SRR1527185_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527185_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2557721
Sequences flagged as poor quality	0
Sequence length	52
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCACTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	14424	0.5639395383624719	No Hit
TCACTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG	8616	0.3368623864760856	No Hit
TCACTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	8236	0.3220054102851718	No Hit
TCACTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCACTTGGGAAG	7528	0.29432451780315366	No Hit
TCACTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT	6827	0.2669173064614944	No Hit
TCACTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC	5690	0.22246366980604998	No Hit
TCACTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT	5024	0.19642486416618543	No Hit
TCACTTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG	4940	0.1931406904818782	No Hit
TCACTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA	4644	0.18156788797527174	No Hit
TCACTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT	4508	0.17625065439115525	No Hit
TCACTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC	4398	0.1719499507569434	No Hit
TCACTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG	4087	0.1597906886638535	No Hit
TCACTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC	3650	0.14270516604430272	No Hit
TCACTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT	3491	0.1364886944275783	No Hit
TCACTTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT	3419	0.1336736884124578	No Hit
TCACTTGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT	3018	0.1179956688004673	No Hit
TCACTTGGGACATTTTGTTTTTGAGACTGTATTCCCTAGCATATATCTCCTA	2768	0.10822134235907668	No Hit
TCACTTGGGAGGACGTGTTTATATTGAGTCACATTCAAGACCTGGGCTGGCC	2704	0.1057191147900807	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATAC	35	1.0202348E-7	46.000004	34
CGATGTA	35	1.0202348E-7	46.000004	40
AAACGAC	40	5.6152203E-9	46.0	36
ACGATAC	20	6.312913E-4	46.0	45
CGTACTA	20	6.312913E-4	46.0	23
CGATAGT	25	3.4183395E-5	46.0	19
ACGAATT	25	3.4183395E-5	46.0	28
TTGGGAT	28930	0.0	43.718285	5
TTGGGAC	17550	0.0	43.20855	5
TCACTTG	272725	0.0	43.013733	1
CTTGGGA	99660	0.0	42.949028	4
CACTTGG	272170	0.0	42.925674	2
ACTTGGG	267195	0.0	42.753944	3
TTGGGAG	35130	0.0	42.660973	5
CTTGGGG	135360	0.0	42.513298	4
TAAGGCG	65	0.0	42.46154	32
TGGGATA	3300	0.0	42.166664	6
TGGGATT	11460	0.0	42.126526	6
TTGGGGC	29420	0.0	42.07546	5
TTGGGGG	49260	0.0	41.797806	5