##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527189_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6436 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33654443753884 33.0 31.0 34.0 31.0 34.0 2 32.759322560596644 34.0 31.0 34.0 31.0 34.0 3 32.796923555003104 34.0 31.0 34.0 31.0 34.0 4 36.38828464885022 37.0 37.0 37.0 35.0 37.0 5 35.37709757613425 37.0 35.0 37.0 33.0 37.0 6 36.10674331883157 37.0 36.0 37.0 35.0 37.0 7 36.41267868241144 37.0 37.0 37.0 35.0 37.0 8 36.628340584213795 37.0 37.0 37.0 35.0 37.0 9 38.67262274704785 39.0 39.0 39.0 38.0 39.0 10 38.01817899316345 39.0 38.0 39.0 35.0 39.0 11 37.95929148539466 39.0 38.0 39.0 35.0 39.0 12 36.62290242386575 38.0 35.0 39.0 33.0 39.0 13 35.61295835922933 38.0 35.0 39.0 30.0 39.0 14 36.32131758856433 39.0 35.0 40.0 30.0 40.0 15 36.89900559353636 39.0 35.0 40.0 32.0 40.0 16 37.19530764449969 39.0 35.0 40.0 34.0 40.0 17 37.13502175264139 39.0 35.0 40.0 33.0 40.0 18 37.01942200124301 38.0 35.0 40.0 33.0 40.0 19 36.899627097576136 39.0 35.0 40.0 33.0 40.0 20 36.35674331883157 38.0 35.0 40.0 31.0 40.0 21 36.79754505904288 38.0 35.0 40.0 33.0 40.0 22 36.63937228091983 38.0 35.0 40.0 32.0 40.0 23 36.502796768178996 38.0 35.0 40.0 32.0 40.0 24 36.21830329397141 38.0 35.0 40.0 31.0 40.0 25 36.43551895587321 38.0 35.0 40.0 32.0 40.0 26 36.56448104412679 38.0 35.0 40.0 33.0 40.0 27 36.162989434431324 38.0 35.0 40.0 32.0 40.0 28 36.247980111870724 38.0 35.0 40.0 32.0 40.0 29 36.367930391547546 38.0 35.0 40.0 32.0 40.0 30 36.58809819763828 38.0 35.0 40.0 33.0 40.0 31 36.45633934120572 38.0 35.0 40.0 33.0 40.0 32 35.65506525792418 37.0 35.0 40.0 31.0 40.0 33 35.502796768178996 36.0 35.0 40.0 30.0 40.0 34 35.547855811062774 36.0 35.0 40.0 31.0 40.0 35 35.6530453697949 36.0 35.0 40.0 31.0 40.0 36 34.370105655686764 35.0 34.0 40.0 26.0 40.0 37 32.68753884400249 35.0 32.0 40.0 15.0 40.0 38 32.35596643878185 35.0 33.0 39.0 12.0 40.0 39 32.14745183343692 35.0 32.0 39.0 12.0 40.0 40 32.060596643878185 35.0 32.0 39.0 9.0 40.0 41 31.855655686761963 35.0 31.0 39.0 11.0 40.0 42 31.79552517091361 35.0 31.0 39.0 10.0 40.0 43 31.305313859540085 35.0 31.0 38.0 9.0 40.0 44 31.299564947172158 35.0 31.0 39.0 10.0 40.0 45 31.460689869484153 35.0 31.0 39.0 10.0 40.0 46 31.06991920447483 35.0 31.0 39.0 8.0 40.0 47 30.587787445618396 35.0 29.0 38.0 8.0 40.0 48 30.836078309509013 35.0 28.0 38.0 10.0 40.0 49 31.509322560596644 35.0 29.0 37.0 15.0 40.0 50 30.888595400870106 35.0 28.0 37.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 3.0 21 13.0 22 18.0 23 28.0 24 51.0 25 59.0 26 82.0 27 171.0 28 332.0 29 174.0 30 262.0 31 224.0 32 211.0 33 292.0 34 591.0 35 740.0 36 782.0 37 885.0 38 1110.0 39 403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 95.57178371659415 0.3418272218769422 3.962088253573648 0.1243008079552517 8 97.63828464885022 0.2952144188937228 2.0198881292728403 0.04661280298321939 9 93.7538844002486 0.5748912367930391 4.226227470478558 1.4449968924798011 10 62.0261031696706 22.85581106277191 5.62461155997514 9.493474207582349 11 43.31883157240522 26.04101926662523 13.688626476072093 16.95152268489745 12 42.728402734617774 13.688626476072093 30.080795525170913 13.502175264139215 13 14.030453697949035 38.346799254195155 22.420758234928527 25.201988812927283 14 17.743940335612184 48.3064014916097 21.566190180236173 12.383467992541952 15 16.376631448104412 15.351149782473586 46.00683654443754 22.26538222498446 16 13.067122436295836 15.211311373523928 39.791796146674955 31.929770043505286 17 20.60285891858297 27.14418893722809 19.018023617153514 33.23492852703542 18 26.646985705407083 20.400870105655684 26.10316967060286 26.848974518334366 19 28.02983219390926 19.888129272840274 38.144810441267865 13.937228091982599 20 24.02113113735239 17.588564325668116 37.18147917961467 21.208825357364823 21 38.65755127408328 23.446239900559355 10.021752641392169 27.874456183965197 22 39.698570540708516 30.60907395898073 15.055935363579865 14.636420136730887 23 38.40894965817278 32.30267246737103 9.586699813548789 19.701678060907398 24 22.032318210068365 30.127408328154132 20.059042883778744 27.781230577998755 25 18.5052827843381 38.99937849596022 20.043505282784338 22.45183343691734 26 30.065257924176507 33.421379738968305 15.149160969546301 21.364201367308887 27 24.65817277812306 34.524549409571165 16.858297078931013 23.958980733374766 28 22.54505904288378 41.702921068986946 14.931634555624612 20.820385332504664 29 12.228091982597887 42.417650714729646 25.947793660658796 19.406463642013673 30 12.461155997513984 34.400248601615914 28.154133001864512 24.984462399005594 31 25.01553760099441 30.826600372902423 26.988812927284027 17.16904909881914 32 29.909881914232443 28.34058421379739 24.083281541330017 17.66625233064015 33 28.58918582970789 20.261031696706027 33.250466128029835 17.899316345556247 34 24.502796768178996 22.14108141702921 25.233064014916096 28.1230577998757 35 24.502796768178996 21.348663766314484 25.621504039776262 28.52703542573027 36 29.443753884400248 34.58669981354879 13.84400248601616 22.125543816034803 37 18.0236171535115 24.192044748290865 29.0863890615289 28.697949036668742 38 18.241143567433188 22.23430702299565 32.67557489123679 26.848974518334366 39 20.447482908638907 29.97203231821007 18.241143567433188 31.339341205717837 40 37.958359229334995 24.95338719701678 22.840273461777503 14.247980111870728 41 29.350528278433806 20.727159726538222 29.83219390926041 20.090118085767557 42 24.30080795525171 22.90242386575513 36.653200745804845 16.143567433188316 43 25.745804847731513 23.24425108763207 16.547545059042886 34.46239900559354 44 13.502175264139215 24.813548788067123 26.476072094468616 35.208203853325045 45 33.887507768800496 22.622747047855814 19.49968924798011 23.99005593536358 46 33.82535736482287 25.093225605966442 11.295835922933499 29.785581106277192 47 23.570540708514606 32.98632691112493 16.050341827221875 27.392790553138596 48 26.49160969546302 25.279676817899315 30.391547545059044 17.83716594157862 49 20.851460534493473 27.221876942200122 26.087632069608453 25.839030453697948 50 20.323182100683653 29.894344313238037 27.392790553138596 22.389683032939715 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 7.0 12 13.0 13 11.5 14 10.0 15 10.5 16 11.0 17 84.0 18 157.0 19 113.0 20 69.0 21 55.0 22 41.0 23 31.5 24 22.0 25 43.0 26 64.0 27 62.5 28 61.0 29 115.0 30 169.0 31 109.5 32 50.0 33 39.0 34 28.0 35 109.0 36 190.0 37 136.0 38 82.0 39 62.5 40 43.0 41 49.0 42 55.0 43 70.5 44 86.0 45 223.0 46 360.0 47 284.5 48 209.0 49 198.5 50 188.0 51 275.5 52 363.0 53 899.0 54 1435.0 55 1043.5 56 652.0 57 533.5 58 415.0 59 435.5 60 456.0 61 378.0 62 300.0 63 206.5 64 113.0 65 206.0 66 299.0 67 350.0 68 401.0 69 221.0 70 41.0 71 32.0 72 23.0 73 17.0 74 11.0 75 10.5 76 10.0 77 8.0 78 6.0 79 3.0 80 0.0 81 0.0 82 0.0 83 0.5 84 1.0 85 1.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 6436.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.867619639527657 #Duplication Level Percentage of deduplicated Percentage of total 1 83.91028766455388 26.740211311373525 2 8.044856167723061 5.127408328154133 3 2.7303754266211606 2.610316967060286 4 1.4139444173573867 1.8023617153511498 5 0.8288639687957094 1.3206960845245495 6 0.29254022428083865 0.5593536357986327 7 0.19502681618722573 0.435052827843381 8 0.24378352023403219 0.6215040397762586 9 0.14627011214041932 0.41951522684897447 >10 1.023890784982935 7.411435674331883 >50 0.5363237445148707 12.678682411435673 >100 0.6338371526084837 40.27346177750155 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTGGACGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 476 7.395898073337477 No Hit TTGGACGGGGCCTGCCGGGTGAACCGCCCCGGTGCGTTCACTCCCGATAT 286 4.443753884400248 No Hit TTGGACGGGGGGAATTCCTTCGGCAACATTAACTGGTTGATGCTGAAAAA 277 4.303915475450591 No Hit TTGGACGGTCCTCGCTTAAGCTCGACAGCTCCCACATTAGATCCTCGCTC 223 3.4648850217526417 No Hit TTGGACGGGAAGCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACG 212 3.2939714108141707 No Hit TTGGACGGGGATTACCATGCAGGCGGAACACCTCGGCCAGTTGCGCGCCG 196 3.045369794903667 No Hit TTGGACGGGTGTCATTTAAAAGGTAGATAATATACAATGGGCATTTTGGA 159 2.470478558110628 No Hit TTGGACGGGAATCAGCTTGTGGCGCGATACCGTCATTATGGAGCCACTGA 151 2.346177750155376 No Hit TTGGACGGGGGTTTGCGCTTGCGGTGGATCATTGCGAAATGCCAGGGCGC 146 2.2684897451833437 No Hit TTGGACGGGGGAATTCATCTGCGTGCGAAGAGGTGGCAGCCGTCTCGTTG 133 2.06650093225606 No Hit TTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGAT 116 1.8023617153511498 No Hit TTGGACGGGCTTTTCCCTTTCTGCCACCGCCATGCCATCCAGACTGAGGA 110 1.709136109384711 No Hit TTGGACGGGATGAGAAACTCGACACTACACGCTGGCGGAGGATCGGCAAG 107 1.6625233064014915 No Hit TTGGACGGGACTTTGGACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA 90 1.3983840894965818 No Hit TTGGACGGGGATCCTCTGATAGCCATATCAACATCATGCGCTTCTCGTCG 88 1.3673088875077688 No Hit TTGGACGGGCAGGAGGATCCCTTGAATCTGGGAGGTGGAGGTTGCTGGGA 87 1.3517712865133624 No Hit TTGGACGGGATCGTCCCAAAGGAGGAAGGCAAAGCGAATCCAAAGGTGCT 80 1.2430080795525171 No Hit TTGGACGGGGATCCTGATCCCCACCACCAGGTAAAACGATCTTACGCTGC 77 1.1963952765692978 No Hit TTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGA 76 1.1808576755748912 No Hit TTGGACGGGATTGAAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 76 1.1808576755748912 No Hit TTGGACGGGGGGAATTCATCTGCGTGCGAAGAGGTGGCAGCCGTCTCGTT 74 1.1497824735860782 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGACTCGTCTGGCAGCATTT 58 0.9011808576755749 No Hit TTGGACGGGGACCTTCTCAGTACGCCCAGGTTGAAGTGGCATGTGCTTTT 57 0.8856432566811684 No Hit TTGGACGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 53 0.8234928527035427 No Hit TTGGACGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 48 0.7458048477315102 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGCAGCATTT 43 0.6681168427594779 No Hit TTGGACGGGGCGCATCCGCCAGGCTGCGACGCTGCGTTCTGGCCAGTTCA 41 0.6370416407706649 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCTCTGGCAGCATTT 41 0.6370416407706649 No Hit TTGGACGGGATTTCCAAATTGATACATAAATATTTATAATCATTCACACC 36 0.5593536357986327 No Hit TTGGACGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGCAGCATTTT 35 0.5438160348042262 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGCCGCATTT 24 0.3729024238657551 No Hit TTGGACGGGGAATCAAAACCAAAATCGGTGGAAGCATGAGAATCACCATT 24 0.3729024238657551 No Hit TTGGACGGGGGAATTCGTGGAGAAAGAAATGGCTCCTCTGGCAGCATTTT 21 0.32628962088253577 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCTCTGGCCGCATTT 19 0.2952144188937228 No Hit TTGGACGGGTAAAGCAGTGATATCAACGCAAATTGCAGTGCTTTCGACGG 16 0.2486016159105034 No Hit TTGGACGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCG 16 0.2486016159105034 No Hit TTGGACGGGAAGCTCTCGTTTGTAGAGTATCAATTCATGAGCAGCAGTAC 15 0.23306401491609696 No Hit TTGGACGGGACTTTGGACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15 0.23306401491609696 No Hit TTGGACGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14 0.2175264139216905 No Hit TTGGACGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGCCGCATTTT 13 0.20198881292728404 No Hit TTGGACGGGATCTCTGTCCCGGCTATAGACGTCCTTGCCAGGGACGCTGC 12 0.18645121193287756 No Hit TTGGACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12 0.18645121193287756 No Hit TTGGACGGGGCCTTAACACGCGCAGGTTATTTCTAACTTAAAAAAAAAAA 11 0.1709136109384711 No Hit TTGGACGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTGGACGGGA 11 0.1709136109384711 No Hit TTGGACGGGAAGCAGTAGTATCAACGCAGAATGCAATGCTTTGACGGGTT 10 0.15537600994406464 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGCCGCCTTT 9 0.13983840894965818 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGGAGCATTT 9 0.13983840894965818 No Hit TTGGACGGGAAGCAGAGGTATCAATGCTTTGGACGGGGAAAAAAAAAAAA 9 0.13983840894965818 No Hit TTGGACGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA 8 0.1243008079552517 No Hit TTGGACGGGCGTCATTTAAAAGGTAGATAATATACAATGGGCATTTTGGA 8 0.1243008079552517 No Hit TTGGACGGGGCTTTGGACGGGGCCGTGGTATCAACTGCTTTGGACGGGAA 8 0.1243008079552517 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCCCTGGGCGCATTT 8 0.1243008079552517 No Hit TTGGACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8 0.1243008079552517 No Hit TTGGACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7 0.10876320696084525 No Hit TTGGACGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTGGCGCC 7 0.10876320696084525 No Hit TTGGACGGGGAGTGCAGTGCTTTGGACGGGGGGCAAAAAAAAAAAAAAAA 7 0.10876320696084525 No Hit TTGGACGGGGGGAATTCGTGGAGAAAGAAATGGCTCCGCTGGCAGCATTT 7 0.10876320696084525 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.015537600994406464 0.0 0.0 0.0 0.0 12 0.04661280298321939 0.0 0.0 0.0 0.0 13 0.062150403977625855 0.0 0.0 0.0 0.0 14 0.13983840894965818 0.0 0.0 0.0 0.0 15 0.18645121193287756 0.0 0.0 0.0 0.0 16 0.23306401491609696 0.0 0.0 0.0 0.0 17 0.24860161591050342 0.0 0.0 0.0 0.0 18 0.2641392169049099 0.0 0.0 0.0 0.0 19 0.27967681789931637 0.0 0.0 0.0 0.0 20 0.3262896208825357 0.0 0.0 0.0 0.0 21 0.3262896208825357 0.0 0.0 0.0 0.0 22 0.4195152268489745 0.0 0.0 0.0 0.0 23 0.48166563082660035 0.0 0.0 0.0 0.0 24 0.5127408328154133 0.0 0.0 0.0 0.0 25 0.5282784338098198 0.0 0.0 0.0 0.0 26 0.5282784338098198 0.0 0.0 0.0 0.0 27 0.5748912367930391 0.0 0.0 0.0 0.0 28 0.6059664387818521 0.0 0.0 0.0 0.0 29 0.6215040397762586 0.0 0.0 0.0 0.0 30 0.6681168427594779 0.0 0.0 0.0 0.0 31 0.7458048477315102 0.0 0.0 0.0 0.0 32 0.7458048477315102 0.0 0.0 0.0 0.0 33 0.7768800497203232 0.0 0.0 0.0 0.0 34 0.7768800497203232 0.0 0.0 0.0 0.0 35 0.8079552517091361 0.0 0.0 0.0 0.0 36 0.8234928527035426 0.0 0.0 0.0 0.0 37 0.839030453697949 0.0 0.0 0.0 0.0 38 0.8545680546923555 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGAA 65 0.0 44.000004 5 GTAGATA 20 7.283648E-4 44.0 23 CTTTTCC 25 3.965133E-5 44.0 10 TGATGCT 40 6.315531E-9 44.0 38 CGTTCAC 40 6.315531E-9 44.0 35 CGCTGAT 20 7.283648E-4 44.0 23 TTTTGGA 20 7.283648E-4 44.0 44 TTCACTC 40 6.315531E-9 44.0 37 GTTGATG 40 6.315531E-9 44.0 36 GAGCGTG 20 7.283648E-4 44.0 21 ATGGGCA 20 7.283648E-4 44.0 37 TGGTTGA 40 6.315531E-9 44.0 34 ACTCGTG 20 7.283648E-4 44.0 42 GTGTTTT 20 7.283648E-4 44.0 35 CAATGGG 20 7.283648E-4 44.0 35 AACGCAG 20 7.283648E-4 44.0 23 TGCACAT 20 7.283648E-4 44.0 26 GGTGAAC 40 6.315531E-9 44.0 18 GTCATTT 20 7.283648E-4 44.0 11 GGCATTT 20 7.283648E-4 44.0 40 >>END_MODULE