.547577747009132 23.834572722039855 35 28.847971343673674 23.706128751225126 24.04673376997153 23.399166135129672 36 29.430393285520935 24.206194869241898 21.465019679833226 24.898392165403944 37 29.31138085533378 24.401340251092893 21.488452682835764 24.798826210737566 38 29.984617837863066 23.449143577218067 21.95886292568335 24.60737565923552 39 28.013912008587567 23.64710869801957 22.564134476267522 25.77484481712534 40 27.760621664929445 24.29263445293175 23.797429953795174 24.149313928343627 41 26.83944211951026 24.008618677950807 23.144125608674685 26.00781359386425 42 27.03799063457739 22.664867219465144 23.710601440594907 26.58654070536256 43 27.097691314426175 22.080695094821014 24.801257020177665 26.02035657057515 44 25.09295415298931 22.966190357659578 26.062555422455237 25.878300066895875 45 27.092926927923582 22.055998070909627 24.776754461021486 26.0743205401453 46 26.655089531573296 23.86490922385227 24.15689805379673 25.3231031907777 47 26.351043886805954 23.110774903156553 24.469111218282798 26.069069991754695 48 27.750315032903437 23.23542681124473 23.688237993746014 25.326020162105824 49 26.595486084102117 23.481619191337764 23.4675204965852 26.45537422797492 50 25.165392274304203 24.65570015090465 23.96700322033635 26.211904354454802 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 2.5 6 4.0 7 42.0 8 80.0 9 573.5 10 1067.0 11 1415.0 12 1763.0 13 2355.5 14 2948.0 15 2343.0 16 1738.0 17 2300.5 18 2863.0 19 2952.5 20 3042.0 21 3199.0 22 3356.0 23 3355.5 24 3355.0 25 3863.0 26 4371.0 27 6055.5 28 7740.0 29 9199.5 30 10659.0 31 11474.0 32 12289.0 33 13223.0 34 14157.0 35 17342.0 36 20527.0 37 22857.0 38 25187.0 39 24873.0 40 24559.0 41 26257.0 42 27955.0 43 32795.5 44 37636.0 45 39960.0 46 42284.0 47 44720.0 48 47156.0 49 50695.0 50 54234.0 51 58491.5 52 62749.0 53 63368.5 54 63988.0 55 75605.5 56 87223.0 57 87908.5 58 88594.0 59 89075.0 60 89556.0 61 81511.5 62 73467.0 63 70995.5 64 68524.0 65 57107.0 66 45690.0 67 37508.5 68 29327.0 69 26586.5 70 23846.0 71 20237.0 72 16628.0 73 16954.0 74 17280.0 75 13020.5 76 8761.0 77 5654.0 78 2547.0 79 1741.0 80 935.0 81 601.5 82 268.0 83 177.0 84 86.0 85 51.0 86 16.0 87 11.0 88 6.0 89 3.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1028464.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.808577594488202 #Duplication Level Percentage of deduplicated Percentage of total 1 69.83315201292616 6.849638901864763 2 11.769174897876725 2.308777304178532 3 4.668389270390197 1.3737077519969525 4 2.2615577429721885 0.8873065842543328 5 1.2027616255998588 0.5898690366184492 6 0.7318548757438479 0.4307073201982833 7 0.4679072135969071 0.32126529481102206 8 0.3139377458190637 0.24634261917640005 9 0.20795876156016863 0.18358016842949262 >10 2.9734103696141934 7.981912739838201 >50 2.6824680637776983 19.435569669173674 >100 2.746455375026961 47.68151642802095 >500 0.11497719990101951 7.6146543366500365 >1k 0.025994845195013105 4.095151844788904 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGCATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3930 0.3821232439832605 No Hit TAGCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3008 0.29247499183248027 No Hit TAGCATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2868 0.27886245896793665 No Hit TAGCATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2437 0.23695530422066305 No Hit TAGCATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2155 0.209535773736368 No Hit TAGCATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1965 0.19106162199163024 No Hit TAGCATGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 1853 0.18017159569999533 No Hit TAGCATGGGATTCTATAAGGTCTGTTCTCTAAAGAACCTTAACTAATGCA 1796 0.174629350176574 No Hit TAGCATGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 1648 0.1602389582911993 No Hit TAGCATGGGACCACTCCCTGGCCAGGTCATCCATCACTGTCAGTCACTGT 1515 0.14730705206988287 No Hit TAGCATGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 1441 0.1401118561271955 No Hit TAGCATGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1396 0.13573639913502078 No Hit TAGCATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1354 0.13165263927565768 No Hit TAGCATGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCC 1340 0.1302913859892033 No Hit TAGCATGGGGGTTCCGCGCCGTCATGTCTGTCCTGACGCCACTGCTGCTG 1292 0.12562423186421695 No Hit TAGCATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 1216 0.11823457116632181 No Hit TAGCATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1104 0.10734454487468692 No Hit TAGCATGGAAAAGAGGATGGGTAAAGGTGAGCAACAGGGGAATGGCTGGG 1096 0.10656668585385584 No Hit TAGCATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1090 0.10598329158823254 No Hit TAGCATGGGAAGCAGTGACTCTCCATTCTTCCTCCCTTTGGACATATAAC 1066 0.10364971452573934 No Hit TAGCATGGGAGTTCCTGGGTCCTGTCCGAAGGCACGCTCAGGAGCAGCCA 1065 0.10355248214813546 No Hit TAGCATGGGTGCTTCCCTGTTCTTGAAGAGTACTTGAATGTCGGGGTCTG 1043 0.10141336984085005 No Hit TAGCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGCATGGGA 1039 0.10102444033043452 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.9446475520776616E-4 0.0 0.0 0.0 0.0 8 4.8616188801941536E-4 0.0 0.0 0.0 0.0 9 4.8616188801941536E-4 0.0 0.0 0.0 0.0 10 0.007681357830706763 0.0 0.0 0.0 0.0 11 0.01516825090620576 0.0 0.0 0.0 0.0 12 0.018863081255153315 0.0 0.0 0.0 0.0 13 0.02275237635930864 0.0 0.0 0.0 0.0 14 0.030822663700430936 0.0 0.0 0.0 0.0 15 0.0379206272655144 0.0 0.0 0.0 0.0 16 0.04851895642433765 0.0 0.0 0.0 0.0 17 0.054547363835778406 0.0 0.0 0.0 0.0 18 0.05795049705191431 0.0 0.0 0.0 0.0 19 0.06456229872897835 0.0 0.0 0.0 0.0 20 0.07029900900760747 0.0 0.0 0.0 0.0 21 0.07749420495029481 0.0 0.0 0.0 0.0 22 0.08332814760652779 0.0 0.0 0.0 0.0 23 0.0908150406820268 0.0 0.0 9.723237760388308E-5 0.0 24 0.0970379128486753 0.0 0.0 9.723237760388308E-5 0.0 25 0.10258015837209664 0.0 0.0 9.723237760388308E-5 0.0 26 0.10763624200749856 0.0 0.0 9.723237760388308E-5 0.0 27 0.1136646494189393 0.0 0.0 9.723237760388308E-5 0.0 28 0.12562423186421692 0.0 0.0 9.723237760388308E-5 0.0 29 0.1332083573173198 0.0 0.0 9.723237760388308E-5 0.0 30 0.14273713032250035 0.0 0.0 9.723237760388308E-5 0.0 31 0.15080741766362266 0.0 0.0 9.723237760388308E-5 0.0 32 0.15936386689276436 0.0 0.0 9.723237760388308E-5 0.0 33 0.16626736570264006 0.0 0.0 9.723237760388308E-5 0.0 34 0.174629350176574 0.0 0.0 9.723237760388308E-5 0.0 35 0.19436752283016226 0.0 0.0 9.723237760388308E-5 0.0 36 0.20185441590566125 0.0 0.0 9.723237760388308E-5 0.0 37 0.21109149177803016 0.0 0.0 9.723237760388308E-5 0.0 38 0.2205230324056068 0.0 0.0 9.723237760388308E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 20 7.856094E-4 44.000004 10 GTATTTC 20 7.856094E-4 44.000004 37 CGACCAA 40 8.310963E-9 44.000004 31 GTCTAAT 20 7.856094E-4 44.000004 40 TAAGTAG 20 7.856094E-4 44.000004 13 CGATTCG 20 7.856094E-4 44.000004 27 CGATTCC 20 7.856094E-4 44.000004 32 CTAAGCG 20 7.856094E-4 44.000004 35 TTATCGA 20 7.856094E-4 44.000004 26 ATCGTTT 20 7.856094E-4 44.000004 34 TTATATC 20 7.856094E-4 44.000004 15 CATTAGA 20 7.856094E-4 44.000004 39 ACGATAC 65 0.0 44.000004 35 TACGCGC 20 7.856094E-4 44.000004 43 CTACGTT 20 7.856094E-4 44.000004 40 CGTAGCG 20 7.856094E-4 44.000004 12 TTAAGCG 20 7.856094E-4 44.000004 12 TACGACG 40 8.310963E-9 44.000004 16 AACGCGT 20 7.856094E-4 44.000004 16 ATCCAAC 20 7.856094E-4 44.000004 17 >>END_MODULE