##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527198_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1701597 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.62207855326496 34.0 31.0 34.0 31.0 34.0 2 32.94177763595023 34.0 31.0 34.0 31.0 34.0 3 33.06117782295103 34.0 33.0 34.0 31.0 34.0 4 36.474014117326256 37.0 37.0 37.0 35.0 37.0 5 36.48482631316346 37.0 37.0 37.0 35.0 37.0 6 36.32493357710433 37.0 37.0 37.0 35.0 37.0 7 36.54736579812964 37.0 37.0 37.0 35.0 37.0 8 36.66019451139136 37.0 37.0 37.0 35.0 37.0 9 38.68137461455327 39.0 39.0 39.0 39.0 39.0 10 38.16828602777273 39.0 39.0 39.0 37.0 39.0 11 37.90021491575267 39.0 38.0 39.0 35.0 39.0 12 37.51515840707288 39.0 37.0 39.0 35.0 39.0 13 37.39508826120403 39.0 37.0 39.0 35.0 39.0 14 38.221442562486885 40.0 38.0 40.0 35.0 40.0 15 38.1879075950416 40.0 38.0 40.0 34.0 40.0 16 38.07105619015548 40.0 38.0 40.0 34.0 40.0 17 38.15862862945809 40.0 38.0 40.0 34.0 40.0 18 38.10857858823211 40.0 38.0 40.0 34.0 40.0 19 38.02055539590162 40.0 38.0 40.0 34.0 40.0 20 37.817245211410224 40.0 38.0 40.0 33.0 40.0 21 37.98948340882124 40.0 38.0 40.0 34.0 40.0 22 37.81029938346153 40.0 38.0 40.0 34.0 40.0 23 37.800660203326636 40.0 37.0 40.0 34.0 40.0 24 37.79362152142957 40.0 37.0 40.0 34.0 40.0 25 37.69395456150898 40.0 37.0 40.0 34.0 40.0 26 37.52676573830349 40.0 37.0 40.0 33.0 40.0 27 37.38247951777066 40.0 36.0 40.0 33.0 40.0 28 37.19599059001632 39.0 36.0 40.0 33.0 40.0 29 37.41986968712333 40.0 36.0 40.0 33.0 40.0 30 37.42144467814647 40.0 36.0 40.0 33.0 40.0 31 37.36179483156118 40.0 36.0 40.0 33.0 40.0 32 36.59991819449611 40.0 35.0 40.0 31.0 40.0 33 36.70793143147291 39.0 35.0 40.0 31.0 40.0 34 36.64145740736496 39.0 35.0 40.0 31.0 40.0 35 36.58890442331528 39.0 35.0 40.0 31.0 40.0 36 36.304201288554225 39.0 35.0 40.0 31.0 40.0 37 36.147540810191835 39.0 35.0 40.0 30.0 40.0 38 35.88094360768149 39.0 35.0 40.0 30.0 40.0 39 35.75226507804139 38.0 35.0 40.0 29.0 40.0 40 35.57183046279466 38.0 35.0 40.0 29.0 40.0 41 35.42362909666625 37.0 35.0 40.0 29.0 40.0 42 35.25244050148184 37.0 35.0 40.0 28.0 40.0 43 35.115055444973166 37.0 35.0 40.0 28.0 40.0 44 34.90445857626688 37.0 34.0 40.0 27.0 40.0 45 34.77723456259032 36.0 34.0 40.0 27.0 40.0 46 34.42782750557271 35.0 34.0 40.0 26.0 40.0 47 34.28573510649114 35.0 34.0 39.0 26.0 40.0 48 34.08148874263413 35.0 34.0 39.0 26.0 40.0 49 33.75074532924071 35.0 33.0 39.0 24.0 40.0 50 33.36134877999903 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 4.0 15 13.0 16 60.0 17 174.0 18 370.0 19 761.0 20 1478.0 21 2254.0 22 3307.0 23 4510.0 24 6368.0 25 8800.0 26 11515.0 27 15135.0 28 19972.0 29 24679.0 30 29782.0 31 36244.0 32 44047.0 33 57795.0 34 97328.0 35 132819.0 36 184165.0 37 320439.0 38 482980.0 39 216595.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.46085941618374 0.34943644117849293 0.1279386364691522 0.06176550616861689 8 98.96620645193897 0.7880831947870148 0.0989070855202495 0.14680326775376307 9 94.55470361078446 3.257057928522441 1.0617672692182696 1.1264711914748322 10 52.83718765371589 30.791603417260372 6.474447239857615 9.896761689166118 11 33.073988729411255 23.223771551078194 20.639845979982336 23.06239373952822 12 27.214375671795377 17.612337116250202 30.573337870247773 24.599949341706644 13 23.076321831785084 17.61962438814831 32.380404996012565 26.923648784054038 14 24.731414077481332 18.670695822806458 29.9299422836312 26.66794781608101 15 23.686689621573144 19.16258667592855 29.232127231065874 27.918596471432426 16 29.568634641457407 18.596412664103195 26.338139994369996 25.496812700069405 17 30.851899715385017 18.402829812229335 24.062336734256114 26.682933738129535 18 30.711854804633532 19.39724858471189 23.26755395078858 26.623342659865994 19 30.274148344173152 19.52307156159772 22.108348804094035 28.09443129013509 20 28.807643643001253 21.24950854990929 23.0342437134057 26.908604093683756 21 30.69081574544384 19.24221775191188 25.53083955836782 24.536126944276464 22 32.07810074888472 18.881674097920953 22.331080743560314 26.709144409634007 23 29.687111578123375 20.950730402086982 22.610347808558664 26.751810211230982 24 30.02250239040149 19.559625457731766 23.09318834012989 27.324683811736854 25 28.013683616038342 18.837245246671216 23.790004331225315 29.359066806065126 26 28.922712017005203 18.85646248788638 23.10253250328956 29.118292991818862 27 29.04512643122902 17.35969210100864 23.58425643674736 30.010925031014985 28 29.543070421492278 19.745157049524654 22.615754494160488 28.096018034822585 29 30.34566939175375 20.182863509985033 22.03729790308751 27.43416919517371 30 30.31804828052706 20.634145452771723 21.516845645590582 27.53096062111064 31 32.65156203260819 20.956372160975835 20.043347514129373 26.3487182922866 32 33.96526909720692 20.42675204528452 21.71324937690887 23.894729480599697 33 32.46832240536391 19.850940028690694 22.06115784172163 25.619579724223772 34 30.0651094236767 22.73758122516671 23.772079993088845 23.425229358067746 35 30.66695580680972 23.32608719926046 23.6221032359601 22.38485375796972 36 31.900973027103362 23.628802824640616 20.285708073063127 24.184516075192892 37 31.728076624488644 24.35935183242566 20.63567342913745 23.27689811394825 38 32.92072094626401 23.062099897919424 20.304925314278293 23.71225384153827 39 30.986949318786998 22.620749801509994 20.972180839528985 25.420120040174027 40 29.470315239154747 23.25668181126318 22.29011922329435 24.982883726287717 41 27.7783164873939 22.79546802209924 21.934923486583486 27.491292003923373 42 27.50163522855294 21.938332049245503 23.72477149407292 26.835261228128633 43 25.894321628446686 21.223297878404814 25.117404414793864 27.764976078354632 44 26.66677244964583 20.65841676965815 25.119343769411913 27.555467011284108 45 27.302645691077267 21.817739452996214 24.24827970430131 26.63133515162521 46 28.1986862929354 21.977883129789248 22.709078589113638 27.11435198816171 47 28.05182425685988 22.232761341257653 23.22024545177266 26.49516895010981 48 28.394678646001374 23.075616611923973 23.875335934419255 24.6543688076554 49 27.84966123000922 22.677049853755033 23.856471303134644 25.616817613101105 50 25.667769748066082 24.07056429930236 23.42769762758162 26.833968325049938 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 17.5 4 35.0 5 120.5 6 206.0 7 292.5 8 379.0 9 1735.5 10 3092.0 11 2861.0 12 2630.0 13 2583.0 14 2536.0 15 2472.0 16 2408.0 17 2546.0 18 2684.0 19 3686.0 20 4688.0 21 4943.5 22 5199.0 23 6542.0 24 7885.0 25 8172.0 26 8459.0 27 10836.5 28 13214.0 29 15109.5 30 17005.0 31 18552.0 32 20099.0 33 21825.0 34 23551.0 35 23019.0 36 22487.0 37 25536.5 38 28586.0 39 29007.0 40 29428.0 41 33040.5 42 36653.0 43 40033.5 44 43414.0 45 43297.0 46 43180.0 47 46596.0 48 50012.0 49 56817.0 50 63622.0 51 77479.0 52 91336.0 53 97717.0 54 104098.0 55 132689.0 56 161280.0 57 168828.5 58 176377.0 59 171392.0 60 166407.0 61 162905.0 62 159403.0 63 144623.0 64 129843.0 65 109971.0 66 90099.0 67 78152.0 68 66205.0 69 56414.5 70 46624.0 71 37946.5 72 29269.0 73 31398.0 74 33527.0 75 22059.5 76 10592.0 77 6756.0 78 2920.0 79 2270.5 80 1621.0 81 1036.0 82 451.0 83 256.5 84 62.0 85 40.5 86 19.0 87 14.5 88 10.0 89 5.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1701597.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.748497766097874 #Duplication Level Percentage of deduplicated Percentage of total 1 69.72230699483055 6.7968775398629555 2 10.33044611087698 2.0141266166935736 3 4.674047234466753 1.3669481707150526 4 2.6393302718437655 1.0291802103625374 5 1.5996413574158215 0.7797050099662951 6 1.018322610030367 0.5956269413428792 7 0.6963367256070073 0.4751765909822273 8 0.46771327544224495 0.3647601456658435 9 0.3983565533825042 0.3495040173683811 >10 3.7069891121514225 8.695546330673137 >50 2.166529736779009 15.457898439294809 >100 2.4166106054675374 43.00245395583199 >500 0.10681846150012515 7.077297581109786 >1k 0.051524199076530955 8.988425195188245 >5k 0.005026751129417655 3.006473254942276 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACTTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 7897 0.46409343693013094 No Hit TACTTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 7647 0.44940135649040286 No Hit TACTTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 7042 0.41384652182626086 No Hit TACTTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5500 0.323225769674018 No Hit TACTTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 5449 0.32022858526431347 No Hit TACTTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 5371 0.3156446561671183 No Hit TACTTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5139 0.3020104055190506 No Hit TACTTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 5037 0.2960160366996416 No Hit TACTTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4983 0.2928425473246603 No Hit TACTTCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 3856 0.22661064870236608 No Hit TACTTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 3657 0.2149157526723425 No Hit TACTTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 3334 0.19593358474421382 No Hit TACTTCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTACTTCGGGA 3280 0.19276009536923255 No Hit TACTTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3260 0.19158472893405432 No Hit TACTTCGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTT 3182 0.18700079983685916 No Hit TACTTCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 3013 0.17706895345960294 No Hit TACTTCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 2778 0.16325839784625854 No Hit TACTTCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 2708 0.15914461532313467 No Hit TACTTCGGGGGGGGCTGGTGAGATGGCTCAGCGGTTAGGAGCGCCGACTG 2586 0.15197488006854737 No Hit TACTTCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 2494 0.14656819446672742 No Hit TACTTCGGGATTCAAATGACTGGAGATCTGGGAGATTTTTGGAGTGCTTC 2322 0.1364600431241945 No Hit TACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2308 0.13563728661956975 No Hit TACTTCGGGATTCTATGAAAGTTGAGTTAAATGATAGCTAAAATATCTGT 2289 0.1345206885061504 No Hit TACTTCGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGC 2255 0.13252256556634737 No Hit TACTTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2200 0.1292903078696072 No Hit TACTTCGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGA 2110 0.12400115891130509 No Hit TACTTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 2092 0.12294332911964466 No Hit TACTTCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 2089 0.12276702415436794 No Hit TACTTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 2051 0.12053382792752926 No Hit TACTTCGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAA 1976 0.11612620379561082 No Hit TACTTCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1968 0.11565605722153953 No Hit TACTTCGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACT 1955 0.11489206903867366 No Hit TACTTCGGAGAATTTTTTTAACTCTAGCACAAAGCTCTTGCTCATGAAAT 1951 0.11465699575163803 No Hit TACTTCGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTG 1926 0.1131877877076652 No Hit TACTTCGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 1904 0.11189488462896914 No Hit TACTTCGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGA 1894 0.11130720141138001 No Hit TACTTCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 1871 0.10995553001092503 No Hit TACTTCGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAACA 1867 0.10972045672388937 No Hit TACTTCGGGACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGC 1847 0.10854509028871114 No Hit TACTTCGGGACTACACAGCAAATCTACGTCAGTGTGTCCTGAGTGAGGCA 1759 0.10337347797392685 No Hit TACTTCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 1749 0.10278579475633773 No Hit TACTTCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 1738 0.10213934321698968 No Hit TACTTCGGGGCCTTTCGCTGCTGCGGCCGCAGCCATGAGTATGCTCAGGC 1736 0.10202180657347187 No Hit TACTTCGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 1722 0.1011990500688471 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.5260993055347416E-4 0.0 0.0 0.0 0.0 8 0.0022919645485975824 0.0 0.0 0.0 0.0 9 0.0036436359490525667 0.0 0.0 0.0 0.0 10 0.02039260765034259 0.0 0.0 0.0 0.0 11 0.036142517881731104 0.0 0.0 0.0 0.0 12 0.04918908531220965 0.0 0.0 0.0 0.0 13 0.0594147732982604 0.0 0.0 0.0 0.0 14 0.0789258561222193 0.0 0.0 0.0 0.0 15 0.10008245195542775 0.0 0.0 0.0 0.0 16 0.11924092484883318 0.0 0.0 0.0 0.0 17 0.13410931025383802 0.0 0.0 0.0 0.0 18 0.14509898642275462 0.0 0.0 0.0 0.0 19 0.1621417997328392 0.0 0.0 0.0 0.0 20 0.1768338801725673 0.0 0.0 0.0 0.0 21 0.18976291095952802 0.0 0.0 0.0 0.0 22 0.20263317342472983 0.0 0.0 0.0 0.0 23 0.2177366321167703 0.0 0.0 0.0 0.0 24 0.23372161563519447 0.0 0.0 0.0 0.0 25 0.24694448803094976 0.0 0.0 0.0 0.0 26 0.26210671504474914 0.0 0.0 0.0 0.0 27 0.2807950413640833 0.0 0.0 0.0 0.0 28 0.30959151902595033 0.0 0.0 0.0 0.0 29 0.321874098273563 0.0 0.0 0.0 0.0 30 0.3363898737480144 0.0 0.0 0.0 0.0 31 0.3503767343266355 0.0 0.0 0.0 0.0 32 0.36501004644460466 0.0 0.0 0.0 0.0 33 0.37570588100472674 0.0 0.0 0.0 0.0 34 0.3910444129838029 0.0 0.0 0.0 0.0 35 0.42883244387478353 0.0 0.0 0.0 0.0 36 0.44469989074968985 0.0 0.0 0.0 0.0 37 0.4582753730759986 0.0 0.0 0.0 0.0 38 0.47402528330738714 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGAG 65 0.0 44.000004 23 TACGTCA 220 0.0 44.000004 25 ATTTACG 30 2.528437E-6 44.0 20 GTACCGT 35 1.4466423E-7 44.0 22 GTATTAC 30 2.528437E-6 44.0 30 ATAGGGC 20 7.857551E-4 44.0 37 CGAAACT 20 7.857551E-4 44.0 22 ACGTTAC 20 7.857551E-4 44.0 22 ATTACCG 20 7.857551E-4 44.0 34 CCAATTA 20 7.857551E-4 44.0 34 TAACGGC 50 2.7284841E-11 44.0 25 TAACGCG 20 7.857551E-4 44.0 20 GTTACGT 25 4.4437445E-5 44.0 39 CCGTATA 45 4.802132E-10 44.0 17 CTAGTAG 20 7.857551E-4 44.0 13 TCGTCAA 35 1.4466423E-7 44.0 20 AATCTCG 30 2.528437E-6 44.0 27 AACGATA 20 7.857551E-4 44.0 44 AAACACG 25 4.4437445E-5 44.0 42 AACGAAC 45 4.802132E-10 44.0 12 >>END_MODULE