##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527197_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1835351 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5165796624188 34.0 31.0 34.0 31.0 34.0 2 32.847686355362 34.0 31.0 34.0 31.0 34.0 3 32.980450061050995 34.0 31.0 34.0 31.0 34.0 4 36.405612332463924 37.0 37.0 37.0 35.0 37.0 5 36.4380219369483 37.0 37.0 37.0 35.0 37.0 6 36.282439707718034 37.0 37.0 37.0 35.0 37.0 7 36.5107099404964 37.0 37.0 37.0 35.0 37.0 8 36.60835011940495 37.0 37.0 37.0 35.0 37.0 9 38.639136056263894 39.0 39.0 39.0 38.0 39.0 10 38.05126757770039 39.0 38.0 39.0 37.0 39.0 11 37.789468063602 39.0 38.0 39.0 35.0 39.0 12 37.43964887370318 39.0 37.0 39.0 35.0 39.0 13 37.36650210232266 39.0 37.0 39.0 35.0 39.0 14 38.20456305088236 40.0 38.0 40.0 35.0 40.0 15 38.0760497583296 40.0 38.0 40.0 34.0 40.0 16 33.012951201159886 40.0 35.0 40.0 3.0 40.0 17 34.715375968956344 40.0 35.0 40.0 17.0 40.0 18 36.755909360116945 40.0 35.0 40.0 30.0 40.0 19 37.597067808827845 40.0 37.0 40.0 33.0 40.0 20 37.87286410065432 40.0 38.0 40.0 34.0 40.0 21 38.072552879530946 40.0 38.0 40.0 34.0 40.0 22 38.09830217762161 40.0 38.0 40.0 34.0 40.0 23 38.007374611177916 40.0 38.0 40.0 34.0 40.0 24 37.940849461492654 40.0 37.0 40.0 34.0 40.0 25 37.83505117004867 40.0 37.0 40.0 34.0 40.0 26 37.71899816438381 40.0 37.0 40.0 33.0 40.0 27 37.59889252791428 40.0 37.0 40.0 33.0 40.0 28 37.47126952828096 40.0 36.0 40.0 33.0 40.0 29 37.2316063793792 40.0 36.0 40.0 33.0 40.0 30 37.1887301121148 40.0 36.0 40.0 32.0 40.0 31 37.116542830227026 39.0 35.0 40.0 32.0 40.0 32 36.97824939207813 39.0 35.0 40.0 32.0 40.0 33 36.57212435114591 39.0 35.0 40.0 31.0 40.0 34 36.43214186278265 39.0 35.0 40.0 31.0 40.0 35 36.302743181004615 39.0 35.0 40.0 30.0 40.0 36 36.16150861606309 38.0 35.0 40.0 30.0 40.0 37 35.745893837200626 38.0 35.0 40.0 29.0 40.0 38 35.68277675496404 38.0 35.0 40.0 29.0 40.0 39 35.222491501625576 37.0 34.0 40.0 28.0 40.0 40 35.13232564234307 37.0 34.0 40.0 28.0 40.0 41 35.06317102287247 37.0 34.0 40.0 28.0 40.0 42 34.93950639414477 37.0 34.0 40.0 28.0 40.0 43 34.78464337339288 36.0 34.0 40.0 28.0 40.0 44 35.00198272700971 36.0 34.0 40.0 28.0 40.0 45 35.04439150876318 36.0 34.0 40.0 29.0 40.0 46 34.91679956585961 36.0 34.0 40.0 29.0 40.0 47 34.559693486423036 35.0 34.0 39.0 28.0 40.0 48 34.4336353100851 35.0 34.0 39.0 27.0 40.0 49 34.315968444183156 35.0 34.0 39.0 27.0 40.0 50 33.8223021100596 35.0 33.0 39.0 26.0 40.0 51 33.8386913456881 35.0 33.0 38.0 26.0 40.0 52 33.44892611821935 35.0 33.0 37.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 2.0 14 5.0 15 15.0 16 52.0 17 142.0 18 369.0 19 765.0 20 1333.0 21 2152.0 22 3351.0 23 5039.0 24 7218.0 25 10103.0 26 13716.0 27 18530.0 28 23311.0 29 27393.0 30 32690.0 31 41059.0 32 55680.0 33 80714.0 34 120881.0 35 172968.0 36 253244.0 37 387047.0 38 414613.0 39 162954.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.48244232302159 0.3478353731792992 0.11774314558904538 0.05197915821006445 8 98.94521538386935 0.8126510950766365 0.10047124500981013 0.1416622760442008 9 94.59089841670612 3.1985707366056957 1.045685539169347 1.1648453075188343 10 53.02577000257717 30.61545175827403 6.427162978634604 9.931615260514201 11 33.05961638945357 23.23773490738284 20.61169770795886 23.090950995204732 12 27.284699221020936 17.518501910533736 30.510730644982893 24.68606822346243 13 23.123315376731753 17.39743515000673 32.32297255402373 27.156276919237794 14 24.963562828036707 18.648694445912525 29.742921108823328 26.64482161722744 15 23.838437443301036 19.070521115579528 29.32855895139404 27.7624824897254 16 28.042973796292912 26.709060010864405 23.28066947412239 21.967296718720288 17 31.01646497046069 18.17892054435364 23.97644919146256 26.82816529372311 18 30.86597604490912 19.26171070274841 23.26100021194856 26.61131304039391 19 30.37849435884471 19.45878472292221 22.093703057344342 28.069017860888735 20 28.837099824502232 21.213435468201993 23.03679241736322 26.912672289932555 21 30.938986602562668 18.938720713367633 25.54203528371412 24.580257400355574 22 31.989194437467273 18.795914242016924 22.27448591577306 26.940405404742744 23 29.83282216862061 20.82811407736177 22.65800928541734 26.681054468600284 24 30.243533798167217 19.43551941835649 23.04916062377169 27.271786159704604 25 28.11162551468357 18.693971888755883 23.710668967407326 29.483733629153225 26 29.025401680659446 18.65844734876326 23.02878305021764 29.287367920359646 27 29.123584535056235 17.30170414269532 23.527488747384016 30.047222574864424 28 29.63574814844681 19.676290802140844 22.56505703813603 28.12290401127632 29 30.505173124922695 19.952804667880965 22.12644883730687 27.41557336988947 30 30.427912698987825 20.604832536119794 21.44854036094458 27.518714403947804 31 32.86118023201012 20.734344547718667 20.005110739035747 26.39936448123547 32 33.95432263365427 19.942016540705293 21.835060432582107 24.268600393058332 33 32.669772702878085 19.703424576552386 22.116260050529842 25.510542670039683 34 30.15079949284905 22.600854005582583 23.69868215943435 23.54966434213401 35 30.690859677522177 23.317719607857025 23.542690199313373 22.448730515307428 36 31.960861982258436 23.39863056167458 20.365150862151165 24.275356593915824 37 32.05032715812943 24.16496898958292 20.62401142887655 23.16069242341111 38 32.87910595847879 22.948961806215813 20.252910751131527 23.91902148417387 39 31.182318804413978 22.564948067154457 20.928530836880793 25.324202291550773 40 29.482262520901998 23.284211031023496 22.275412169116425 24.958114278958085 41 27.720692118292362 22.738756782762533 21.987129437366477 27.553421661578632 42 27.557834986332313 21.880882730333326 23.636950098373553 26.924332184960807 43 26.00979322211392 21.08446831151099 25.116285658710513 27.78945280766458 44 26.698380854670305 20.57175984321255 25.071662041756593 27.658197260360552 45 27.269061885165293 21.702660689971566 24.21596740895883 26.812310015904316 46 27.84023328507735 21.8754341812547 22.83535955792652 27.448972975741427 47 28.32962196331928 22.22474066268523 23.25391709814635 26.191720275849146 48 28.565271710969725 23.021373023470716 23.79403176831026 24.6193234972493 49 27.90354542537095 22.63501640830555 24.004073335291178 25.45736483103232 50 25.725760358645296 24.081170304753698 23.378743357537605 26.8143259790634 51 26.18954085621769 24.839008996099384 22.789591745666087 26.181858402016832 52 28.45003489795685 23.52972265250625 22.813292934158095 25.206949515378803 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 11.0 4 22.0 5 120.5 6 219.0 7 282.0 8 345.0 9 1715.5 10 3086.0 11 2833.0 12 2580.0 13 2624.0 14 2549.0 15 2430.0 16 2497.0 17 2564.0 18 3343.5 19 4123.0 20 4347.0 21 4571.0 22 5702.0 23 6833.0 24 7112.0 25 7391.0 26 9607.5 27 11824.0 28 14297.0 29 16770.0 30 18362.5 31 19955.0 32 19477.5 33 19000.0 34 21560.0 35 24120.0 36 25072.0 37 26024.0 38 27356.0 39 31534.5 40 34381.0 41 37453.5 42 40526.0 43 42855.5 44 45185.0 45 44036.5 46 42888.0 47 45659.5 48 48431.0 49 58431.0 50 68431.0 51 81485.5 52 94540.0 53 104576.0 54 114612.0 55 135504.0 56 156396.0 57 175112.0 58 193828.0 59 181023.5 60 168219.0 61 170063.5 62 171908.0 63 153018.0 64 124089.5 65 114051.0 66 92025.0 67 69999.0 68 62933.5 69 55868.0 70 47821.0 71 39774.0 72 37996.0 73 36218.0 74 26160.0 75 16102.0 76 10157.5 77 4213.0 78 2756.5 79 1300.0 80 1161.5 81 1023.0 82 542.0 83 61.0 84 48.0 85 35.0 86 23.5 87 12.0 88 8.5 89 3.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1835351.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.855021788713454 #Duplication Level Percentage of deduplicated Percentage of total 1 71.97747436411359 7.81317052519017 2 9.835554167017666 2.135303095740963 3 4.275414705075548 1.3922915933814293 4 2.3552472027003697 1.0226503881247568 5 1.405959355081803 0.7630859716729244 6 0.903875628524573 0.5886953785152785 7 0.6126402916983058 0.46551566005202133 8 0.4478394502510348 0.388904559225635 9 0.34041941500715883 0.3325734150483417 >10 3.53545799120214 9.380054401903555 >50 2.068786651278646 16.449282441165746 >100 2.101320224003049 41.158805150365225 >500 0.09121019495949094 6.76583703075594 >1k 0.045314619151849 8.976320310203192 >5k 0.0034857399347576153 2.3675100786548184 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACTTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 7599 0.41403524448457 No Hit TACTTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 7122 0.3880456653795378 No Hit TACTTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6943 0.3782927625288024 No Hit TACTTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5516 0.3005419671768506 No Hit TACTTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5325 0.29013523843668054 No Hit TACTTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 5037 0.274443417090246 No Hit TACTTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4916 0.267850672705112 No Hit TACTTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4803 0.2616938122462679 No Hit TACTTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4589 0.25003391721801443 No Hit TACTTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3343 0.1821449956983705 No Hit TACTTCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3342 0.18209051020758427 No Hit TACTTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3196 0.17413562855279455 No Hit TACTTCGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 3085 0.16808773907552288 No Hit TACTTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3036 0.16541795002699755 No Hit TACTTCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTACTTCGGGAAG 2976 0.1621488205798237 No Hit TACTTCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 2896 0.1577899813169252 No Hit TACTTCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 2842 0.15484776481446874 No Hit TACTTCGGGATTCAAATGACTGGAGATCTGGGAGATTTTTGGAGTGCTTCCA 2592 0.14122639211791096 No Hit TACTTCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2539 0.1383386611062407 No Hit TACTTCGGGGGGGGCTGGTGAGATGGCTCAGCGGTTAGGAGCGCCGACTGCT 2343 0.12765950491213943 No Hit TACTTCGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGT 2305 0.12558905626226263 No Hit TACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2232 0.12161161543486776 No Hit TACTTCGGGATTCTATGAAAGTTGAGTTAAATGATAGCTAAAATATCTGTTT 2153 0.11730726166275553 No Hit TACTTCGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 2117 0.11534578399445121 No Hit TACTTCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2109 0.11490990006816135 No Hit TACTTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2079 0.11327533534457443 No Hit TACTTCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 2039 0.11109591571312517 No Hit TACTTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1989 0.10837164117381362 No Hit TACTTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1986 0.10820818470145493 No Hit TACTTCGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACTCG 1985 0.10815369921066868 No Hit TACTTCGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACG 1901 0.10357691798462529 No Hit TACTTCGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 1844 0.10047124500981013 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.6345647235869323E-4 0.0 0.0 0.0 0.0 8 0.002070448649876781 0.0 0.0 0.0 0.0 9 0.0036505278826774825 0.0 0.0 0.0 0.0 10 0.019560291192256957 0.0 0.0 0.0 0.0 11 0.03465277214004297 0.0 0.0 0.0 0.0 12 0.04625818167751019 0.0 0.0 0.0 0.0 13 0.05737322179790133 0.0 0.0 0.0 0.0 14 0.07813219378745537 0.0 0.0 0.0 0.0 15 0.09780145596128478 0.0 0.0 0.0 0.0 16 0.12030396365599823 0.0 0.0 0.0 0.0 17 0.13403430733412847 0.0 0.0 0.0 0.0 18 0.14645699923338915 0.0 0.0 0.0 0.0 19 0.15909763309579475 0.0 0.0 0.0 0.0 20 0.1754432803316641 0.0 0.0 0.0 0.0 21 0.18901016753743563 0.0 0.0 0.0 0.0 22 0.20268602572477962 0.0 0.0 0.0 0.0 23 0.21478180467932292 0.0 0.0 0.0 0.0 24 0.2285666338482394 0.0 0.0 0.0 0.0 25 0.24186109360007976 0.0 0.0 0.0 0.0 26 0.2568446035662933 0.0 0.0 0.0 0.0 27 0.27422547512710105 0.0 0.0 0.0 0.0 28 0.30201307542807887 0.0 0.0 0.0 0.0 29 0.3141088543826222 0.0 0.0 0.0 0.0 30 0.3267494882450278 0.0 0.0 0.0 0.0 31 0.33966254956136455 0.0 0.0 0.0 0.0 32 0.35181281400669406 0.0 0.0 0.0 0.0 33 0.36309131059944394 0.0 0.0 0.0 0.0 34 0.37894658841823714 0.0 0.0 0.0 0.0 35 0.41768577236724747 0.0 0.0 0.0 0.0 36 0.43217891291638494 0.0 0.0 0.0 0.0 37 0.444928517760363 0.0 0.0 0.0 5.4485490786231084E-5 38 0.4589312888924244 0.0 0.0 0.0 5.4485490786231084E-5 39 0.47326097296920316 0.0 0.0 0.0 5.4485490786231084E-5 40 0.4873182295920508 0.0 0.0 0.0 5.4485490786231084E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTTA 40 5.6152203E-9 46.000004 19 ACACGCG 20 6.3124433E-4 46.000004 12 CGTCTAT 20 6.3124433E-4 46.000004 23 GATCAAT 20 6.3124433E-4 46.000004 13 TAACGCC 20 6.3124433E-4 46.000004 20 CGTTAAC 20 6.3124433E-4 46.000004 43 CCGTATA 20 6.3124433E-4 46.000004 17 CCGTACT 20 6.3124433E-4 46.000004 19 CGTAGGG 20 6.3124433E-4 46.000004 14 GTACTAG 20 6.3124433E-4 46.000004 33 CATACGT 20 6.3124433E-4 46.000004 31 CTACCGA 20 6.3124433E-4 46.000004 13 TCATACG 20 6.3124433E-4 46.000004 30 CAATCGC 20 6.3124433E-4 46.000004 32 ACGACAC 20 6.3124433E-4 46.000004 26 CAAACCG 45 3.110472E-10 46.0 13 TTTACGC 60 0.0 46.0 13 GCGAATA 25 3.4179597E-5 46.0 29 TTTCGAA 30 1.8620158E-6 46.0 27 GACCGTA 25 3.4179597E-5 46.0 32 >>END_MODULE