SRR1527202_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527202_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1070424
Sequences flagged as poor quality	0
Sequence length	52
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAGCATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT	3808	0.35574688160953044	No Hit
TAGCATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC	2789	0.26055095924605576	No Hit
TAGCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG	2780	0.25971017092292403	No Hit
TAGCATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC	2207	0.20617998101686807	No Hit
TAGCATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG	2065	0.19291420969634462	No Hit
TAGCATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG	1883	0.17591160138412443	No Hit
TAGCATGGGATTCTATAAGGTCTGTTCTCTAAAGAACCTTAACTAATGCATC	1762	0.16460766948424174	No Hit
TAGCATGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT	1695	0.1583484675231497	No Hit
TAGCATGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC	1503	0.1404116499630053	No Hit
TAGCATGGGACCACTCCCTGGCCAGGTCATCCATCACTGTCAGTCACTGTCT	1432	0.13377876430274357	No Hit
TAGCATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC	1360	0.12705245771768944	No Hit
TAGCATGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG	1351	0.12621166939455766	No Hit
TAGCATGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT	1297	0.12116693945576706	No Hit
TAGCATGGGGGTTCCGCGCCGTCATGTCTGTCCTGACGCCACTGCTGCTGAG	1277	0.11929852095991869	No Hit
TAGCATGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTT	1252	0.1169629978401082	No Hit
TAGCATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG	1126	0.10519196131626347	No Hit
TAGCATGGGAAGATCTTTGAGGAAGACGCAGTGGAATTCATCAGTGTGCCTG	1091	0.10192222894852881	No Hit
TAGCATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA	1088	0.10164196617415155	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATTA	20	6.3112576E-4	46.000004	34
TAGACGC	40	5.6115823E-9	46.000004	27
ACGCAAT	20	6.3112576E-4	46.000004	31
CGGTTAT	20	6.3112576E-4	46.000004	37
CGTCTAT	35	1.019489E-7	46.000004	33
CAATTCG	20	6.3112576E-4	46.000004	34
CGCGAAT	20	6.3112576E-4	46.000004	16
AAAACGA	20	6.3112576E-4	46.000004	35
CGTTATG	20	6.3112576E-4	46.000004	16
TACGCGT	20	6.3112576E-4	46.000004	31
TACGCAA	20	6.3112576E-4	46.000004	30
TCTACGA	20	6.3112576E-4	46.000004	13
TCTAACG	20	6.3112576E-4	46.000004	37
TATTATC	20	6.3112576E-4	46.000004	36
AATTCGA	20	6.3112576E-4	46.000004	35
CATACGT	40	5.6115823E-9	46.000004	11
CGTACGG	20	6.3112576E-4	46.000004	33
ACTCGCT	35	1.019489E-7	46.000004	21
TTACGCA	20	6.3112576E-4	46.000004	29
TATCGTG	20	6.3112576E-4	46.000004	21