##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527194_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2029392 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42669479331741 33.0 31.0 34.0 31.0 34.0 2 32.880542053974786 34.0 31.0 34.0 31.0 34.0 3 32.95246113121566 34.0 31.0 34.0 31.0 34.0 4 36.438421458249564 37.0 37.0 37.0 35.0 37.0 5 36.295706792970506 37.0 37.0 37.0 35.0 37.0 6 36.33655400238101 37.0 37.0 37.0 35.0 37.0 7 36.44978200367401 37.0 36.0 37.0 35.0 37.0 8 36.601471770855504 37.0 37.0 37.0 35.0 37.0 9 38.72442780892011 39.0 39.0 39.0 39.0 39.0 10 38.210063900912196 39.0 39.0 39.0 37.0 39.0 11 37.91983805987212 39.0 38.0 39.0 35.0 39.0 12 37.6221799435496 39.0 37.0 39.0 35.0 39.0 13 37.57270157761536 39.0 37.0 39.0 35.0 39.0 14 38.42395850579878 40.0 38.0 40.0 35.0 40.0 15 38.33537187492609 40.0 38.0 40.0 35.0 40.0 16 33.25356954201061 40.0 35.0 40.0 3.0 40.0 17 35.01109297760117 40.0 35.0 40.0 17.0 40.0 18 37.1147466827503 40.0 35.0 40.0 32.0 40.0 19 37.95489831437199 40.0 37.0 40.0 34.0 40.0 20 38.185518125625805 40.0 38.0 40.0 34.0 40.0 21 38.360578439256685 40.0 38.0 40.0 35.0 40.0 22 38.37575096383547 40.0 38.0 40.0 35.0 40.0 23 38.34553600290136 40.0 38.0 40.0 35.0 40.0 24 38.296034477321285 40.0 38.0 40.0 35.0 40.0 25 38.26130141441377 40.0 38.0 40.0 35.0 40.0 26 38.16846030732357 40.0 38.0 40.0 35.0 40.0 27 38.05391959759376 40.0 38.0 40.0 34.0 40.0 28 37.91809468057428 40.0 38.0 40.0 34.0 40.0 29 37.72962394648249 40.0 38.0 40.0 33.0 40.0 30 37.758914492616505 40.0 37.0 40.0 34.0 40.0 31 37.692349728391555 40.0 37.0 40.0 33.0 40.0 32 37.61336597365122 40.0 37.0 40.0 33.0 40.0 33 37.28392050426926 40.0 37.0 40.0 33.0 40.0 34 37.230677956747634 40.0 36.0 40.0 33.0 40.0 35 37.174531091085406 39.0 36.0 40.0 32.0 40.0 36 37.1150305116015 39.0 36.0 40.0 32.0 40.0 37 36.75875779543824 39.0 35.0 40.0 31.0 40.0 38 36.73896861720161 39.0 35.0 40.0 31.0 40.0 39 36.36541781972137 39.0 35.0 40.0 31.0 40.0 40 36.32685060353052 39.0 35.0 40.0 30.0 40.0 41 36.294870089169564 38.0 35.0 40.0 31.0 40.0 42 36.21131747833834 38.0 35.0 40.0 30.0 40.0 43 36.08662939441961 38.0 35.0 40.0 30.0 40.0 44 36.38049277813256 39.0 35.0 40.0 31.0 40.0 45 36.423965897175115 39.0 35.0 40.0 31.0 40.0 46 36.33592080780845 38.0 35.0 40.0 31.0 40.0 47 36.022376159953325 38.0 35.0 40.0 31.0 40.0 48 35.942220132926515 38.0 35.0 40.0 31.0 40.0 49 35.82806229649077 37.0 35.0 40.0 30.0 40.0 50 35.33361322011716 37.0 34.0 40.0 29.0 40.0 51 35.390309018661746 37.0 34.0 40.0 29.0 40.0 52 35.033399658616965 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 6.0 16 24.0 17 73.0 18 191.0 19 345.0 20 609.0 21 1153.0 22 1907.0 23 2732.0 24 4348.0 25 6487.0 26 8924.0 27 11990.0 28 16140.0 29 21555.0 30 28203.0 31 37321.0 32 51206.0 33 73601.0 34 107276.0 35 152328.0 36 233317.0 37 408927.0 38 566929.0 39 293799.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.78510805206683 0.18276409880397676 0.01177692629122417 0.020350922837973146 8 99.096330329478 0.8200485662700947 0.04464391305376191 0.038977191198151954 9 98.58593115573532 0.7198215031891325 0.2707214771714878 0.4235258639040658 10 58.999394892657506 29.972523790376627 3.7945355062008717 7.233545810764998 11 31.306864321924987 24.15792513225636 21.743261035817625 22.791949510001025 12 25.448163785015414 17.57955091968432 30.44675449592785 26.525530799372422 13 22.1794015153307 17.723682758185703 31.920545660966436 28.17637006551716 14 23.419773015760388 19.029147646191568 31.413497244494902 26.137582093553142 15 23.47540544162981 18.928674203899494 30.637846212067455 26.958074142403245 16 26.91121281644946 27.34360833195361 23.151170399804474 22.594008451792458 17 30.05944637605746 18.50652806357766 22.901440431419854 28.532585128945026 18 28.214854498293086 19.548120816480996 23.99368875012812 28.243335935097804 19 27.849178473158464 19.74512563368733 23.323241640846128 29.082454252308082 20 27.14024693110055 19.742464738207303 23.872618005786954 29.244670324905194 21 29.0649120524768 19.139870463665964 25.762149451658427 26.03306803219881 22 30.008199500145853 18.94069750940183 23.79175634869951 27.259346641752803 23 28.68445327467537 20.302435409226014 24.650190796061086 26.36292052003753 24 27.42092212840102 19.946318897482595 23.995807611343693 28.636951362772695 25 27.391997209016296 21.03107728817301 22.843492040965966 28.733433461844733 26 28.894811845124057 19.651600085148655 22.633182746359502 28.820405323367787 27 28.23707790313552 18.8568300259388 23.446480522245086 29.45961154868059 28 29.23304122614064 18.920297310721633 23.392572750853457 28.45408871228427 29 29.442167900533754 20.69945087001427 22.720844469673676 27.137536759778296 30 28.605020617012382 20.075520155790503 22.332304453747724 28.987154773449387 31 29.397031229057767 21.238282204719443 21.851273681969772 27.513412884253018 32 31.23038821479537 20.773512460874983 22.5615356717677 25.43456365256195 33 31.62075143688356 20.211964962905146 22.202265506122032 25.965018094089267 34 29.14932157020428 22.275144476769395 24.36611556564725 24.209418387379078 35 29.582653326710663 22.0740990405008 24.76658033539109 23.576667297397446 36 31.128633600605504 21.40335627616547 22.10790226826557 25.36010785496346 37 30.38653941673171 23.411494674266972 21.765188785606725 24.43677712339459 38 31.10153188738302 22.03497402177598 22.509648209907205 24.353845880933797 39 29.49765249887651 20.908331165196277 22.390647050939393 27.203369284987822 40 28.77255848056955 22.717493712402533 22.151462112790433 26.358485694237487 41 27.04085755733737 22.634611745783957 23.53502921071927 26.789501486159402 42 27.202728699038925 20.554924824775107 24.2800306692842 27.96231580690177 43 27.265358294503972 19.80233488650788 26.339908701719526 26.592398117268623 44 27.343509780269166 20.827223128897717 25.30073046508511 26.528536625748007 45 27.555740832722314 20.09680731963071 24.473290522481612 27.87416132516537 46 27.63635611059864 20.53856524515717 24.457472977128127 27.367605667116063 47 28.29211901889827 21.130417386093963 24.758991855688798 25.818471739318973 48 29.278079345932177 21.190041155183426 23.324572088586137 26.20730741029826 49 27.55820462483345 21.560841867909204 25.22597901243328 25.654974494824067 50 25.378487744112523 23.15732988008231 24.72154221559955 26.742640160205617 51 25.996505357269566 22.34501762104118 24.10175067212249 27.55672634956677 52 28.13517546141899 23.229716092307452 23.167628531106853 25.467479915166706 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 39.5 6 78.0 7 678.5 8 1279.0 9 1198.5 10 1118.0 11 1714.5 12 2311.0 13 2236.0 14 2648.0 15 3135.0 16 3511.0 17 3887.0 18 3530.0 19 3173.0 20 4071.5 21 4970.0 22 6495.5 23 8021.0 24 8425.5 25 8830.0 26 10639.5 27 12449.0 28 14292.0 29 16135.0 30 19745.0 31 23355.0 32 24994.0 33 26633.0 34 29995.5 35 33358.0 36 34494.5 37 35631.0 38 37751.0 39 42148.0 40 44425.0 41 51706.5 42 58988.0 43 66969.5 44 74951.0 45 76402.0 46 77853.0 47 83763.5 48 89674.0 49 99808.0 50 109942.0 51 125128.0 52 140314.0 53 154160.0 54 168006.0 55 188930.0 56 209854.0 57 192350.5 58 174847.0 59 168935.5 60 163024.0 61 150892.0 62 138760.0 63 122482.0 64 89871.5 65 73539.0 66 66276.0 67 59013.0 68 53129.0 69 47245.0 70 41714.0 71 36183.0 72 27348.5 73 18514.0 74 12681.0 75 6848.0 76 4975.5 77 3103.0 78 2213.0 79 1323.0 80 793.0 81 263.0 82 184.5 83 106.0 84 56.5 85 7.0 86 6.0 87 5.0 88 3.5 89 2.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2029392.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.778667893294589 #Duplication Level Percentage of deduplicated Percentage of total 1 70.12067104514804 6.155660835603127 2 9.93492834927555 1.7443087304393496 3 4.146729991654817 1.0920829631970563 4 2.131258891169049 0.7483845600081743 5 1.2753905346944796 0.5598114969167124 6 0.7625016963893615 0.4016249496405568 7 0.5072513428411646 0.3117093754061209 8 0.3577845779038619 0.2512697589408472 9 0.29596498373141117 0.2338360470200155 >10 4.424676578496996 10.81272977161156 >50 3.3077152497120323 21.053143621655167 >100 2.558896028465749 40.0054440865039 >500 0.11813268748971543 6.938358673574455 >1k 0.05551590778205207 8.226961191448359 >5k 0.0019366014342576305 0.8919743010394157 >10k+ 6.455338114192101E-4 0.5726996369951929 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACAATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 10106 0.4979816615025584 No Hit ACAATAGGGGCTCTTTGGCCTCGCCGGTAGAAGCAAGATGACGAAGGGAACG 5352 0.26372430757586507 No Hit ACAATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5334 0.26283734241585655 No Hit ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5054 0.2490401065935019 No Hit ACAATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4389 0.21627167151540955 No Hit ACAATAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4270 0.21040784629090878 No Hit ACAATAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3997 0.196955541364113 No Hit ACAATAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3812 0.18783951055291437 No Hit ACAATAGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 3024 0.1490101468814305 No Hit ACAATAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 2949 0.14531445871472834 No Hit ACAATAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2767 0.13634625543019782 No Hit ACAATAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2639 0.13003894762569282 No Hit ACAATAGGGCAGTAGATTTCATTAAGAAAAATTGTGGACAAACTTGTTTCTG 2632 0.12969401673013395 No Hit ACAATAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2464 0.12141567523672114 No Hit ACAATAGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCC 2383 0.11742433201668283 No Hit ACAATAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 2331 0.11486198822110268 No Hit ACAATAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGA 2328 0.11471416069443459 No Hit ACAATAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2309 0.11377791969220338 No Hit ACAATAGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGATGGC 2287 0.11269385116330409 No Hit ACAATAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 2254 0.11106774836995513 No Hit ACAATAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAAA 2177 0.1072735085188076 No Hit ACAATAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2156 0.106238715832131 No Hit ACAATAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2145 0.10569668156768135 No Hit ACAATAGGGGCTTTTTCGCAACGGGTTTGCCGTCAGAACGCAGGTGTTGTGA 2055 0.10126185576763878 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.008179789808967415 0.0 0.0 0.0 0.0 7 0.00822906565119011 0.0 0.0 0.0 0.0 8 0.008327617335635501 0.0 0.0 0.0 0.0 9 0.008820375757862453 0.0 0.0 0.0 0.0 10 0.0135508566112412 0.0 0.0 0.0 0.0 11 0.021632094735763222 0.0 0.0 0.0 0.0 12 0.024736472795793024 0.0 0.0 0.0 0.0 13 0.029023471069167514 0.0 0.0 0.0 0.0 14 0.038090226038143445 0.0 0.0 0.0 0.0 15 0.044939568107098087 0.0 0.0 0.0 0.0 16 0.05597735676498183 0.0 0.0 0.0 0.0 17 0.06208756120059604 0.0 0.0 0.0 0.0 18 0.06844414484732374 0.0 0.0 0.0 0.0 19 0.07460362512516064 0.0 0.0 0.0 0.0 20 0.07948193350520748 0.0 0.0 0.0 0.0 21 0.08352255256746849 0.0 0.0 0.0 0.0 22 0.08982986037197348 0.0 0.0 0.0 0.0 23 0.09677775412537351 0.0 0.0 0.0 0.0 24 0.10219809676986999 0.0 0.0 0.0 0.0 25 0.10687930178102605 0.0 0.0 0.0 0.0 26 0.11289095453219486 0.0 0.0 0.0 0.0 27 0.11855767638780482 0.0 0.0 0.0 0.0 28 0.12649108698565875 0.0 0.0 0.0 0.0 29 0.1323549122101595 0.0 0.0 0.0 0.0 30 0.13782453069687867 0.0 0.0 0.0 0.0 31 0.1450188036613922 0.0 0.0 0.0 0.0 32 0.15502179963259932 0.0 0.0 0.0 0.0 33 0.16083634901487737 0.0 0.0 0.0 0.0 34 0.16739003603049582 0.0 0.0 0.0 0.0 35 0.17990609995506043 0.0 0.0 0.0 0.0 36 0.19606857620410448 0.0 0.0 0.0 0.0 37 0.20178457390193713 0.0 0.0 0.0 0.0 38 0.20799333002199674 0.0 0.0 0.0 0.0 39 0.2143991895109471 0.0 0.0 0.0 0.0 40 0.22119925573767907 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAA 45 3.110472E-10 46.0 36 CAATTCG 20 6.3126034E-4 46.0 27 TACGCTT 20 6.3126034E-4 46.0 23 CCGTAAT 20 6.3126034E-4 46.0 31 CGTAAGC 50 1.6370905E-11 46.0 38 ATAACGT 25 3.4180877E-5 46.0 31 TAAGCGT 30 1.8621122E-6 46.0 33 GCGTAAT 20 6.3126034E-4 46.0 9 GCGTAAG 45 3.110472E-10 46.0 37 GTACGTA 20 6.3126034E-4 46.0 39 TAGGGGA 32095 0.0 44.867737 5 ATAGGGG 119970 0.0 44.765358 4 CAATAGG 206495 0.0 44.70796 2 ACAATAG 208450 0.0 44.683666 1 TAGGGGT 20035 0.0 44.668327 5 AGGGATC 5320 0.0 44.65977 6 AATAGGG 203790 0.0 44.647923 3 TAGGGAT 17750 0.0 44.432114 5 ATAGGGA 61865 0.0 44.419945 4 TAGGGGG 37030 0.0 44.347828 5 >>END_MODULE