##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527203_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1100428 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.680851450526525 34.0 31.0 34.0 31.0 34.0 2 32.93463815897087 34.0 31.0 34.0 31.0 34.0 3 33.02284474768 34.0 31.0 34.0 31.0 34.0 4 36.33500692457844 37.0 37.0 37.0 35.0 37.0 5 36.146184030213696 37.0 37.0 37.0 35.0 37.0 6 36.30934963486934 37.0 37.0 37.0 35.0 37.0 7 36.60156320995104 37.0 37.0 37.0 35.0 37.0 8 36.67185676845737 37.0 37.0 37.0 35.0 37.0 9 38.73053575517889 39.0 39.0 39.0 39.0 39.0 10 38.18032801782579 39.0 39.0 39.0 37.0 39.0 11 37.98371906203768 39.0 38.0 39.0 35.0 39.0 12 37.65484702315826 39.0 37.0 39.0 35.0 39.0 13 37.55820189962451 39.0 37.0 39.0 35.0 39.0 14 38.449467843420926 40.0 38.0 40.0 35.0 40.0 15 38.36453089161672 40.0 38.0 40.0 35.0 40.0 16 33.21785069082212 40.0 35.0 40.0 3.0 40.0 17 35.001773855263586 40.0 35.0 40.0 17.0 40.0 18 37.10335614869851 40.0 35.0 40.0 32.0 40.0 19 37.96735270276656 40.0 37.0 40.0 34.0 40.0 20 38.17360699655043 40.0 38.0 40.0 34.0 40.0 21 38.37586284609261 40.0 38.0 40.0 35.0 40.0 22 38.391516755298845 40.0 38.0 40.0 35.0 40.0 23 38.351343295517744 40.0 38.0 40.0 35.0 40.0 24 38.32968535878767 40.0 38.0 40.0 35.0 40.0 25 38.268893557779336 40.0 38.0 40.0 35.0 40.0 26 38.18881108077948 40.0 38.0 40.0 35.0 40.0 27 38.052944854184005 40.0 38.0 40.0 34.0 40.0 28 38.00090782859033 40.0 38.0 40.0 34.0 40.0 29 37.8047450628301 40.0 38.0 40.0 34.0 40.0 30 37.80316113366799 40.0 38.0 40.0 34.0 40.0 31 37.77232949361521 40.0 37.0 40.0 34.0 40.0 32 37.702585721192115 40.0 37.0 40.0 33.0 40.0 33 37.3859525566416 40.0 37.0 40.0 33.0 40.0 34 37.42218936631929 40.0 37.0 40.0 33.0 40.0 35 37.31414413301007 40.0 36.0 40.0 33.0 40.0 36 37.26365559582272 40.0 36.0 40.0 33.0 40.0 37 36.91295205138364 39.0 35.0 40.0 32.0 40.0 38 36.9378260095163 39.0 35.0 40.0 32.0 40.0 39 36.5661987881079 39.0 35.0 40.0 31.0 40.0 40 36.52129807674832 39.0 35.0 40.0 31.0 40.0 41 36.501037778028184 39.0 35.0 40.0 31.0 40.0 42 36.417118612030954 39.0 35.0 40.0 31.0 40.0 43 36.29408739145133 38.0 35.0 40.0 31.0 40.0 44 36.55875441191973 39.0 35.0 40.0 31.0 40.0 45 36.63556089085338 39.0 35.0 40.0 32.0 40.0 46 36.55643622299687 39.0 35.0 40.0 32.0 40.0 47 36.275339231644416 39.0 35.0 40.0 31.0 40.0 48 36.243866931775635 38.0 35.0 40.0 31.0 40.0 49 36.17283911350856 38.0 35.0 40.0 31.0 40.0 50 35.672093948899885 38.0 35.0 40.0 30.0 40.0 51 35.740752688953755 37.0 35.0 40.0 30.0 40.0 52 35.41285299901493 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 5.0 16 13.0 17 31.0 18 99.0 19 186.0 20 306.0 21 545.0 22 932.0 23 1577.0 24 2331.0 25 3199.0 26 4460.0 27 6343.0 28 8468.0 29 11331.0 30 14771.0 31 19099.0 32 25562.0 33 37085.0 34 55750.0 35 79245.0 36 122132.0 37 222103.0 38 290215.0 39 194637.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.36406561810496 0.595041202150436 0.024899402777828265 0.0159937769667802 8 99.52091368085873 0.4007531614971629 0.048163078365872185 0.030170079278244465 9 97.6678165222986 1.5792037280040128 0.2918864296437386 0.46109332005365183 10 46.83504963523284 41.06602158432901 4.043790234345182 8.055138546092975 11 32.11777599261379 26.530677154707078 22.020977292471656 19.330569560207483 12 29.443907279712985 17.29954163289193 27.40688168603489 25.8496694013602 13 23.81091720675955 18.83830654981516 29.86010897578033 27.49066726764495 14 23.412345014848768 19.815017429581943 29.695354898275944 27.077282657293345 15 24.71910929202092 19.837735862773393 27.882151308400005 27.56100353680568 16 26.542672487432164 29.208907806780633 21.789067526453344 22.45935217933386 17 30.283126201805118 20.38979378932561 22.879734067108433 26.44734594176084 18 27.770467490830843 20.314641212328294 24.238114624491562 27.676776672349302 19 29.35476014786974 19.901529223174983 23.048304841388987 27.69540578756629 20 26.57665926348657 20.948212877171425 25.36921997622743 27.105907883114572 21 29.102494665711887 19.373734583271236 25.77787915247522 25.74589159854166 22 28.984904055512946 18.4410065901631 25.41674693846394 27.157342415860008 23 26.579112854271248 21.861493891467685 24.555900067973553 27.00349318628752 24 27.123810008469434 21.944098114551792 24.067635501822927 26.86445637515585 25 27.808180089928648 23.014681560265643 23.218511342859323 25.95862700694639 26 28.01673530662615 23.325287978859137 22.935257917828338 25.72271879668638 27 27.16234047116213 20.208137197526778 23.682512622361482 28.94700970894961 28 28.381593343680823 21.049900584136356 22.992144874539726 27.576361197643102 29 29.314684831720022 21.166128088343807 22.37002330002508 27.14916377991109 30 27.31818892285547 21.040631463394245 24.67185495098271 26.96932466276758 31 29.703170039293802 22.059326007698825 21.565427270116718 26.672076682890655 32 29.2998724132792 22.826118564776614 22.449356068729625 25.424652953214565 33 29.858382374857783 22.233258332212557 22.177461860294358 25.730897432635302 34 26.99267921208839 24.630053033910443 24.492833697434087 23.88443405656708 35 29.05642168319963 23.503491368812863 23.9521349874776 23.48795196050991 36 29.444361648376816 24.128611776508777 21.353600599039645 25.073425976074766 37 29.58212622724976 24.16632437560658 21.470373345643694 24.781176051499962 38 29.969066581366523 23.297298869167268 21.88194048133999 24.85169406812622 39 28.40776497871737 23.437698786290426 22.45889781067003 25.69563842432217 40 27.69976772673905 24.218485898214148 23.71795337814014 24.363792996906657 41 26.850916188973745 23.8267292362608 23.33210350881657 25.990251065948883 42 27.162613092360427 22.6117474291821 23.589276172543773 26.6363633059137 43 27.23240411912456 21.986808768951718 24.736466174979192 26.04432093694453 44 25.115954883009156 22.875644749133972 26.068311602394704 25.940088765462164 45 27.0540189817053 21.92792259011948 24.862598916058115 26.1554595121171 46 26.489056985100344 23.692145238034655 24.26601286045066 25.55278491641434 47 26.790666904150022 23.076203077348087 24.271101789485545 25.86202822901635 48 27.963937667889223 23.154172740061142 23.712864449105258 25.169025142944378 49 26.682618035891494 23.25985889126776 23.430701508867458 26.62682156397329 50 25.285343520884602 24.54363211405017 23.834271756080362 26.33675260898487 51 25.299065454532236 24.327352630067573 24.199584161798864 26.173997753601324 52 25.592678485098524 25.40211626748865 22.34148894793662 26.663716299476203 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.5 4 3.0 5 2.0 6 1.0 7 43.0 8 85.0 9 592.5 10 1100.0 11 1457.5 12 1815.0 13 2415.5 14 2410.0 15 1804.0 16 2430.0 17 3056.0 18 3015.5 19 2975.0 20 3160.5 21 3346.0 22 3022.5 23 2699.0 24 3426.0 25 4153.0 26 5268.5 27 6384.0 28 7963.0 29 9542.0 30 10221.5 31 10901.0 32 11766.5 33 12632.0 34 14150.0 35 15668.0 36 19258.0 37 22848.0 38 24853.0 39 25795.5 40 24733.0 41 27240.5 42 29748.0 43 35303.0 44 40858.0 45 41566.5 46 42275.0 47 46148.5 48 50022.0 49 52174.5 50 54327.0 51 57858.0 52 61389.0 53 65263.5 54 69138.0 55 76697.0 56 84256.0 57 91871.0 58 99486.0 59 94422.0 60 89358.0 61 86765.0 62 84172.0 63 77039.5 64 60853.5 65 51800.0 66 43875.5 67 35951.0 68 30620.5 69 25290.0 70 24094.0 71 22898.0 72 21748.5 73 20599.0 74 14839.5 75 9080.0 76 6456.5 77 3833.0 78 2801.5 79 1770.0 80 1131.0 81 492.0 82 307.0 83 122.0 84 76.0 85 30.0 86 17.5 87 5.0 88 3.0 89 0.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1100428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.588859571092316 #Duplication Level Percentage of deduplicated Percentage of total 1 69.23013350664762 8.02298295296512 2 10.437223155313834 2.4191102691817017 3 4.306449481164416 1.4972051486165334 4 2.37413173450522 1.1005391709781926 5 1.5118440137903195 0.8760273984606283 6 1.0177723610490652 0.707689258052201 7 0.7523110394942378 0.6102898893336844 8 0.6105449703895128 0.5660415938944624 9 0.504660566401912 0.52635963915897 >10 4.811736136613663 12.823812303442722 >50 2.279703484625732 19.298073573795577 >100 2.064787304161714 41.98405433890672 >500 0.0811905570641846 6.188117137664988 >1k 0.017511688778549618 3.3796973255484977 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGCATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3450 0.3135143780419982 No Hit TAGCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2944 0.2675322692625051 No Hit TAGCATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2841 0.25817227478762805 No Hit TAGCATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2323 0.21109968121494543 No Hit TAGCATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2138 0.1942880406532731 No Hit TAGCATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1997 0.18147484433329578 No Hit TAGCATGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1848 0.16793465815119207 No Hit TAGCATGGGATTCTATAAGGTCTGTTCTCTAAAGAACCTTAACTAATGCATC 1784 0.1621187392541811 No Hit TAGCATGGGACCACTCCCTGGCCAGGTCATCCATCACTGTCAGTCACTGTCT 1543 0.14021816965762413 No Hit TAGCATGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 1507 0.13694671527805546 No Hit TAGCATGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 1377 0.12513313001850188 No Hit TAGCATGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1345 0.1222251705699964 No Hit TAGCATGGGGGTTCCGCGCCGTCATGTCTGTCCTGACGCCACTGCTGCTGAG 1311 0.11913546365595931 No Hit TAGCATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1308 0.11886284245766193 No Hit TAGCATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1279 0.11622750420745383 No Hit TAGCATGGGGTTCTCAATGTTATTCTGTAGTAAATGGCACTATTATGAAGCC 1214 0.11032071157767705 No Hit TAGCATGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTT 1191 0.10823061572406373 No Hit TAGCATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1133 0.10295993922364753 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.8174746553159315E-4 0.0 0.0 0.0 0.0 8 3.634949310631863E-4 0.0 0.0 0.0 0.0 9 5.452423965947795E-4 0.0 0.0 0.0 0.0 10 0.007360772354029523 0.0 0.0 0.0 0.0 11 0.012904070052743114 0.0 0.0 0.0 0.0 12 0.014903292173590639 0.0 0.0 0.0 0.0 13 0.01890173641528569 0.0 0.0 0.0 0.0 14 0.025717266372720433 0.0 0.0 0.0 0.0 15 0.03298716499398416 0.0 0.0 0.0 0.0 16 0.04480075025353771 0.0 0.0 0.0 0.0 17 0.05034404795225131 0.0 0.0 0.0 0.0 18 0.055523850719901714 0.0 0.0 0.0 0.0 19 0.06243025441010225 0.0 0.0 0.0 0.0 20 0.06588345625520252 0.0 0.0 0.0 0.0 21 0.0717902488849793 0.0 0.0 0.0 0.0 22 0.07778791524752188 0.0 0.0 0.0 0.0 23 0.08442169773942503 0.0 0.0 0.0 0.0 24 0.09023761663643601 0.0 0.0 0.0 0.0 25 0.09732576779216814 0.0 0.0 0.0 0.0 26 0.10277819175811594 0.0 0.0 0.0 0.0 27 0.10795799452576633 0.0 0.0 0.0 0.0 28 0.11822672632830135 0.0 0.0 0.0 0.0 29 0.12567837241509666 0.0 0.0 0.0 0.0 30 0.1332208922346578 0.0 0.0 0.0 0.0 31 0.13930943232996615 0.0 0.0 0.0 0.0 32 0.1486694268048432 0.0 0.0 0.0 0.0 33 0.1538492295724936 0.0 0.0 0.0 0.0 34 0.16084650699545994 0.0 0.0 0.0 0.0 35 0.17911212728138506 0.0 0.0 0.0 0.0 36 0.1890173641528569 0.0 0.0 0.0 0.0 37 0.19737774756731016 0.0 0.0 0.0 0.0 38 0.2075556056370794 0.0 0.0 0.0 0.0 39 0.21718822131025384 0.0 0.0 0.0 0.0 40 0.22782044804385204 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTACGC 35 1.0195254E-7 46.000004 27 CCGTATT 35 1.0195254E-7 46.000004 45 TGTTACG 35 1.0195254E-7 46.000004 26 ATCGCTA 35 1.0195254E-7 46.000004 43 TCACGAA 40 5.6115823E-9 46.0 11 AACCGAT 60 0.0 46.0 40 ACGCATT 25 3.4170604E-5 46.0 22 CGACGAA 20 6.311337E-4 46.0 20 GCGCGTA 65 0.0 46.0 10 GACCGTT 20 6.311337E-4 46.0 46 CGGTTAG 25 3.4170604E-5 46.0 42 CGACCAA 30 1.86133E-6 46.0 31 CGTCTAA 50 1.6370905E-11 46.0 16 CACGATA 90 0.0 46.0 34 GTCTAAT 20 6.311337E-4 46.0 40 CACGAAT 45 3.092282E-10 46.0 44 TACGGAT 20 6.311337E-4 46.0 20 CGTTCAT 20 6.311337E-4 46.0 43 CGTTCAC 20 6.311337E-4 46.0 29 TTATATC 30 1.86133E-6 46.0 15 >>END_MODULE