##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527196_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1782154 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.491965901936645 34.0 31.0 34.0 31.0 34.0 2 32.842882826063295 34.0 31.0 34.0 31.0 34.0 3 32.97017822253296 34.0 31.0 34.0 31.0 34.0 4 36.40701757536105 37.0 37.0 37.0 35.0 37.0 5 36.44681548283706 37.0 37.0 37.0 35.0 37.0 6 36.28049091155983 37.0 37.0 37.0 35.0 37.0 7 36.51375021462792 37.0 37.0 37.0 35.0 37.0 8 36.63371627816676 37.0 37.0 37.0 35.0 37.0 9 38.58005424895941 39.0 39.0 39.0 38.0 39.0 10 38.045773260896645 39.0 38.0 39.0 37.0 39.0 11 37.71572602592144 39.0 38.0 39.0 35.0 39.0 12 37.39685347057549 39.0 37.0 39.0 35.0 39.0 13 37.26220910201924 39.0 37.0 39.0 34.0 39.0 14 38.12367393614693 40.0 38.0 40.0 34.0 40.0 15 38.19110357466302 40.0 38.0 40.0 34.0 40.0 16 38.257313341046846 40.0 38.0 40.0 35.0 40.0 17 38.237229779244664 40.0 38.0 40.0 35.0 40.0 18 38.211326293911746 40.0 38.0 40.0 34.0 40.0 19 38.12767359049779 40.0 38.0 40.0 34.0 40.0 20 38.1002904350578 40.0 38.0 40.0 34.0 40.0 21 33.777958021585114 40.0 34.0 40.0 10.0 40.0 22 34.50331677284903 40.0 34.0 40.0 16.0 40.0 23 36.52145325263698 40.0 34.0 40.0 30.0 40.0 24 37.28958215732198 39.0 36.0 40.0 32.0 40.0 25 37.526565605441505 39.0 37.0 40.0 33.0 40.0 26 37.58919823988275 40.0 37.0 40.0 33.0 40.0 27 37.547593530076526 40.0 37.0 40.0 33.0 40.0 28 37.42826321406567 40.0 36.0 40.0 33.0 40.0 29 37.37322083276754 40.0 36.0 40.0 33.0 40.0 30 37.239024798081424 40.0 36.0 40.0 33.0 40.0 31 37.067946989990766 40.0 35.0 40.0 32.0 40.0 32 36.963044720041026 39.0 35.0 40.0 32.0 40.0 33 36.581666904206934 39.0 35.0 40.0 31.0 40.0 34 36.42460752550004 39.0 35.0 40.0 31.0 40.0 35 36.30053912288164 39.0 35.0 40.0 31.0 40.0 36 36.09888988269252 38.0 35.0 40.0 30.0 40.0 37 35.8926153407618 38.0 35.0 40.0 30.0 40.0 38 35.759156616094906 38.0 35.0 40.0 30.0 40.0 39 35.51008835375619 38.0 34.0 40.0 29.0 40.0 40 30.671039652016603 35.0 29.0 40.0 8.0 40.0 41 31.480746893927236 35.0 28.0 40.0 12.0 40.0 42 33.17665476720867 35.0 30.0 39.0 23.0 40.0 43 33.99127965372241 35.0 33.0 39.0 26.0 40.0 44 34.6829067521662 36.0 33.0 39.0 28.0 40.0 45 34.92290060230485 36.0 34.0 40.0 29.0 40.0 46 34.88977102988855 36.0 34.0 40.0 29.0 40.0 47 34.77462553741147 35.0 34.0 39.0 29.0 40.0 48 34.55457496939097 35.0 34.0 39.0 28.0 40.0 49 34.37868837373201 35.0 34.0 39.0 28.0 40.0 50 34.26134049021577 35.0 34.0 39.0 28.0 40.0 51 34.03116453460251 35.0 34.0 39.0 27.0 40.0 52 33.581587225346404 35.0 33.0 37.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 3.0 14 7.0 15 14.0 16 66.0 17 188.0 18 420.0 19 801.0 20 1444.0 21 2358.0 22 3541.0 23 5270.0 24 7545.0 25 10621.0 26 14115.0 27 18764.0 28 24129.0 29 28636.0 30 35158.0 31 45895.0 32 64033.0 33 84197.0 34 140366.0 35 192118.0 36 235758.0 37 299064.0 38 401743.0 39 165896.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.50161433860374 0.3422824290156743 0.10930592979057926 0.046797302590011865 8 98.96535316252131 0.8115460280088029 0.08725396346219237 0.1358468460076963 9 94.47578604318146 3.2290699905844273 1.0893559142475904 1.2057880519865287 10 53.01264649407402 30.597860790930525 6.467791223429625 9.921701491565823 11 33.207792368111846 23.261962770894097 20.489867878982402 23.040376982011658 12 27.35145223140088 17.551345169946032 30.4741341096224 24.62306848903069 13 23.295686006933185 17.377847256746612 32.25400274050391 27.0724639958163 14 24.932413248237808 18.687778946151678 29.786931993531425 26.592875812079093 15 23.871281606415607 19.008289968207013 29.26784105077339 27.852587374603992 16 29.382477608556833 18.58301807812344 26.490303307121604 25.54420100619812 17 30.98396659323493 18.225473219486084 24.02912430687808 26.761435880400906 18 30.919830721699697 19.301250060320264 23.175494373662435 26.60342484431761 19 30.371561604664915 19.48512867013737 22.021722028511565 28.121587696686145 20 28.8191143975212 21.28222364621688 22.92557208860738 26.973089867654537 21 35.254472958004754 18.561078335542273 24.211992902970223 21.972455803482752 22 32.0885288252306 18.75578653696594 22.285952841336947 26.869731796466525 23 29.77335292011801 20.865536872795502 22.601413794767456 26.759696412319023 24 30.31213913051285 19.42228337169515 23.083975907805947 27.181601589986048 25 28.219502916134072 18.610288448697474 23.73027246803587 29.43993616713258 26 29.03604290089409 18.62611199705525 23.052721594205664 29.285123507845 27 29.15516840856626 17.310849679657313 23.538874867155137 29.99510704462128 28 29.598003315089493 19.71142785640298 22.57683679412666 28.113732034380867 29 30.38732904114908 19.974087536767303 22.186803160669616 27.451780261414 30 30.46975738348089 20.532007896062854 21.463857781089626 27.534376939366634 31 32.90899664114325 20.73788236033474 20.023578209290555 26.329542789231457 32 33.980284532088696 19.91146668581952 21.92997911516064 24.17826966693114 33 32.62181607201173 19.709856723941925 22.19443437548046 25.47389282856588 34 30.06238518107863 22.62621524290269 23.75917008294457 23.552229493074112 35 30.639888584263765 23.37687988804559 23.51699123644758 22.46624029124307 36 31.99532700316583 23.412398704040164 20.388473723370705 24.203800569423294 37 31.934052837184666 24.17759632444783 20.6576984929473 23.230652345420204 38 32.849405831370355 23.006485410351743 20.226254296766722 23.917854461511183 39 30.9752131409519 22.588788623205403 20.92838217123773 25.507616064604967 40 29.653722405583355 27.631169921342373 20.538629097148732 22.176478575925536 41 27.729870707020833 22.744330736849903 22.039341156824833 27.486457399304438 42 27.51793616039916 21.89664866223682 23.651996404351138 26.933418773012885 43 25.863140895792398 21.186160118598053 25.125606429074033 27.82509255653552 44 26.600226467521885 20.59973492750907 25.123866960992146 27.676171643976893 45 27.193665642812014 21.803166280804014 24.266701979739125 26.736466096644847 46 27.863360854336943 21.994227210443093 22.701854048527792 27.440557886692176 47 28.107615840157475 22.258794694510126 23.240640258922628 26.39294920640977 48 28.443389291834485 23.136216062136043 23.822576500122885 24.597818145906583 49 27.772459619090156 22.834390293992552 23.996130525195912 25.39701956172138 50 25.669442708093687 24.134334069895193 23.464470522749437 26.73175269926168 51 26.186906406517057 24.894649957298864 22.76290376701452 26.15553986916955 52 28.42846353345446 23.612998652192797 22.822606800534633 25.13593101381811 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 9.0 4 18.0 5 116.0 6 214.0 7 269.0 8 324.0 9 1547.0 10 2770.0 11 2626.0 12 2482.0 13 2588.0 14 2520.5 15 2347.0 16 2392.0 17 2437.0 18 3163.5 19 3890.0 20 4041.0 21 4192.0 22 5353.5 23 6515.0 24 6785.5 25 7056.0 26 9205.5 27 11355.0 28 13699.0 29 16043.0 30 17535.5 31 19028.0 32 18907.0 33 18786.0 34 21099.5 35 23413.0 36 24340.0 37 25267.0 38 26534.5 39 30712.5 40 33623.0 41 36297.5 42 38972.0 43 41498.5 44 44025.0 45 43224.0 46 42423.0 47 44873.0 48 47323.0 49 56450.5 50 65578.0 51 78649.5 52 91721.0 53 100525.0 54 109329.0 55 129741.0 56 150153.0 57 169769.5 58 189386.0 59 176141.5 60 162897.0 61 165245.0 62 167593.0 63 149108.5 64 120982.5 65 111341.0 66 89742.5 67 68144.0 68 61731.0 69 55318.0 70 46718.5 71 38119.0 72 37049.0 73 35979.0 74 26183.0 75 16387.0 76 10345.0 77 4303.0 78 2759.5 79 1216.0 80 1088.0 81 960.0 82 521.0 83 82.0 84 45.5 85 9.0 86 8.0 87 7.0 88 6.5 89 4.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1782154.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.151789093800222 #Duplication Level Percentage of deduplicated Percentage of total 1 72.55188334459469 8.09083301416917 2 9.543499000522067 2.128541761414306 3 4.135168694992072 1.383435874615101 4 2.314507167182498 1.0324358313803292 5 1.387140362849651 0.7734548384998412 6 0.8943010976528365 0.5983834336427082 7 0.594329933874676 0.46394894522918334 8 0.46089473727351715 0.4111840723613382 9 0.3390193951816671 0.3402605514396297 >10 3.5355072848394284 9.745273172691931 >50 2.0851943202356726 16.954022834222172 >100 2.0259191650586943 40.382350621347534 >500 0.08509799505605756 6.442235470306397 >1k 0.044016204339340115 8.824736235553456 >5k 0.0035212963471472087 2.4289033431269087 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACTTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 7546 0.4234201982544718 No Hit TACTTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 7117 0.3993482044761564 No Hit TACTTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6618 0.37134837954520206 No Hit TACTTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 5410 0.30356523622537673 No Hit TACTTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5376 0.3016574325226664 No Hit TACTTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5045 0.2830844023580454 No Hit TACTTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4883 0.27399427883336686 No Hit TACTTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4705 0.26400636533094224 No Hit TACTTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4634 0.2600224223046942 No Hit TACTTCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3430 0.1924637264793054 No Hit TACTTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3380 0.18965813279884905 No Hit TACTTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3311 0.18578641351981928 No Hit TACTTCGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 3130 0.17563016439656728 No Hit TACTTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3036 0.17035564827730937 No Hit TACTTCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTACTTCGGGAAG 2973 0.16682060023993436 No Hit TACTTCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 2659 0.14920147192666852 No Hit TACTTCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 2560 0.14364639643936494 No Hit TACTTCGGGGGGGGCTGGTGAGATGGCTCAGCGGTTAGGAGCGCCGACTGCT 2392 0.13421960167303162 No Hit TACTTCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2375 0.13326569982167646 No Hit TACTTCGGGATTCAAATGACTGGAGATCTGGGAGATTTTTGGAGTGCTTCCA 2318 0.13006732302595622 No Hit TACTTCGGGATTCTATGAAAGTTGAGTTAAATGATAGCTAAAATATCTGTTT 2186 0.12266055570955146 No Hit TACTTCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 2095 0.11755437521112093 No Hit TACTTCGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGT 2087 0.11710548022224791 No Hit TACTTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2050 0.11502934089871021 No Hit TACTTCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2048 0.11491711715149194 No Hit TACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1982 0.11121373349328958 No Hit TACTTCGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACTCG 1953 0.1095864891586249 No Hit TACTTCGGGCTCTTCCGGTCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACG 1919 0.10767868545591458 No Hit TACTTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1908 0.1070614548462142 No Hit TACTTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1892 0.10616366486846816 No Hit TACTTCGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 1860 0.1043680849129761 No Hit TACTTCGGAGAATTTTTTTAACTCTAGCACAAAGCTCTTGCTCATGAAATTC 1848 0.10369474242966659 No Hit TACTTCGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 1798 0.10088914874921023 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.683356208273808E-4 0.0 0.0 0.0 0.0 8 0.0014589087138373003 0.0 0.0 0.0 0.0 9 0.0023005868179742043 0.0 0.0 0.0 0.0 10 0.019470820142367045 0.0 0.0 0.0 0.0 11 0.035518815994577346 0.0 0.0 0.0 0.0 12 0.049154001281595194 0.0 0.0 0.0 0.0 13 0.06071304724507534 0.0 0.0 0.0 0.0 14 0.0797910842721785 0.0 0.0 0.0 0.0 15 0.09898134504649991 0.0 0.0 0.0 0.0 16 0.11789104645277569 0.0 0.0 0.0 0.0 17 0.1306284417620475 0.0 0.0 0.0 0.0 18 0.14201915210470026 0.0 0.0 0.0 0.0 19 0.15531766615006334 0.0 0.0 0.0 0.0 20 0.16923341080512683 0.0 0.0 0.0 0.0 21 0.18124135175748 0.0 0.0 0.0 0.0 22 0.19554987952780736 0.0 0.0 0.0 0.0 23 0.2087361698259522 0.0 0.0 0.0 0.0 24 0.22411082319485298 0.0 0.0 0.0 0.0 25 0.23712877787217043 0.0 0.0 0.0 0.0 26 0.2531206618507716 0.0 0.0 0.0 0.0 27 0.2713009089001287 0.0 0.0 0.0 0.0 28 0.29694403513949974 0.0 0.0 0.0 0.0 29 0.30827863360854335 0.0 0.0 0.0 0.0 30 0.3204549101817239 0.0 0.0 0.0 0.0 31 0.33201395614520407 0.0 0.0 0.0 0.0 32 0.34463912770725763 0.0 0.0 0.0 0.0 33 0.35372925123193616 0.0 0.0 0.0 0.0 34 0.369103904600837 0.0 0.0 0.0 0.0 35 0.40451049684819607 0.0 0.0 0.0 0.0 36 0.4179773465143865 0.0 0.0 0.0 0.0 37 0.4304341824556127 0.0 0.0 0.0 5.611187360912693E-5 38 0.4444621508578944 0.0 0.0 0.0 5.611187360912693E-5 39 0.4574801055352119 0.0 0.0 0.0 5.611187360912693E-5 40 0.4729108707777218 0.0 0.0 0.0 5.611187360912693E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTTA 50 1.6370905E-11 46.0 19 CAAACGT 25 3.4179193E-5 46.0 44 TAACGGG 20 6.3123956E-4 46.0 45 CGTTATA 30 1.8619849E-6 46.0 46 CCGTACT 20 6.3123956E-4 46.0 19 TATTACG 20 6.3123956E-4 46.0 30 ACGTCGT 50 1.6370905E-11 46.0 44 TTACGTA 20 6.3123956E-4 46.0 32 ACCGTAT 20 6.3123956E-4 46.0 19 AATAGAC 55 1.8189894E-12 46.0 26 TGTACGA 25 3.4179193E-5 46.0 35 ACATACG 25 3.4179193E-5 46.0 38 CGCCCAA 25 3.4179193E-5 46.0 15 CCCGAAA 30 1.8619849E-6 46.0 18 AACGTCT 35 1.0199983E-7 45.999996 39 TAGCTAA 285 0.0 44.385967 35 TACGTCA 210 0.0 43.809525 25 CGGGACT 4195 0.0 43.697258 6 CCTAATA 150 0.0 42.933334 13 GTATATC 75 0.0 42.933334 34 >>END_MODULE